Gene annotation
Transcriptome id Sobic.006G229500.2,Sobic.006G229500.1
Synonym RK3, Sb06g029760, ARK3
Functional annotation receptor-like kinase, putative, expressed
UniProt A0A1Z5RF74 , C5YGN7
Pfam PF08276 PF00954 PF01453 PF07714 PF08276 PF00954 PF01453 PF00069
Panther DB PTHR27002 PTHR27002:SF87
NCBI CDD KOG1187; Serine/threonine protein kinase KOG2345Serine/threonine protein kinase/TGF-beta stimulated factor KOG0580Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G21380 : receptor kinase 3
RAP-DB (Rice) LOC_Os04g54020.1 : receptor-like kinase, putative, expressed
MaizeGDB (Corn) Zm00025a009644 , Zm00025a009642 , Zm00025a057124 , Zm00025a057136 , Zm00025a047960
Brachypodium PNT61934 , PNT65692 , KQJ92830 , KQJ92829
Barley HORVU2Hr1G117360.5 , HORVU2Hr1G117360.25 , HORVU2Hr1G117360.27 , HORVU2Hr1G117360.26 , HORVU2Hr1G117360.21 , HORVU2Hr1G117360.20 , HORVU2Hr1G117360.23 , HORVU2Hr1G117360.22 , HORVU2Hr1G117360.11 , HORVU2Hr1G117360.12 , HORVU2Hr1G117360.15
Wheat TraesCS2A02G534400 , TraesCS2A02G534400 , TraesCS2A02G534400 , TraesCS2A02G534400 , TraesCS2D02G538500 , TraesCS2B02G510900 , TraesCS2B02G510900 , TraesCS2B02G510900 , TraesCS2B02G511200 , TraesCS2B02G568000 , TraesCS2B02G568000 , TraesCS2A02G537200 , TraesCS2B02G565000 , TraesCS2B02G565000 , TraesCS2B02G565000 , TraesCS2B02G565000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G193600 3 Ketoacyl CoA synthetase 2 KCS2 (fatty acid elongase) (At)(PubMedID : 27208977)@3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
2 Sobic.006G003700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G381300 WRKY79, expressed -
4 Sobic.010G045000 VQ domain containing protein, putative -
5 Sobic.008G181801 - -
6 Sobic.003G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
7 Sobic.005G226100 ZOS11-10 - C2H2 zinc finger protein, expressed -
8 Sobic.009G241500 expressed protein -
9 Sobic.004G158050 - -
10 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
11 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -
12 Sobic.001G136300 nodulin family protein, putative, expressed -
13 Sobic.001G146500 OsSAUR17 - Auxin-responsive SAUR gene family member, expressed -
14 Sobic.K044407 - -
15 Sobic.009G252100 expressed protein -
16 Sobic.005G082700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
17 Sobic.006G246200 protein kinase, putative, expressed -
18 Sobic.006G113900 heavy metal associated domain containing protein, expressed -
19 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
20 Sobic.005G193500 receptor-like kinase, putative, expressed -


Gene co-expression network
sample Sobic006G229500 Sobic006G229500 Sobic005G193600 Sobic005G193600 Sobic006G229500--Sobic005G193600 Sobic006G003700 Sobic006G003700 Sobic006G229500--Sobic006G003700 Sobic001G381300 Sobic001G381300 Sobic006G229500--Sobic001G381300 Sobic010G045000 Sobic010G045000 Sobic006G229500--Sobic010G045000 Sobic008G181801 Sobic008G181801 Sobic006G229500--Sobic008G181801 Sobic003G291700 Sobic003G291700 Sobic006G229500--Sobic003G291700 Sobic005G226100 Sobic005G226100 Sobic006G229500--Sobic005G226100 Sobic009G241500 Sobic009G241500 Sobic006G229500--Sobic009G241500 Sobic004G158050 Sobic004G158050 Sobic006G229500--Sobic004G158050 Sobic009G252100 Sobic009G252100 Sobic005G193600--Sobic009G252100 Sobic008G060300 Sobic008G060300 Sobic005G193600--Sobic008G060300 