Gene annotation
Transcriptome id Sobic.002G273700.1
Synonym CYP71B2, Sb02g030730
Functional annotation Upregulated in cold susceptible sorghum under stress (PubMedID : 26645959)
cytochrome P450, putative, expressed
UniProt C5X664
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF108
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G13080 : cytochrome P450, family 71, subfamily B, polypeptide 2
RAP-DB (Rice) LOC_Os09g36080.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a014421 , Zm00025a014419 , Zm00025a022331
Brachypodium KQJ91155
Barley HORVU5Hr1G081270.1 , HORVU5Hr1G081210.1 , HORVU5Hr1G081260.1
Wheat TraesCS5D02G324400 , TraesCS5D02G323900 , TraesCS5B02G318600 , TraesCS5A02G317600 , TraesCS5A02G318100
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.002G273700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G054100 stress-induced protein, putative, expressed -
2 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
3 Sobic.004G340700 OsFBX70 - F-box domain containing protein, expressed -
4 Sobic.002G373100 strictosidine synthase, putative, expressed -
5 Sobic.002G040800 CAMK_CAMK_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
6 Sobic.008G001400 expressed protein -
7 Sobic.007G120401 - -
8 Sobic.009G082200 TKL_IRAK_DUF26-lc22 - DUF26 kinases have homology to DUF26 containing loci, expressed -
9 Sobic.006G042200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
10 Sobic.003G413500 expressed protein -
11 Sobic.004G068800 cytochrome P450 71D10, putative, expressed -
12 Sobic.001G318900 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.009G008100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
14 Sobic.006G195100 purine permease, putative, expressed -
15 Sobic.002G125900 ORM1, putative, expressed -
16 Sobic.006G143000 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
17 Sobic.004G275200 zinc-binding protein, putative, expressed -
18 Sobic.008G003900 - -
19 Sobic.002G073900 expressed protein -
20 Sobic.001G284800 histone H3, putative, expressed K11253: histone H3


Gene co-expression network
sample Sobic002G273700 Sobic002G273700 Sobic007G054100 Sobic007G054100 Sobic002G273700--Sobic007G054100 Sobic003G308700 Sobic003G308700 Sobic002G273700--Sobic003G308700 Sobic004G340700 Sobic004G340700 Sobic002G273700--Sobic004G340700 Sobic002G373100 Sobic002G373100 Sobic002G273700--Sobic002G373100 Sobic002G040800 Sobic002G040800 Sobic002G273700--Sobic002G040800 Sobic008G001400 Sobic008G001400 Sobic002G273700--Sobic008G001400 Sobic007G120401 Sobic007G120401 Sobic002G273700--Sobic007G120401 Sobic009G082200 Sobic009G082200 Sobic002G273700--Sobic009G082200 Sobic006G042200 Sobic006G042200 Sobic002G273700--Sobic006G042200 Sobic007G054100--Sobic003G308700 Sobic007G054100--Sobic006G042200 Sobic007G054100--Sobic002G273700 Sobic002G073900 Sobic002G073900 Sobic007G054100--Sobic002G073900 Sobic003G153800 Sobic003G153800 Sobic007G054100--Sobic003G153800 Sobic002G174900 Sobic002G174900 Sobic007G054100--Sobic002G174900 Sobic002G187801 Sobic002G187801 Sobic007G054100--Sobic002G187801 Sobic004G096300 Sobic004G096300 Sobic007G054100--Sobic004G096300 Sobic005G090600 Sobic005G090600 Sobic007G054100--Sobic005G090600 Sobic003G308700--Sobic002G073900 Sobic003G308700--Sobic007G054100 Sobic003G308700--Sobic002G174900 Sobic003G308700--Sobic002G273700 Sobic006G172900 Sobic006G172900 Sobic003G308700--Sobic006G172900 Sobic009G094800 Sobic009G094800 Sobic003G308700--Sobic009G094800 Sobic001G387600 Sobic001G387600 Sobic003G308700--Sobic001G387600 