Gene annotation
Transcriptome id Sobic.001G201800.1
Synonym Sb01g017800
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transferase family protein, putative, expressed
UniProt C5WWE4
Pfam PF02458
Panther DB PTHR31642 PTHR31642:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT5G17540 : HXXXD-type acyl-transferase family protein
RAP-DB (Rice) LOC_Os10g35950.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a006408 , Zm00025a030609 , Zm00025a051415 , Zm00025a050313
Brachypodium KQJ97350
Barley HORVU5Hr1G089050.4 , HORVU5Hr1G089050.3 , HORVU5Hr1G089050.1 , HORVU1Hr1G045690.5 , HORVU1Hr1G045690.4 , HORVU1Hr1G045690.6 , HORVU1Hr1G045690.1 , HORVU1Hr1G045690.3 , HORVU1Hr1G045690.2 , HORVU1Hr1G045700.2 , HORVU1Hr1G045700.1
Wheat TraesCS1A02G173800 , TraesCS5D02G371200 , TraesCS5A02G362300 , TraesCS7D02G020900 , TraesCS1D02G165000 , TraesCS1D02G164900 , TraesCS1B02G190600
Populus -


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cDNA sequences
Sobic.001G201800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase
2 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
4 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
5 Sobic.009G252100 expressed protein -
6 Sobic.002G202700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed -
7 Sobic.006G045000 drought-induced protein 1, putative, expressed -
8 Sobic.001G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
9 Sobic.002G108400 cytochrome P450, putative, expressed -
10 Sobic.005G193600 3 Ketoacyl CoA synthetase 2 KCS2 (fatty acid elongase) (At)(PubMedID : 27208977)@3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
11 Sobic.K044407 - -
12 Sobic.005G182701 - -
13 Sobic.006G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
14 Sobic.003G388400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
15 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
16 Sobic.002G041800 gibberellin receptor GID1L2, putative, expressed -
17 Sobic.007G055600 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K14174: beta-farnesene/exo-alpha-bergamotene synthase
18 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -
19 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
20 Sobic.004G195800 heavy metal associated domain containing protein, expressed -