Sobic001G012000 Sobic001G012000 Sobic005G193600--Sobic001G012000 Sobic001G201800 Sobic001G201800 Sobic005G193600--Sobic001G201800 Sobic005G193600--Sobic008G181801 Sobic005G193600--Sobic006G229500 SobicK044407 SobicK044407 Sobic005G193600--SobicK044407 Sobic005G193600--Sobic001G381300 Sobic005G193500 Sobic005G193500 Sobic005G193600--Sobic005G193500 Sobic006G003700--Sobic004G158050 Sobic006G003700--Sobic006G229500 Sobic002G195300 Sobic002G195300 Sobic006G003700--Sobic002G195300 Sobic006G003700--Sobic005G193600 Sobic002G169200 Sobic002G169200 Sobic006G003700--Sobic002G169200 Sobic007G037800 Sobic007G037800 Sobic006G003700--Sobic007G037800 Sobic006G003700--Sobic001G381300 Sobic006G003700--Sobic005G193500 Sobic001G146500 Sobic001G146500 Sobic006G003700--Sobic001G146500 Sobic001G381300--Sobic005G226100 Sobic001G381300--Sobic005G193600 Sobic001G381300--Sobic008G181801 Sobic006G246200 Sobic006G246200 Sobic001G381300--Sobic006G246200 Sobic001G381300--Sobic001G146500 Sobic001G381300--Sobic009G241500 Sobic009G121600 Sobic009G121600 Sobic001G381300--Sobic009G121600 Sobic003G037100 Sobic003G037100 Sobic001G381300--Sobic003G037100 Sobic001G381300--Sobic006G229500 Sobic010G045000--Sobic003G291700 Sobic010G045000--Sobic006G229500 Sobic010G045000--Sobic005G193600 Sobic010G045000--Sobic009G252100 Sobic008G060200 Sobic008G060200 Sobic010G045000--Sobic008G060200 Sobic010G045000--Sobic008G060300 Sobic005G171100 Sobic005G171100 Sobic010G045000--Sobic005G171100 Sobic010G045000--Sobic006G003700 Sobic010G045000--Sobic001G381300 Sobic008G181801--SobicK044407 Sobic008G181801--Sobic009G241500 Sobic008G181801--Sobic001G012000 Sobic006G045000 Sobic006G045000 Sobic008G181801--Sobic006G045000 Sobic008G181801--Sobic005G226100 Sobic005G085500 Sobic005G085500 Sobic008G181801--Sobic005G085500 Sobic003G310200 Sobic003G310200 Sobic008G181801--Sobic003G310200 Sobic005G082700 Sobic005G082700 Sobic008G181801--Sobic005G082700 Sobic008G181801--Sobic003G037100 Sobic003G291700--Sobic010G045000 Sobic003G291700--Sobic008G060300 Sobic006G113900 Sobic006G113900 Sobic003G291700--Sobic006G113900 Sobic003G291700--Sobic005G082700 Sobic003G291700--Sobic001G381300 Sobic003G291700--Sobic005G193600 Sobic003G258700 Sobic003G258700 Sobic003G291700--Sobic003G258700 Sobic003G291700--Sobic006G229500 Sobic003G376200 Sobic003G376200 Sobic003G291700--Sobic003G376200 Sobic005G226100--Sobic008G181801 Sobic005G226100--Sobic009G241500 Sobic005G226100--Sobic003G037100 Sobic005G226100--Sobic001G381300 Sobic002G269032 Sobic002G269032 Sobic005G226100--Sobic002G269032 Sobic005G226100--Sobic009G121600 Sobic005G226100--Sobic005G082700 Sobic005G226100--Sobic006G246200 Sobic001G259500 Sobic001G259500 Sobic005G226100--Sobic001G259500 Sobic009G241500--Sobic008G181801 Sobic009G241500--Sobic005G082700 Sobic009G241500--Sobic005G226100 Sobic009G241500--Sobic006G246200 Sobic009G241500--Sobic001G259500 Sobic004G158050--Sobic006G003700 Sobic004G158050--Sobic001G381300 Sobic004G158050--Sobic005G193600 Sobic004G158050--Sobic002G195300 Sobic004G158050--Sobic006G229500 Sobic001G339300 Sobic001G339300 Sobic004G158050--Sobic001G339300 Sobic007G129201 Sobic007G129201 Sobic004G158050--Sobic007G129201 Sobic004G158050--Sobic007G037800 Sobic004G158050--Sobic002G169200
Octagon: transcription factors


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