Gene annotation
Transcriptome id Sobic.004G340700.1
Synonym AtPP2-B10, Sb04g036820, PP2-B10
Functional annotation OsFBX70 - F-box domain containing protein, expressed
UniProt C5XV92
Pfam PF00646 PF14299
Panther DB PTHR32278 PTHR32278:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G02360 : phloem protein 2-B10
RAP-DB (Rice) LOC_Os02g56840.1 : OsFBX70 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a022559
Brachypodium -
Barley HORVU6Hr1G090010.2 , HORVU6Hr1G090000.1 , HORVU6Hr1G090000.2 , HORVU6Hr1G090000.5 , HORVU6Hr1G090000.4
Wheat TraesCS6D02G369100 , TraesCS6D02G369100 , TraesCS6B02G423500 , TraesCS6A02G384000 , TraesCS6D02G369200 , TraesCS6A02G384000 , TraesCS6D02G368900 , TraesCS6A02G383900 , TraesCS6B02G423400 , TraesCS6A02G384100 , TraesCS6D02G369000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G210700 NAD dependent epimerase/dehydratase family protein, putative, expressed -
2 Sobic.002G273700 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
3 Sobic.006G168000 AP2 domain containing protein, expressed K09286: EREBP-like factor
4 Sobic.006G246200 protein kinase, putative, expressed -
5 Sobic.005G133166 - -
6 Sobic.002G177300 cytochrome P450, putative, expressed -
7 Sobic.004G187300 zinc finger protein, putative, expressed -
8 Sobic.005G082700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
9 Sobic.006G195100 purine permease, putative, expressed -
10 Sobic.002G271600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
11 Sobic.006G113900 heavy metal associated domain containing protein, expressed -
12 Sobic.001G362001 Probable serine/threonineprotein kinase PBL15(PubMedID : 31721651) -
13 Sobic.002G241250 - -
14 Sobic.001G136300 nodulin family protein, putative, expressed -
15 Sobic.002G173900 hydroquinone glucosyltransferase, putative, expressed K08237: hydroquinone glucosyltransferase
16 Sobic.004G068800 cytochrome P450 71D10, putative, expressed -
17 Sobic.009G241500 expressed protein -
18 Sobic.007G054100 stress-induced protein, putative, expressed -
19 Sobic.002G354400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyol transporter 5, putative, expressed -
20 Sobic.003G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -


Gene co-expression network
sample Sobic004G340700 Sobic004G340700 Sobic010G210700 Sobic010G210700 Sobic004G340700--Sobic010G210700 Sobic002G273700 Sobic002G273700 Sobic004G340700--Sobic002G273700 Sobic006G168000 Sobic006G168000 Sobic004G340700--Sobic006G168000 Sobic006G246200 Sobic006G246200 Sobic004G340700--Sobic006G246200 Sobic005G133166 Sobic005G133166 Sobic004G340700--Sobic005G133166 Sobic002G177300 Sobic002G177300 Sobic004G340700--Sobic002G177300 Sobic004G187300 Sobic004G187300 Sobic004G340700--Sobic004G187300 Sobic005G082700 Sobic005G082700 Sobic004G340700--Sobic005G082700 Sobic006G195100 Sobic006G195100 Sobic004G340700--Sobic006G195100 Sobic010G210700--Sobic005G133166 Sobic010G210700--Sobic006G168000 Sobic010G210700--Sobic005G082700 Sobic010G210700--Sobic004G187300 Sobic002G173900 Sobic002G173900 Sobic010G210700--Sobic002G173900 Sobic009G241500 Sobic009G241500 Sobic010G210700--Sobic009G241500 Sobic008G181801 Sobic008G181801 Sobic010G210700--Sobic008G181801 Sobic010G210700--Sobic006G246200 Sobic002G354400 Sobic002G354400 Sobic010G210700--Sobic002G354400 Sobic007G054100 Sobic007G054100 Sobic002G273700--Sobic007G054100 Sobic003G308700 Sobic003G308700 