Gene annotation
Transcriptome id Sobic.007G120401.1
Synonym -
Functional annotation -
UniProt A0A1B6PHN3
Pfam PF01145
Panther DB PTHR10264 PTHR10264:SF93
NCBI CDD KOG2620; Prohibitins and stomatins of the PID superfamily
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT5G62740 : SPFH/Band 7/PHB domain-containing membrane-associated protein family
RAP-DB (Rice) LOC_Os08g30790.1 : hypersensitive-induced response protein, putative, expressed
MaizeGDB (Corn) Zm00025a044760 , Zm00025a030989 , Zm00025a013808
Brachypodium KQJ90377 , KQJ90376 , KQJ98191 , KQJ89947 , KQJ98193 , KQJ98192
Barley HORVU2Hr1G012690.2 , HORVU2Hr1G012690.3 , HORVU2Hr1G012690.1 , HORVU2Hr1G012690.6 , HORVU4Hr1G082240.6 , HORVU4Hr1G082240.2 , HORVU4Hr1G082240.3 , HORVU4Hr1G082240.1 , HORVU4Hr1G082240.7 , HORVU4Hr1G082240.4 , HORVU4Hr1G082240.5 , HORVU4Hr1G082240.8
Wheat TraesCS5A02G497400 , TraesCS4B02G325100 , TraesCS4D02G322000
Populus PNT09904 , PNT09905 , PNT09906


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G148200 auxin-repressed protein, putative, expressed -
2 Sobic.001G372500 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
3 Sobic.009G154600 glycosyl hydrolases family 17, putative, expressed -
4 Sobic.007G202800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
5 Sobic.004G275200 zinc-binding protein, putative, expressed -
6 Sobic.002G125900 ORM1, putative, expressed -
7 Sobic.001G191200 a marker of bud dormancy(PubMedID : 16443694)@auxin-repressed protein, putative, expressed -
8 Sobic.008G001400 expressed protein -
9 Sobic.002G273700 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
10 Sobic.001G423100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein K09562: HSPBP1, hsp70-interacting protein
11 Sobic.001G377000 auxin-repressed protein, putative, expressed -
12 Sobic.007G189500 - -
13 Sobic.009G233300 60S ribosomal protein L18a-1, putative, expressed -
14 Sobic.005G129400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.002G046800 transketolase, putative, expressed K00167: BCKDHB, 2-oxoisovalerate dehydrogenase E1 component beta subunit
16 Sobic.009G082200 TKL_IRAK_DUF26-lc22 - DUF26 kinases have homology to DUF26 containing loci, expressed -
17 Sobic.006G076800 serine/threonine-protein kinase receptor precursor, putative, expressed -
18 Sobic.001G078200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.001G045000 CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
20 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31


