Gene annotation
Transcriptome id Sobic.009G115400.1
Synonym Sb09g018280
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5YX51
Pfam PF15699
Panther DB PTHR33669 PTHR33669:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g30500.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
2 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
3 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
4 Sobic.007G055600 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K14174: beta-farnesene/exo-alpha-bergamotene synthase
5 Sobic.005G182701 - -
6 Sobic.006G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
7 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
8 Sobic.005G219000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@patatin, putative, expressed -
9 Sobic.005G219100 patatin, putative, expressed -
10 Sobic.009G115300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.006G007650 - -
12 Sobic.008G028600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY112, expressed -
13 Sobic.003G388400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
14 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
15 Sobic.006G007100 cysteine proteinase At4g11310 precursor, putative, expressed -
16 Sobic.006G007600 polyphenol oxidase, putative, expressed -
17 Sobic.001G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
18 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
19 Sobic.002G202700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed -
20 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase


Gene co-expression network
sample Sobic009G115400 Sobic009G115400 Sobic001G125700 Sobic001G125700 Sobic009G115400--Sobic001G125700 Sobic006G005500 Sobic006G005500 Sobic009G115400--Sobic006G005500 Sobic007G076000 Sobic007G076000 Sobic009G115400--Sobic007G076000 Sobic007G055600 Sobic007G055600 Sobic009G115400--Sobic007G055600 Sobic005G182701 Sobic005G182701 Sobic009G115400--Sobic005G182701 Sobic006G005400 Sobic006G005400 Sobic009G115400--Sobic006G005400 Sobic001G201800 Sobic001G201800 Sobic009G115400--Sobic001G201800 Sobic005G219000 Sobic005G219000 Sobic009G115400--Sobic005G219000 Sobic005G219100 Sobic005G219100 Sobic009G115400--Sobic005G219100 Sobic001G125700--Sobic006G005500 Sobic001G125700--Sobic005G219000 Sobic001G125700--Sobic005G219100 Sobic008G028600 Sobic008G028600 Sobic001G125700--Sobic008G028600 Sobic001G125700--Sobic007G076000 Sobic002G040400 Sobic002G040400 Sobic001G125700--Sobic002G040400 Sobic001G125700--Sobic006G005400 Sobic001G125700--Sobic007G055600 Sobic006G007100 Sobic006G007100 Sobic001G125700--Sobic006G007100 Sobic006G005500--Sobic001G125700 Sobic006G005500--Sobic005G219000 Sobic006G005500--Sobic008G028600 Sobic006G005500--Sobic005G219100 Sobic006G005500--Sobic007G076000 Sobic006G005500--Sobic002G040400 Sobic006G005500--Sobic007G055600 Sobic006G005500--Sobic006G005400 Sobic006G007650 Sobic006G007650 Sobic006G005500--Sobic006G007650 Sobic007G076000--Sobic007G055600 Sobic007G076000--Sobic005G182701 Sobic007G076000--Sobic006G005500 Sobic007G076000--Sobic001G125700 Sobic007G076000--Sobic002G040400 Sobic007G076000--Sobic008G028600 Sobic009G014600 Sobic009G014600 Sobic007G076000--Sobic009G014600 Sobic007G076000--Sobic005G219000 Sobic007G076000--Sobic006G007650 Sobic007G055600--Sobic005G182701 Sobic007G055600--Sobic007G076000 Sobic007G055600--Sobic006G005500 Sobic007G055600--Sobic001G125700 Sobic007G055600--Sobic009G014600 Sobic001G056400 Sobic001G056400 Sobic007G055600--Sobic001G056400 Sobic007G055600--Sobic002G040400 Sobic007G055600--Sobic008G028600 Sobic007G055600--Sobic009G115400 Sobic005G182701--Sobic007G055600 Sobic005G182701--Sobic007G076000 Sobic005G182701--Sobic001G056400 Sobic005G182701--Sobic006G005500 Sobic005G182701--Sobic001G125700 Sobic005G182701--Sobic009G014600 Sobic005G182701--Sobic009G115400 Sobic009G115300 Sobic009G115300 Sobic005G182701--Sobic009G115300 Sobic001G012000 Sobic001G012000 Sobic005G182701--Sobic001G012000 Sobic006G005400--Sobic006G007100 Sobic006G005400--Sobic005G219100 Sobic006G005400--Sobic001G125700 Sobic006G005400--Sobic005G219000 Sobic006G005400--Sobic006G005500 Sobic006G007600 Sobic006G007600 Sobic006G005400--Sobic006G007600 Sobic006G005400--Sobic009G115400 Sobic003G388400 Sobic003G388400 Sobic006G005400--Sobic003G388400 Sobic001G291500 Sobic001G291500 Sobic006G005400--Sobic001G291500 Sobic004G078600 Sobic004G078600 Sobic001G201800--Sobic004G078600 Sobic001G201800--Sobic009G115400 Sobic002G423600 Sobic002G423600 Sobic001G201800--Sobic002G423600 Sobic001G201800--Sobic001G012000 Sobic009G252100 Sobic009G252100 Sobic001G201800--Sobic009G252100 Sobic002G202700 Sobic002G202700 Sobic001G201800--Sobic002G202700 Sobic006G045000 Sobic006G045000 Sobic001G201800--Sobic006G045000 Sobic001G201800--Sobic001G056400 Sobic002G108400 Sobic002G108400 Sobic001G201800--Sobic002G108400 Sobic005G219000--Sobic005G219100 Sobic005G219000--Sobic001G125700 Sobic005G219000--Sobic006G005500 Sobic005G219000--Sobic008G028600 Sobic005G219000--Sobic002G040400 Sobic008G077800 Sobic008G077800 Sobic005G219000--Sobic008G077800 Sobic005G219000--Sobic006G007100 Sobic005G219000--Sobic006G005400 Sobic002G087500 Sobic002G087500 Sobic005G219000--Sobic002G087500 Sobic005G219100--Sobic005G219000 Sobic005G219100--Sobic001G125700 Sobic005G219100--Sobic006G007100 Sobic005G219100--Sobic006G005500 Sobic005G219100--Sobic006G005400 Sobic005G219100--Sobic008G028600 Sobic005G219100--Sobic008G077800 Sobic005G219100--Sobic002G040400 Sobic008G028566 Sobic008G028566 Sobic005G219100--Sobic008G028566
Octagon: transcription factors


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