Sobic009G008100 Sobic009G008100 Sobic003G308700--Sobic009G008100 Sobic003G308700--Sobic002G187801 Sobic010G210700 Sobic010G210700 Sobic004G340700--Sobic010G210700 Sobic004G340700--Sobic002G273700 Sobic006G168000 Sobic006G168000 Sobic004G340700--Sobic006G168000 Sobic006G246200 Sobic006G246200 Sobic004G340700--Sobic006G246200 Sobic005G133166 Sobic005G133166 Sobic004G340700--Sobic005G133166 Sobic002G177300 Sobic002G177300 Sobic004G340700--Sobic002G177300 Sobic004G187300 Sobic004G187300 Sobic004G340700--Sobic004G187300 Sobic005G082700 Sobic005G082700 Sobic004G340700--Sobic005G082700 Sobic006G195100 Sobic006G195100 Sobic004G340700--Sobic006G195100 Sobic007G084300 Sobic007G084300 Sobic002G373100--Sobic007G084300 Sobic008G027200 Sobic008G027200 Sobic002G373100--Sobic008G027200 Sobic006G143000 Sobic006G143000 Sobic002G373100--Sobic006G143000 Sobic003G086900 Sobic003G086900 Sobic002G373100--Sobic003G086900 Sobic010G196500 Sobic010G196500 Sobic002G373100--Sobic010G196500 Sobic006G213500 Sobic006G213500 Sobic002G373100--Sobic006G213500 Sobic002G373100--Sobic002G273700 Sobic009G082000 Sobic009G082000 Sobic002G373100--Sobic009G082000 Sobic002G373100--Sobic003G308700 Sobic010G228700 Sobic010G228700 Sobic002G040800--Sobic010G228700 Sobic002G040800--Sobic009G094800 Sobic001G544500 Sobic001G544500 Sobic002G040800--Sobic001G544500 Sobic002G040800--Sobic002G174900 Sobic002G040800--Sobic008G001400 Sobic004G135300 Sobic004G135300 Sobic002G040800--Sobic004G135300 Sobic002G040800--Sobic006G042200 Sobic003G368800 Sobic003G368800 Sobic002G040800--Sobic003G368800 Sobic006G263000 Sobic006G263000 Sobic002G040800--Sobic006G263000 Sobic008G001400--Sobic002G040800 Sobic010G113000 Sobic010G113000 Sobic008G001400--Sobic010G113000 Sobic005G129400 Sobic005G129400 Sobic008G001400--Sobic005G129400 Sobic004G175200 Sobic004G175200 Sobic008G001400--Sobic004G175200 Sobic008G001400--Sobic007G120401 Sobic008G001400--Sobic002G273700 Sobic008G001400--Sobic002G174900 Sobic003G206800 Sobic003G206800 Sobic008G001400--Sobic003G206800 Sobic008G001400--Sobic009G082200 Sobic007G148200 Sobic007G148200 Sobic007G120401--Sobic007G148200 Sobic001G372500 Sobic001G372500 Sobic007G120401--Sobic001G372500 Sobic009G154600 Sobic009G154600 Sobic007G120401--Sobic009G154600 Sobic007G202800 Sobic007G202800 Sobic007G120401--Sobic007G202800 Sobic004G275200 Sobic004G275200 Sobic007G120401--Sobic004G275200 Sobic002G125900 Sobic002G125900 Sobic007G120401--Sobic002G125900 Sobic001G191200 Sobic001G191200 Sobic007G120401--Sobic001G191200 Sobic007G120401--Sobic008G001400 Sobic007G120401--Sobic002G273700 Sobic004G088100 Sobic004G088100 Sobic009G082200--Sobic004G088100 Sobic009G082200--Sobic002G040800 Sobic009G082200--Sobic009G154600 Sobic005G008001 Sobic005G008001 Sobic009G082200--Sobic005G008001 Sobic008G125600 Sobic008G125600 Sobic009G082200--Sobic008G125600 Sobic001G377000 Sobic001G377000 Sobic009G082200--Sobic001G377000 Sobic009G082200--Sobic002G273700 Sobic001G031300 Sobic001G031300 Sobic009G082200--Sobic001G031300 Sobic003G222300 Sobic003G222300 Sobic009G082200--Sobic003G222300 Sobic006G042200--Sobic004G135300 Sobic006G042200--Sobic007G054100 Sobic001G222250 Sobic001G222250 Sobic006G042200--Sobic001G222250 Sobic004G174900 Sobic004G174900 Sobic006G042200--Sobic004G174900 Sobic006G042200--Sobic008G125600 Sobic004G010101 Sobic004G010101 Sobic006G042200--Sobic004G010101 Sobic006G042200--Sobic009G008100 Sobic006G042200--Sobic002G073900 Sobic006G042200--Sobic002G040800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.