Gene annotation
Transcriptome id Sobic.002G202700.1
Synonym Sb02g024760, WRKY18, ATWRKY18
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
WRKY76, expressed
UniProt C5XCU5
Pfam PF03106
Panther DB PTHR31429 PTHR31429:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G80840 : WRKY DNA-binding protein 40
RAP-DB (Rice) LOC_Os09g25060.1 : WRKY76, expressed
MaizeGDB (Corn) Zm00025a013905 , Zm00025a047002 , Zm00025a047001
Brachypodium KQJ90252
Barley HORVU5Hr1G065420.8 , HORVU5Hr1G065420.9 , HORVU5Hr1G065420.1 , HORVU5Hr1G065420.2 , HORVU5Hr1G065420.3 , HORVU5Hr1G065420.5 , HORVU5Hr1G065420.6 , HORVU5Hr1G065420.7 , HORVU6Hr1G028790.2 , HORVU6Hr1G028790.3 , HORVU6Hr1G028790.1 , HORVU5Hr1G065380.2 , HORVU5Hr1G065420.13 , HORVU5Hr1G065420.10 , HORVU5Hr1G065420.11 , HORVU5Hr1G065420.16 , HORVU5Hr1G065420.17 , HORVU5Hr1G065420.14 , HORVU5Hr1G065420.15 , HORVU5Hr1G065420.18 , HORVU5Hr1G065420.19 , HORVU5Hr1G065380.1
Wheat TraesCS6A02G146900 , TraesCS6B02G175100 , TraesCS6B02G175100 , TraesCS5D02G232900 , TraesCS5B02G224000 , TraesCS5D02G232900 , TraesCS5D02G232800 , TraesCS6D02G136200 , TraesCS6D02G136200 , TraesCS5B02G224100 , TraesCS7A02G508800 , TraesCS5A02G225600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G108400 cytochrome P450, putative, expressed -
2 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
4 Sobic.009G115300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.010G225500 - -
6 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
7 Sobic.006G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
8 Sobic.006G007650 - -
9 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
10 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -
11 Sobic.001G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
12 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
13 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
14 Sobic.009G252100 expressed protein -
15 Sobic.005G182701 - -
16 Sobic.007G055600 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K14174: beta-farnesene/exo-alpha-bergamotene synthase
17 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
18 Sobic.001G056500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
19 Sobic.006G007100 cysteine proteinase At4g11310 precursor, putative, expressed -
20 Sobic.006G123400 expressed protein -


Gene co-expression network
sample Sobic002G202700 Sobic002G202700 Sobic002G108400 Sobic002G108400 Sobic002G202700--Sobic002G108400 Sobic009G115400 Sobic009G115400 Sobic002G202700--Sobic009G115400 Sobic001G201800 Sobic001G201800 Sobic002G202700--Sobic001G201800 Sobic009G115300 Sobic009G115300 Sobic002G202700--Sobic009G115300 Sobic010G225500 Sobic010G225500 Sobic002G202700--Sobic010G225500 Sobic001G012000 Sobic001G012000 Sobic002G202700--Sobic001G012000 Sobic006G005400 Sobic006G005400 Sobic002G202700--Sobic006G005400 Sobic006G007650 Sobic006G007650 Sobic002G202700--Sobic006G007650 Sobic006G005500 Sobic006G005500 Sobic002G202700--Sobic006G005500 Sobic002G108400--Sobic002G202700 Sobic002G108400--Sobic009G115400 Sobic002G108400--Sobic006G005400 Sobic002G108400--Sobic001G201800 Sobic006G007100 Sobic006G007100 Sobic002G108400--Sobic006G007100 Sobic002G108400--Sobic010G225500 Sobic006G007600 Sobic006G007600 Sobic002G108400--Sobic006G007600 