Gene co-expression network
sample Sobic001G201800 Sobic001G201800 Sobic004G078600 Sobic004G078600 Sobic001G201800--Sobic004G078600 Sobic009G115400 Sobic009G115400 Sobic001G201800--Sobic009G115400 Sobic002G423600 Sobic002G423600 Sobic001G201800--Sobic002G423600 Sobic001G012000 Sobic001G012000 Sobic001G201800--Sobic001G012000 Sobic009G252100 Sobic009G252100 Sobic001G201800--Sobic009G252100 Sobic002G202700 Sobic002G202700 Sobic001G201800--Sobic002G202700 Sobic006G045000 Sobic006G045000 Sobic001G201800--Sobic006G045000 Sobic001G056400 Sobic001G056400 Sobic001G201800--Sobic001G056400 Sobic002G108400 Sobic002G108400 Sobic001G201800--Sobic002G108400 Sobic004G078600--Sobic001G201800 Sobic004G078600--Sobic002G423600 Sobic004G078600--Sobic009G115400 Sobic002G041800 Sobic002G041800 Sobic004G078600--Sobic002G041800 Sobic009G075100 Sobic009G075100 Sobic004G078600--Sobic009G075100 Sobic005G182701 Sobic005G182701 Sobic004G078600--Sobic005G182701 Sobic004G078600--Sobic001G012000 Sobic004G078600--Sobic009G252100 Sobic007G055600 Sobic007G055600 Sobic004G078600--Sobic007G055600 Sobic001G125700 Sobic001G125700 Sobic009G115400--Sobic001G125700 Sobic006G005500 Sobic006G005500 Sobic009G115400--Sobic006G005500 Sobic007G076000 Sobic007G076000 Sobic009G115400--Sobic007G076000 Sobic009G115400--Sobic007G055600 Sobic009G115400--Sobic005G182701 Sobic006G005400 Sobic006G005400 Sobic009G115400--Sobic006G005400 Sobic009G115400--Sobic001G201800 Sobic005G219000 Sobic005G219000 Sobic009G115400--Sobic005G219000 Sobic005G219100 Sobic005G219100 Sobic009G115400--Sobic005G219100 Sobic002G423600--Sobic001G056400 Sobic002G423600--Sobic005G182701 Sobic002G423600--Sobic001G201800 Sobic002G423600--Sobic001G012000 Sobic002G423600--Sobic004G078600 Sobic004G217700 Sobic004G217700 Sobic002G423600--Sobic004G217700 Sobic002G423600--Sobic007G055600 SobicK044407 SobicK044407 Sobic002G423600--SobicK044407 Sobic002G423600--Sobic006G045000 Sobic001G012000--SobicK044407 Sobic001G012000--Sobic001G056400 Sobic001G012000--Sobic006G045000 Sobic001G012000--Sobic005G182701 Sobic009G115300 Sobic009G115300 Sobic001G012000--Sobic009G115300 Sobic001G012000--Sobic002G423600 Sobic008G181801 Sobic008G181801 Sobic001G012000--Sobic008G181801 Sobic003G310200 Sobic003G310200 Sobic001G012000--Sobic003G310200 Sobic001G012000--Sobic009G115400 Sobic009G252100--Sobic001G201800 Sobic005G193600 Sobic005G193600 Sobic009G252100--Sobic005G193600 Sobic008G060300 Sobic008G060300 Sobic009G252100--Sobic008G060300 Sobic009G252100--Sobic002G041800 Sobic007G037800 Sobic007G037800 Sobic009G252100--Sobic007G037800 Sobic004G195800 Sobic004G195800 Sobic009G252100--Sobic004G195800 Sobic006G060800 Sobic006G060800 Sobic009G252100--Sobic006G060800 Sobic009G252100--Sobic004G078600 Sobic010G225500 Sobic010G225500 Sobic009G252100--Sobic010G225500 Sobic002G202700--Sobic002G108400 Sobic002G202700--Sobic009G115400 Sobic002G202700--Sobic001G201800 Sobic002G202700--Sobic009G115300 Sobic002G202700--Sobic010G225500 Sobic002G202700--Sobic001G012000 Sobic002G202700--Sobic006G005400 Sobic006G007650 Sobic006G007650 Sobic002G202700--Sobic006G007650 Sobic002G202700--Sobic006G005500 Sobic006G045000--SobicK044407 Sobic006G045000--Sobic001G012000 Sobic006G045000--Sobic001G056400 Sobic006G045000--Sobic008G181801 Sobic006G045000--Sobic002G423600 Sobic003G378301 Sobic003G378301 Sobic006G045000--Sobic003G378301 Sobic006G045000--Sobic005G182701 Sobic006G045000--Sobic001G201800 Sobic006G045000--Sobic004G217700 Sobic001G056400--Sobic005G182701 Sobic001G056400--Sobic001G012000 Sobic001G056400--Sobic007G055600 Sobic001G056400--SobicK044407 Sobic001G056400--Sobic003G378301 Sobic001G056400--Sobic007G076000 Sobic001G056400--Sobic002G423600 Sobic001G056500 Sobic001G056500 Sobic001G056400--Sobic001G056500 Sobic001G056400--Sobic006G045000 Sobic002G108400--Sobic002G202700 Sobic002G108400--Sobic009G115400 Sobic002G108400--Sobic006G005400 Sobic002G108400--Sobic001G201800 Sobic006G007100 Sobic006G007100 Sobic002G108400--Sobic006G007100 Sobic002G108400--Sobic010G225500 Sobic006G007600 Sobic006G007600 Sobic002G108400--Sobic006G007600 Sobic005G186500 Sobic005G186500 Sobic002G108400--Sobic005G186500 Sobic002G108400--Sobic006G005500
Octagon: transcription factors


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