Gene annotation
Transcriptome id Sobic.007G076000.2
Synonym ATCAD8, SbCAD5;SbCAD5;SbCAD5, Sb07g006090, ELI3, ELI3-2, CAD-B2
Functional annotation Cinnamyl alcohol dehydrogenase (PubMedID : 28606901)
Cinnamyl alcohol dehydrogenase (PubMedID : 19087955)
Cinnamyl alcohol dehydrogenase 9 CAD9 (At) (PubMedID : 27208977)
dehydrogenase, putative, expressed
UniProt A0A1Z5R8N9
Pfam PF00107 PF08240
Panther DB PTHR11695 PTHR11695:SF497
NCBI CDD KOG0023; Alcohol dehydrogenase, class V
KEGG Orthology K00083; cinnamyl-alcohol dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT4G39330 : cinnamyl alcohol dehydrogenase 9
RAP-DB (Rice) LOC_Os10g29470.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a046898 , Zm00025a012285 , Zm00025a046897 , Zm00025a054868 , Zm00025a046899 , Zm00025a009822
Brachypodium KQJ95583
Barley HORVU6Hr1G087220.4 , HORVU6Hr1G087220.5 , HORVU6Hr1G087220.1 , HORVU6Hr1G087220.3 , HORVU6Hr1G087220.2 , HORVU7Hr1G079380.2 , HORVU7Hr1G079380.3 , HORVU7Hr1G079380.1 , HORVU7Hr1G079380.6 , HORVU7Hr1G079380.7 , HORVU7Hr1G079380.4 , HORVU7Hr1G079380.5 , HORVU1Hr1G007800.2 , HORVU1Hr1G007800.3 , HORVU1Hr1G007800.1 , HORVU1Hr1G007800.6 , HORVU1Hr1G007800.7 , HORVU1Hr1G007800.4 , HORVU1Hr1G007800.5 , HORVU2Hr1G010830.1 , HORVU2Hr1G010830.2 , HORVU2Hr1G010830.3 , HORVU2Hr1G010830.4 , HORVU2Hr1G010830.6 , HORVU2Hr1G010830.7 , HORVU2Hr1G010840.1
Wheat TraesCS6A02G369800 , TraesCS6B02G406200 , TraesCS6D02G353700 , TraesCS7B02G232400 , TraesCS6B02G406300 , TraesCS6D02G353400 , TraesCS6D02G353400 , TraesCS6A02G370100 , TraesCS6B02G406000 , TraesCS7A02G380100 , TraesCS7A02G183000 , TraesCS7A02G350500 , TraesCS7D02G376600 , TraesCS7D02G184600 , TraesCS7B02G282100 , TraesCS7D02G184500 , TraesCS6D02G353300 , TraesCS6D02G353300 , TraesCS7D02G328300 , TraesCS7D02G328300
Populus -


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cDNA sequences
Sobic.007G076000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G055600 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K14174: beta-farnesene/exo-alpha-bergamotene synthase
2 Sobic.005G182701 - -
3 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
4 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
5 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.008G028600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY112, expressed -
7 Sobic.009G014600 Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed -
8 Sobic.005G219000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@patatin, putative, expressed -
9 Sobic.006G007650 - -
10 Sobic.002G087500 - -
11 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
13 Sobic.005G219100 patatin, putative, expressed -
14 Sobic.001G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
15 Sobic.002G391700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed K00430: peroxidase
16 Sobic.009G115300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.003G388400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.006G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
19 Sobic.001G432500 expressed protein -
20 Sobic.001G056500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase


