Gene annotation
Transcriptome id Sobic.006G003700.2,Sobic.006G003700.1
Synonym Sb06g000530
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5YBA5 , A0A1Z5RBT7
Pfam PF07690
Panther DB PTHR23294 PTHR23294:SF25
NCBI CDD KOG3098; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G18010 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os04g01520.1 : expressed protein
MaizeGDB (Corn) Zm00025a055486
Brachypodium -
Barley HORVU2Hr1G005470.3 , HORVU2Hr1G005470.1 , HORVU2Hr1G005470.6 , HORVU2Hr1G005470.7 , HORVU2Hr1G005470.4 , HORVU2Hr1G005470.5 , HORVU2Hr1G005470.8 , HORVU2Hr1G005470.9 , HORVU2Hr1G005470.10
Wheat TraesCS6D02G345200 , TraesCS6A02G361800 , TraesCS2B02G049700 , TraesCS2D02G035700 , TraesCS2A02G036400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G158050 - -
2 Sobic.006G229500 receptor-like kinase, putative, expressed -
3 Sobic.002G195300 - -
4 Sobic.005G193600 3 Ketoacyl CoA synthetase 2 KCS2 (fatty acid elongase) (At)(PubMedID : 27208977)@3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
5 Sobic.002G169200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK51 - OsWAK receptor-like protein kinase, expressed -
6 Sobic.007G037800 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
7 Sobic.001G381300 WRKY79, expressed -
8 Sobic.005G193500 receptor-like kinase, putative, expressed -
9 Sobic.001G146500 OsSAUR17 - Auxin-responsive SAUR gene family member, expressed -
10 Sobic.006G113900 heavy metal associated domain containing protein, expressed -
11 Sobic.010G045000 VQ domain containing protein, putative -
12 Sobic.001G136300 nodulin family protein, putative, expressed -
13 Sobic.004G019400 Protein terpene synthase 14 (At)(PubMedID : 27208977)@"Protein terpene synthase 14, S-linalool synthase (Os)"(PubMedID : 27208977)@terpene synthase, putative, expressed -
14 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -
15 Sobic.003G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
16 Sobic.009G252100 expressed protein -
17 Sobic.007G129201 - -
18 Sobic.007G215700 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
19 Sobic.006G246200 protein kinase, putative, expressed -
20 Sobic.008G060200 receptor-like protein kinase 5 precursor, putative, expressed -


Gene co-expression network
sample Sobic006G003700 Sobic006G003700 Sobic004G158050 Sobic004G158050 Sobic006G003700--Sobic004G158050 Sobic006G229500 Sobic006G229500 Sobic006G003700--Sobic006G229500 Sobic002G195300 Sobic002G195300 Sobic006G003700--Sobic002G195300 Sobic005G193600 Sobic005G193600 Sobic006G003700--Sobic005G193600 Sobic002G169200 Sobic002G169200 Sobic006G003700--Sobic002G169200 Sobic007G037800 Sobic007G037800 Sobic006G003700--Sobic007G037800 Sobic001G381300 Sobic001G381300 Sobic006G003700--Sobic001G381300 Sobic005G193500 Sobic005G193500 Sobic006G003700--Sobic005G193500 Sobic001G146500 Sobic001G146500 Sobic006G003700--Sobic001G146500 Sobic004G158050--Sobic006G003700 Sobic004G158050--Sobic001G381300 Sobic004G158050--Sobic005G193600 Sobic004G158050--Sobic002G195300 Sobic004G158050--Sobic006G229500 Sobic001G339300 Sobic001G339300 Sobic004G158050--Sobic001G339300 Sobic007G129201 Sobic007G129201 Sobic004G158050--Sobic007G129201 Sobic004G158050--Sobic007G037800 Sobic004G158050--Sobic002G169200 Sobic006G229500--Sobic005G193600 Sobic006G229500--Sobic006G003700 Sobic006G229500--Sobic001G381300 Sobic010G045000 Sobic010G045000 