Gene annotation
Transcriptome id Sobic.006G113900.1,Sobic.006G113900.2
Synonym Sb06g019530
Functional annotation heavy metal associated domain containing protein, expressed
UniProt C5YAA1 , A0A1B6PLH1
Pfam -
Panther DB PTHR22814 PTHR22814:SF122
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48290 : Copper transport protein family,Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os04g39010.1 : heavy metal associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a056261 , Zm00025a011056 , Zm00025a011057
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G136300 nodulin family protein, putative, expressed -
2 Sobic.006G246200 protein kinase, putative, expressed -
3 Sobic.001G146500 OsSAUR17 - Auxin-responsive SAUR gene family member, expressed -
4 Sobic.008G183300 thaumatin, putative, expressed -
5 Sobic.003G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
6 Sobic.005G082700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
7 Sobic.006G168000 AP2 domain containing protein, expressed K09286: EREBP-like factor
8 Sobic.009G241500 expressed protein -
9 Sobic.006G003700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G381300 WRKY79, expressed -
11 Sobic.004G052500 - -
12 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
13 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
14 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
15 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
16 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
17 Sobic.010G045000 VQ domain containing protein, putative -
18 Sobic.006G229500 receptor-like kinase, putative, expressed -
19 Sobic.005G171100 - -
20 Sobic.004G181200 RING-H2 finger protein ATL3F, putative, expressed -


Gene co-expression network
sample Sobic006G113900 Sobic006G113900 Sobic001G136300 Sobic001G136300 Sobic006G113900--Sobic001G136300 Sobic006G246200 Sobic006G246200 Sobic006G113900--Sobic006G246200 Sobic001G146500 Sobic001G146500 Sobic006G113900--Sobic001G146500 Sobic008G183300 Sobic008G183300 Sobic006G113900--Sobic008G183300 Sobic003G291700 Sobic003G291700 Sobic006G113900--Sobic003G291700 Sobic005G082700 Sobic005G082700 Sobic006G113900--Sobic005G082700 Sobic006G168000 Sobic006G168000 Sobic006G113900--Sobic006G168000 Sobic009G241500 Sobic009G241500 Sobic006G113900--Sobic009G241500 Sobic006G003700 Sobic006G003700 Sobic006G113900--Sobic006G003700 Sobic001G136300--Sobic006G246200 Sobic001G136300--Sobic005G082700 Sobic001G136300--Sobic009G241500 Sobic001G136300--Sobic006G113900 Sobic007G157100 Sobic007G157100 Sobic001G136300--Sobic007G157100 Sobic001G381300 Sobic001G381300 Sobic001G136300--Sobic001G381300 Sobic001G136300--Sobic001G146500 Sobic005G226100 Sobic005G226100 Sobic001G136300--Sobic005G226100 Sobic008G162201 Sobic008G162201 Sobic001G136300--Sobic008G162201 Sobic006G246200--Sobic009G241500 Sobic006G246200--Sobic001G136300 Sobic006G246200--Sobic005G082700 Sobic001G362001 Sobic001G362001 Sobic006G246200--Sobic001G362001 Sobic006G246200--Sobic006G168000 Sobic004G181200 Sobic004G181200 Sobic006G246200--Sobic004G181200 Sobic009G121600 Sobic009G121600 Sobic006G246200--Sobic009G121600 Sobic006G246200--Sobic005G226100 Sobic002G241250 Sobic002G241250 Sobic006G246200--Sobic002G241250 Sobic001G259500 Sobic001G259500 Sobic001G146500--Sobic001G259500 Sobic010G018300 Sobic010G018300 Sobic001G146500--Sobic010G018300 Sobic001G146500--Sobic002G241250 Sobic004G052500 Sobic004G052500 Sobic001G146500--Sobic004G052500 Sobic001G146400 Sobic001G146400 Sobic001G146500--Sobic001G146400 Sobic008G183300--Sobic004G052500 Sobic008G183300--Sobic001G259500 Sobic008G183300--Sobic005G082700 Sobic006G113400 Sobic006G113400 Sobic008G183300--Sobic006G113400 Sobic008G183300--Sobic006G246200 Sobic010G045000 Sobic010G045000 Sobic003G291700--Sobic010G045000 Sobic008G060300 Sobic008G060300 Sobic003G291700--Sobic008G060300 Sobic003G291700--Sobic006G113900 Sobic003G291700--Sobic005G082700 Sobic003G291700--Sobic001G381300 Sobic005G193600 Sobic005G193600 Sobic003G291700--Sobic005G193600 Sobic003G258700 Sobic003G258700 Sobic003G291700--Sobic003G258700 Sobic006G229500 Sobic006G229500 Sobic003G291700--Sobic006G229500 Sobic003G376200 Sobic003G376200 Sobic003G291700--Sobic003G376200 Sobic005G082700--Sobic009G241500 Sobic005G082700--Sobic006G246200 Sobic008G181801 Sobic008G181801 Sobic005G082700--Sobic008G181801 Sobic005G082700--Sobic001G136300 Sobic005G082700--Sobic005G226100 Sobic005G133166 Sobic005G133166 Sobic005G082700--Sobic005G133166 Sobic005G082700--Sobic004G052500 Sobic005G082700--Sobic008G183300 Sobic003G037100 Sobic003G037100 Sobic005G082700--Sobic003G037100 Sobic006G168000--Sobic006G246200 Sobic006G168000--Sobic009G241500 Sobic006G168000--Sobic005G082700 Sobic004G220600 Sobic004G220600 Sobic006G168000--Sobic004G220600 Sobic006G168000--Sobic005G133166 Sobic006G168000--Sobic008G181801 Sobic010G210700 Sobic010G210700 Sobic006G168000--Sobic010G210700 Sobic006G168000--Sobic001G136300 Sobic009G241400 Sobic009G241400 Sobic006G168000--Sobic009G241400 Sobic009G241500--Sobic008G181801 Sobic009G241500--Sobic005G082700 Sobic009G241500--Sobic005G226100 Sobic009G241500--Sobic006G246200 Sobic009G241500--Sobic001G259500 Sobic004G158050 Sobic004G158050 Sobic006G003700--Sobic004G158050 Sobic006G003700--Sobic006G229500 Sobic002G195300 Sobic002G195300 Sobic006G003700--Sobic002G195300 Sobic006G003700--Sobic005G193600 Sobic002G169200 Sobic002G169200 Sobic006G003700--Sobic002G169200 Sobic007G037800 Sobic007G037800 Sobic006G003700--Sobic007G037800 Sobic006G003700--Sobic001G381300 Sobic005G193500 Sobic005G193500 Sobic006G003700--Sobic005G193500 Sobic006G003700--Sobic001G146500
Octagon: transcription factors


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