Gene co-expression network
sample Sobic007G076000 Sobic007G076000 Sobic007G055600 Sobic007G055600 Sobic007G076000--Sobic007G055600 Sobic005G182701 Sobic005G182701 Sobic007G076000--Sobic005G182701 Sobic006G005500 Sobic006G005500 Sobic007G076000--Sobic006G005500 Sobic001G125700 Sobic001G125700 Sobic007G076000--Sobic001G125700 Sobic002G040400 Sobic002G040400 Sobic007G076000--Sobic002G040400 Sobic008G028600 Sobic008G028600 Sobic007G076000--Sobic008G028600 Sobic009G014600 Sobic009G014600 Sobic007G076000--Sobic009G014600 Sobic005G219000 Sobic005G219000 Sobic007G076000--Sobic005G219000 Sobic006G007650 Sobic006G007650 Sobic007G076000--Sobic006G007650 Sobic007G055600--Sobic005G182701 Sobic007G055600--Sobic007G076000 Sobic007G055600--Sobic006G005500 Sobic007G055600--Sobic001G125700 Sobic007G055600--Sobic009G014600 Sobic001G056400 Sobic001G056400 Sobic007G055600--Sobic001G056400 Sobic007G055600--Sobic002G040400 Sobic007G055600--Sobic008G028600 Sobic009G115400 Sobic009G115400 Sobic007G055600--Sobic009G115400 Sobic005G182701--Sobic007G055600 Sobic005G182701--Sobic007G076000 Sobic005G182701--Sobic001G056400 Sobic005G182701--Sobic006G005500 Sobic005G182701--Sobic001G125700 Sobic005G182701--Sobic009G014600 Sobic005G182701--Sobic009G115400 Sobic009G115300 Sobic009G115300 Sobic005G182701--Sobic009G115300 Sobic001G012000 Sobic001G012000 Sobic005G182701--Sobic001G012000 Sobic006G005500--Sobic001G125700 Sobic006G005500--Sobic005G219000 Sobic006G005500--Sobic008G028600 Sobic005G219100 Sobic005G219100 Sobic006G005500--Sobic005G219100 Sobic006G005500--Sobic007G076000 Sobic006G005500--Sobic002G040400 Sobic006G005500--Sobic007G055600 Sobic006G005400 Sobic006G005400 Sobic006G005500--Sobic006G005400 Sobic006G005500--Sobic006G007650 Sobic001G125700--Sobic006G005500 Sobic001G125700--Sobic005G219000 Sobic001G125700--Sobic005G219100 Sobic001G125700--Sobic008G028600 Sobic001G125700--Sobic007G076000 Sobic001G125700--Sobic002G040400 Sobic001G125700--Sobic006G005400 Sobic001G125700--Sobic007G055600 Sobic006G007100 Sobic006G007100 Sobic001G125700--Sobic006G007100 Sobic002G040400--Sobic008G028600 Sobic002G087500 Sobic002G087500 Sobic002G040400--Sobic002G087500 Sobic002G298400 Sobic002G298400 Sobic002G040400--Sobic002G298400 Sobic002G391700 Sobic002G391700 Sobic002G040400--Sobic002G391700 Sobic002G040400--Sobic006G005500 Sobic002G040400--Sobic005G219000 Sobic002G040400--Sobic001G125700 Sobic008G077800 Sobic008G077800 Sobic002G040400--Sobic008G077800 Sobic002G040400--Sobic007G076000 Sobic008G028600--Sobic002G040400 Sobic008G028600--Sobic005G219000 Sobic008G028600--Sobic002G087500 Sobic008G028600--Sobic006G005500 Sobic008G028600--Sobic001G125700 Sobic008G028600--Sobic002G391700 Sobic008G028600--Sobic002G298400 Sobic008G028600--Sobic008G077800 Sobic008G028600--Sobic005G219100 Sobic009G014600--Sobic007G076000 Sobic009G014600--Sobic007G055600 Sobic009G014600--Sobic002G040400 Sobic009G014600--Sobic006G005500 Sobic009G014600--Sobic008G028600 Sobic009G014600--Sobic001G125700 Sobic009G014600--Sobic002G087500 Sobic009G014600--Sobic005G182701 Sobic009G014600--Sobic005G219000 Sobic005G219000--Sobic005G219100 Sobic005G219000--Sobic001G125700 Sobic005G219000--Sobic006G005500 Sobic005G219000--Sobic008G028600 Sobic005G219000--Sobic002G040400 Sobic005G219000--Sobic008G077800 Sobic005G219000--Sobic006G007100 Sobic005G219000--Sobic006G005400 Sobic005G219000--Sobic002G087500 Sobic006G007650--Sobic008G028600 Sobic006G007650--Sobic006G005500 Sobic006G007650--Sobic007G076000 Sobic006G007650--Sobic002G040400 Sobic006G007650--Sobic001G125700 Sobic006G007650--Sobic005G219000 Sobic006G007650--Sobic007G055600 Sobic006G007650--Sobic002G087500 Sobic006G007650--Sobic002G298400
Octagon: transcription factors


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