Sobic006G229500--Sobic010G045000 Sobic008G181801 Sobic008G181801 Sobic006G229500--Sobic008G181801 Sobic003G291700 Sobic003G291700 Sobic006G229500--Sobic003G291700 Sobic005G226100 Sobic005G226100 Sobic006G229500--Sobic005G226100 Sobic009G241500 Sobic009G241500 Sobic006G229500--Sobic009G241500 Sobic006G229500--Sobic004G158050 Sobic005G065500 Sobic005G065500 Sobic002G195300--Sobic005G065500 Sobic002G195300--Sobic006G003700 Sobic004G223500 Sobic004G223500 Sobic002G195300--Sobic004G223500 Sobic002G195200 Sobic002G195200 Sobic002G195300--Sobic002G195200 Sobic004G245300 Sobic004G245300 Sobic002G195300--Sobic004G245300 Sobic010G157000 Sobic010G157000 Sobic002G195300--Sobic010G157000 Sobic002G195300--Sobic004G158050 Sobic005G217900 Sobic005G217900 Sobic002G195300--Sobic005G217900 Sobic007G215700 Sobic007G215700 Sobic002G195300--Sobic007G215700 Sobic009G252100 Sobic009G252100 Sobic005G193600--Sobic009G252100 Sobic008G060300 Sobic008G060300 Sobic005G193600--Sobic008G060300 Sobic001G012000 Sobic001G012000 Sobic005G193600--Sobic001G012000 Sobic001G201800 Sobic001G201800 Sobic005G193600--Sobic001G201800 Sobic005G193600--Sobic008G181801 Sobic005G193600--Sobic006G229500 SobicK044407 SobicK044407 Sobic005G193600--SobicK044407 Sobic005G193600--Sobic001G381300 Sobic005G193600--Sobic005G193500 Sobic002G169200--Sobic006G003700 Sobic006G113400 Sobic006G113400 Sobic002G169200--Sobic006G113400 Sobic001G136300 Sobic001G136300 Sobic002G169200--Sobic001G136300 Sobic004G181200 Sobic004G181200 Sobic002G169200--Sobic004G181200 Sobic004G160300 Sobic004G160300 Sobic002G169200--Sobic004G160300 Sobic002G169200--Sobic004G158050 Sobic002G169200--Sobic005G193600 Sobic006G246200 Sobic006G246200 Sobic002G169200--Sobic006G246200 Sobic002G169200--Sobic001G146500 Sobic007G037800--Sobic009G252100 Sobic009G202400 Sobic009G202400 Sobic007G037800--Sobic009G202400 Sobic004G019400 Sobic004G019400 Sobic007G037800--Sobic004G019400 Sobic004G210601 Sobic004G210601 Sobic007G037800--Sobic004G210601 Sobic008G060200 Sobic008G060200 Sobic007G037800--Sobic008G060200 Sobic007G037800--Sobic008G060300 Sobic005G093300 Sobic005G093300 Sobic007G037800--Sobic005G093300 Sobic007G037800--Sobic007G129201 Sobic007G037800--Sobic005G193500 Sobic001G381300--Sobic005G226100 Sobic001G381300--Sobic005G193600 Sobic001G381300--Sobic008G181801 Sobic001G381300--Sobic006G246200 Sobic001G381300--Sobic001G146500 Sobic001G381300--Sobic009G241500 Sobic009G121600 Sobic009G121600 Sobic001G381300--Sobic009G121600 Sobic003G037100 Sobic003G037100 Sobic001G381300--Sobic003G037100 Sobic001G381300--Sobic006G229500 Sobic005G193500--Sobic005G193600 Sobic005G193500--Sobic008G060300 Sobic005G193500--Sobic009G252100 Sobic005G193500--Sobic007G129201 Sobic005G193500--Sobic007G037800 Sobic005G193500--Sobic004G019400 Sobic002G108400 Sobic002G108400 Sobic005G193500--Sobic002G108400 Sobic005G186500 Sobic005G186500 Sobic005G193500--Sobic005G186500 Sobic003G366100 Sobic003G366100 Sobic005G193500--Sobic003G366100 Sobic001G259500 Sobic001G259500 Sobic001G146500--Sobic001G259500 Sobic010G018300 Sobic010G018300 Sobic001G146500--Sobic010G018300 Sobic002G241250 Sobic002G241250 Sobic001G146500--Sobic002G241250 Sobic004G052500 Sobic004G052500 Sobic001G146500--Sobic004G052500 Sobic001G146400 Sobic001G146400 Sobic001G146500--Sobic001G146400
Octagon: transcription factors


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