Sobic002G273700--Sobic003G308700 Sobic002G273700--Sobic004G340700 Sobic002G373100 Sobic002G373100 Sobic002G273700--Sobic002G373100 Sobic002G040800 Sobic002G040800 Sobic002G273700--Sobic002G040800 Sobic008G001400 Sobic008G001400 Sobic002G273700--Sobic008G001400 Sobic007G120401 Sobic007G120401 Sobic002G273700--Sobic007G120401 Sobic009G082200 Sobic009G082200 Sobic002G273700--Sobic009G082200 Sobic006G042200 Sobic006G042200 Sobic002G273700--Sobic006G042200 Sobic006G168000--Sobic006G246200 Sobic006G168000--Sobic009G241500 Sobic006G168000--Sobic005G082700 Sobic004G220600 Sobic004G220600 Sobic006G168000--Sobic004G220600 Sobic006G168000--Sobic005G133166 Sobic006G168000--Sobic008G181801 Sobic006G168000--Sobic010G210700 Sobic001G136300 Sobic001G136300 Sobic006G168000--Sobic001G136300 Sobic009G241400 Sobic009G241400 Sobic006G168000--Sobic009G241400 Sobic006G246200--Sobic009G241500 Sobic006G246200--Sobic001G136300 Sobic006G246200--Sobic005G082700 Sobic001G362001 Sobic001G362001 Sobic006G246200--Sobic001G362001 Sobic006G246200--Sobic006G168000 Sobic004G181200 Sobic004G181200 Sobic006G246200--Sobic004G181200 Sobic009G121600 Sobic009G121600 Sobic006G246200--Sobic009G121600 Sobic005G226100 Sobic005G226100 Sobic006G246200--Sobic005G226100 Sobic002G241250 Sobic002G241250 Sobic006G246200--Sobic002G241250 Sobic005G133166--Sobic005G082700 SobicK044407 SobicK044407 Sobic005G133166--SobicK044407 Sobic005G133166--Sobic008G181801 Sobic001G012000 Sobic001G012000 Sobic005G133166--Sobic001G012000 Sobic005G133166--Sobic010G210700 Sobic005G133166--Sobic002G173900 Sobic005G085500 Sobic005G085500 Sobic005G133166--Sobic005G085500 Sobic006G045000 Sobic006G045000 Sobic005G133166--Sobic006G045000 Sobic005G133166--Sobic006G168000 Sobic002G177300--Sobic006G168000 Sobic002G177300--Sobic002G354400 Sobic002G177300--Sobic005G133166 Sobic002G177300--Sobic006G246200 Sobic002G177300--Sobic010G210700 Sobic002G177300--Sobic001G362001 Sobic002G177300--Sobic004G340700 Sobic002G177300--Sobic009G241500 Sobic002G177300--Sobic005G082700 Sobic004G195800 Sobic004G195800 Sobic004G187300--Sobic004G195800 Sobic003G153800 Sobic003G153800 Sobic004G187300--Sobic003G153800 Sobic004G187300--SobicK044407 Sobic001G410450 Sobic001G410450 Sobic004G187300--Sobic001G410450 Sobic004G187300--Sobic001G012000 Sobic004G187300--Sobic008G181801 SobicK020500 SobicK020500 Sobic004G187300--SobicK020500 Sobic002G209100 Sobic002G209100 Sobic004G187300--Sobic002G209100 Sobic009G205600 Sobic009G205600 Sobic004G187300--Sobic009G205600 Sobic005G082700--Sobic009G241500 Sobic005G082700--Sobic006G246200 Sobic005G082700--Sobic008G181801 Sobic005G082700--Sobic001G136300 Sobic005G082700--Sobic005G226100 Sobic005G082700--Sobic005G133166 Sobic004G052500 Sobic004G052500 Sobic005G082700--Sobic004G052500 Sobic008G183300 Sobic008G183300 Sobic005G082700--Sobic008G183300 Sobic003G037100 Sobic003G037100 Sobic005G082700--Sobic003G037100 Sobic009G085900 Sobic009G085900 Sobic006G195100--Sobic009G085900 Sobic006G195100--Sobic002G273700 Sobic004G068800 Sobic004G068800 Sobic006G195100--Sobic004G068800 Sobic002G271600 Sobic002G271600 Sobic006G195100--Sobic002G271600 Sobic002G155900 Sobic002G155900 Sobic006G195100--Sobic002G155900 Sobic006G195100--Sobic004G340700 Sobic006G195100--Sobic010G210700 Sobic006G195100--Sobic006G168000 Sobic006G195100--Sobic002G173900
Octagon: transcription factors


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