Sobic005G186500 Sobic005G186500 Sobic002G108400--Sobic005G186500 Sobic002G108400--Sobic006G005500 Sobic001G125700 Sobic001G125700 Sobic009G115400--Sobic001G125700 Sobic009G115400--Sobic006G005500 Sobic007G076000 Sobic007G076000 Sobic009G115400--Sobic007G076000 Sobic007G055600 Sobic007G055600 Sobic009G115400--Sobic007G055600 Sobic005G182701 Sobic005G182701 Sobic009G115400--Sobic005G182701 Sobic009G115400--Sobic006G005400 Sobic009G115400--Sobic001G201800 Sobic005G219000 Sobic005G219000 Sobic009G115400--Sobic005G219000 Sobic005G219100 Sobic005G219100 Sobic009G115400--Sobic005G219100 Sobic004G078600 Sobic004G078600 Sobic001G201800--Sobic004G078600 Sobic001G201800--Sobic009G115400 Sobic002G423600 Sobic002G423600 Sobic001G201800--Sobic002G423600 Sobic001G201800--Sobic001G012000 Sobic009G252100 Sobic009G252100 Sobic001G201800--Sobic009G252100 Sobic001G201800--Sobic002G202700 Sobic006G045000 Sobic006G045000 Sobic001G201800--Sobic006G045000 Sobic001G056400 Sobic001G056400 Sobic001G201800--Sobic001G056400 Sobic001G201800--Sobic002G108400 Sobic009G115300--Sobic005G182701 Sobic009G115300--Sobic007G055600 Sobic009G115300--Sobic007G076000 Sobic009G115300--Sobic001G012000 Sobic009G115300--Sobic009G115400 Sobic009G115300--Sobic006G007650 Sobic009G115300--Sobic001G056400 Sobic009G115300--Sobic006G005500 Sobic009G115300--Sobic001G125700 Sobic001G432500 Sobic001G432500 Sobic010G225500--Sobic001G432500 Sobic010G225500--Sobic002G202700 Sobic010G225500--Sobic009G115300 Sobic001G291500 Sobic001G291500 Sobic010G225500--Sobic001G291500 Sobic006G123400 Sobic006G123400 Sobic010G225500--Sobic006G123400 Sobic010G225500--Sobic009G115400 Sobic010G225500--Sobic006G005500 Sobic010G225500--Sobic002G108400 Sobic010G225500--Sobic001G125700 SobicK044407 SobicK044407 Sobic001G012000--SobicK044407 Sobic001G012000--Sobic001G056400 Sobic001G012000--Sobic006G045000 Sobic001G012000--Sobic005G182701 Sobic001G012000--Sobic009G115300 Sobic001G012000--Sobic002G423600 Sobic008G181801 Sobic008G181801 Sobic001G012000--Sobic008G181801 Sobic003G310200 Sobic003G310200 Sobic001G012000--Sobic003G310200 Sobic001G012000--Sobic009G115400 Sobic006G005400--Sobic006G007100 Sobic006G005400--Sobic005G219100 Sobic006G005400--Sobic001G125700 Sobic006G005400--Sobic005G219000 Sobic006G005400--Sobic006G005500 Sobic006G005400--Sobic006G007600 Sobic006G005400--Sobic009G115400 Sobic003G388400 Sobic003G388400 Sobic006G005400--Sobic003G388400 Sobic006G005400--Sobic001G291500 Sobic008G028600 Sobic008G028600 Sobic006G007650--Sobic008G028600 Sobic006G007650--Sobic006G005500 Sobic006G007650--Sobic007G076000 Sobic002G040400 Sobic002G040400 Sobic006G007650--Sobic002G040400 Sobic006G007650--Sobic001G125700 Sobic006G007650--Sobic005G219000 Sobic006G007650--Sobic007G055600 Sobic002G087500 Sobic002G087500 Sobic006G007650--Sobic002G087500 Sobic002G298400 Sobic002G298400 Sobic006G007650--Sobic002G298400 Sobic006G005500--Sobic001G125700 Sobic006G005500--Sobic005G219000 Sobic006G005500--Sobic008G028600 Sobic006G005500--Sobic005G219100 Sobic006G005500--Sobic007G076000 Sobic006G005500--Sobic002G040400 Sobic006G005500--Sobic007G055600 Sobic006G005500--Sobic006G005400 Sobic006G005500--Sobic006G007650
Octagon: transcription factors


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