Gene co-expression network
sample Sobic007G120401 Sobic007G120401 Sobic007G148200 Sobic007G148200 Sobic007G120401--Sobic007G148200 Sobic001G372500 Sobic001G372500 Sobic007G120401--Sobic001G372500 Sobic009G154600 Sobic009G154600 Sobic007G120401--Sobic009G154600 Sobic007G202800 Sobic007G202800 Sobic007G120401--Sobic007G202800 Sobic004G275200 Sobic004G275200 Sobic007G120401--Sobic004G275200 Sobic002G125900 Sobic002G125900 Sobic007G120401--Sobic002G125900 Sobic001G191200 Sobic001G191200 Sobic007G120401--Sobic001G191200 Sobic008G001400 Sobic008G001400 Sobic007G120401--Sobic008G001400 Sobic002G273700 Sobic002G273700 Sobic007G120401--Sobic002G273700 Sobic001G377000 Sobic001G377000 Sobic007G148200--Sobic001G377000 Sobic007G148200--Sobic004G275200 Sobic002G226000 Sobic002G226000 Sobic007G148200--Sobic002G226000 Sobic006G152600 Sobic006G152600 Sobic007G148200--Sobic006G152600 Sobic001G293800 Sobic001G293800 Sobic007G148200--Sobic001G293800 Sobic007G148200--Sobic007G120401 Sobic004G153400 Sobic004G153400 Sobic007G148200--Sobic004G153400 Sobic002G046800 Sobic002G046800 Sobic007G148200--Sobic002G046800 Sobic004G153501 Sobic004G153501 Sobic007G148200--Sobic004G153501 Sobic009G233300 Sobic009G233300 Sobic001G372500--Sobic009G233300 Sobic001G372500--Sobic007G120401 Sobic003G413500 Sobic003G413500 Sobic001G372500--Sobic003G413500 Sobic009G137800 Sobic009G137800 Sobic001G372500--Sobic009G137800 Sobic001G387600 Sobic001G387600 Sobic001G372500--Sobic001G387600 Sobic007G189500 Sobic007G189500 Sobic001G372500--Sobic007G189500 Sobic006G273200 Sobic006G273200 Sobic001G372500--Sobic006G273200 Sobic003G309900 Sobic003G309900 Sobic001G372500--Sobic003G309900 Sobic006G194500 Sobic006G194500 Sobic001G372500--Sobic006G194500 Sobic009G154600--Sobic001G191200 Sobic003G107300 Sobic003G107300 Sobic009G154600--Sobic003G107300 Sobic001G423100 Sobic001G423100 Sobic009G154600--Sobic001G423100 Sobic008G148400 Sobic008G148400 Sobic009G154600--Sobic008G148400 Sobic010G258300 Sobic010G258300 Sobic009G154600--Sobic010G258300 Sobic003G406700 Sobic003G406700 Sobic009G154600--Sobic003G406700 Sobic003G222300 Sobic003G222300 Sobic009G154600--Sobic003G222300 Sobic001G031300 Sobic001G031300 Sobic009G154600--Sobic001G031300 Sobic009G213400 Sobic009G213400 Sobic009G154600--Sobic009G213400 Sobic007G202800--Sobic007G120401 Sobic005G209000 Sobic005G209000 Sobic007G202800--Sobic005G209000 Sobic007G202800--Sobic007G189500 Sobic001G087100 Sobic001G087100 Sobic007G202800--Sobic001G087100 Sobic001G240300 Sobic001G240300 Sobic007G202800--Sobic001G240300 Sobic007G202800--Sobic009G154600 Sobic010G057300 Sobic010G057300 Sobic007G202800--Sobic010G057300 Sobic006G228700 Sobic006G228700 Sobic007G202800--Sobic006G228700 Sobic010G083900 Sobic010G083900 Sobic007G202800--Sobic010G083900 Sobic004G275200--Sobic006G152600 Sobic004G275200--Sobic007G148200 Sobic004G275200--Sobic001G293800 Sobic008G094700 Sobic008G094700 Sobic004G275200--Sobic008G094700 Sobic002G130700 Sobic002G130700 Sobic004G275200--Sobic002G130700 Sobic003G308700 Sobic003G308700 Sobic004G275200--Sobic003G308700 Sobic004G275200--Sobic001G377000 Sobic005G129400 Sobic005G129400 Sobic004G275200--Sobic005G129400 Sobic009G080200 Sobic009G080200 Sobic004G275200--Sobic009G080200 Sobic006G263000 Sobic006G263000 Sobic002G125900--Sobic006G263000 Sobic002G125900--Sobic007G120401 Sobic001G351400 Sobic001G351400 Sobic002G125900--Sobic001G351400 Sobic002G404200 Sobic002G404200 Sobic002G125900--Sobic002G404200 Sobic002G040800 Sobic002G040800 Sobic002G125900--Sobic002G040800 Sobic002G125900--Sobic003G222300 Sobic008G146900 Sobic008G146900 Sobic002G125900--Sobic008G146900 Sobic004G210900 Sobic004G210900 Sobic002G125900--Sobic004G210900 Sobic003G314500 Sobic003G314500 Sobic002G125900--Sobic003G314500 Sobic001G191200--Sobic003G406700 Sobic001G078200 Sobic001G078200 Sobic001G191200--Sobic001G078200 Sobic001G191200--Sobic009G154600 Sobic001G191200--Sobic001G377000 Sobic001G191200--Sobic009G213400 Sobic005G085200 Sobic005G085200 Sobic001G191200--Sobic005G085200 Sobic001G191200--Sobic003G107300 Sobic001G191200--Sobic001G423100 Sobic001G225500 Sobic001G225500 Sobic001G191200--Sobic001G225500 Sobic008G001400--Sobic002G040800 Sobic010G113000 Sobic010G113000 Sobic008G001400--Sobic010G113000 Sobic008G001400--Sobic005G129400 Sobic004G175200 Sobic004G175200 Sobic008G001400--Sobic004G175200 Sobic008G001400--Sobic007G120401 Sobic008G001400--Sobic002G273700 Sobic002G174900 Sobic002G174900 Sobic008G001400--Sobic002G174900 Sobic003G206800 Sobic003G206800 Sobic008G001400--Sobic003G206800 Sobic009G082200 Sobic009G082200 Sobic008G001400--Sobic009G082200 Sobic007G054100 Sobic007G054100 Sobic002G273700--Sobic007G054100 Sobic002G273700--Sobic003G308700 Sobic004G340700 Sobic004G340700 Sobic002G273700--Sobic004G340700 Sobic002G373100 Sobic002G373100 Sobic002G273700--Sobic002G373100 Sobic002G273700--Sobic002G040800 Sobic002G273700--Sobic008G001400 Sobic002G273700--Sobic007G120401 Sobic002G273700--Sobic009G082200 Sobic006G042200 Sobic006G042200 Sobic002G273700--Sobic006G042200
Octagon: transcription factors


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