Gene annotation
Transcriptome id Sobic.009G014600.1
Synonym Sb09g001420
Functional annotation Lipase class 3 family protein (At) (PubMedID : 27208977)
phospholipase, putative, expressed
UniProt C5YYK2
Pfam PF01764
Panther DB PTHR31828 PTHR31828:SF4
NCBI CDD KOG4569; Predicted lipase
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT4G18550 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os05g49840.1 : phospholipase, putative, expressed
MaizeGDB (Corn) Zm00025a002564 , Zm00025a038689 , Zm00025a044655 , Zm00025a040923
Brachypodium KQJ98375 , KQK04753
Barley HORVU1Hr1G090670.5 , HORVU1Hr1G090670.4 , HORVU1Hr1G090670.6 , HORVU1Hr1G090670.3 , HORVU1Hr1G090670.2
Wheat TraesCS1D02G420400 , TraesCS1A02G412500 , TraesCS1A02G412800 , TraesCS1B02G443300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
2 Sobic.007G055600 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K14174: beta-farnesene/exo-alpha-bergamotene synthase
3 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
5 Sobic.008G028600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY112, expressed -
6 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
7 Sobic.002G087500 - -
8 Sobic.005G182701 - -
9 Sobic.005G219000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@patatin, putative, expressed -
10 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
11 Sobic.002G391700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed K00430: peroxidase
12 Sobic.001G056500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
13 Sobic.006G007650 - -
14 Sobic.005G219100 patatin, putative, expressed -
15 Sobic.008G077800 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.004G143801 - -
17 Sobic.001G432500 expressed protein -
18 Sobic.002G093600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Jacalin-like lectin domain containing protein, putative, expressed -
19 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.003G388400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic009G014600 Sobic009G014600 Sobic007G076000 Sobic007G076000 Sobic009G014600--Sobic007G076000 Sobic007G055600 Sobic007G055600 Sobic009G014600--Sobic007G055600 Sobic002G040400 Sobic002G040400 Sobic009G014600--Sobic002G040400 Sobic006G005500 Sobic006G005500 Sobic009G014600--Sobic006G005500 Sobic008G028600 Sobic008G028600 Sobic009G014600--Sobic008G028600 Sobic001G125700 Sobic001G125700 Sobic009G014600--Sobic001G125700 Sobic002G087500 Sobic002G087500 Sobic009G014600--Sobic002G087500 Sobic005G182701 Sobic005G182701 Sobic009G014600--Sobic005G182701 Sobic005G219000 Sobic005G219000 Sobic009G014600--Sobic005G219000 Sobic007G076000--Sobic007G055600 Sobic007G076000--Sobic005G182701 Sobic007G076000--Sobic006G005500 Sobic007G076000--Sobic001G125700 Sobic007G076000--Sobic002G040400 Sobic007G076000--Sobic008G028600 Sobic007G076000--Sobic009G014600 Sobic007G076000--Sobic005G219000 Sobic006G007650 Sobic006G007650 Sobic007G076000--Sobic006G007650 Sobic007G055600--Sobic005G182701 Sobic007G055600--Sobic007G076000 Sobic007G055600--Sobic006G005500 Sobic007G055600--Sobic001G125700 Sobic007G055600--Sobic009G014600 Sobic001G056400 Sobic001G056400 Sobic007G055600--Sobic001G056400 Sobic007G055600--Sobic002G040400 Sobic007G055600--Sobic008G028600 Sobic009G115400 Sobic009G115400 Sobic007G055600--Sobic009G115400 Sobic002G040400--Sobic008G028600 Sobic002G040400--Sobic002G087500 Sobic002G298400 Sobic002G298400 Sobic002G040400--Sobic002G298400 Sobic002G391700 Sobic002G391700 Sobic002G040400--Sobic002G391700 Sobic002G040400--Sobic006G005500 Sobic002G040400--Sobic005G219000 Sobic002G040400--Sobic001G125700 Sobic008G077800 Sobic008G077800 Sobic002G040400--Sobic008G077800 Sobic002G040400--Sobic007G076000 Sobic006G005500--Sobic001G125700 Sobic006G005500--Sobic005G219000 Sobic006G005500--Sobic008G028600 Sobic005G219100 Sobic005G219100 Sobic006G005500--Sobic005G219100 Sobic006G005500--Sobic007G076000 Sobic006G005500--Sobic002G040400 Sobic006G005500--Sobic007G055600 Sobic006G005400 Sobic006G005400 Sobic006G005500--Sobic006G005400 Sobic006G005500--Sobic006G007650 Sobic008G028600--Sobic002G040400 Sobic008G028600--Sobic005G219000 Sobic008G028600--Sobic002G087500 Sobic008G028600--Sobic006G005500 Sobic008G028600--Sobic001G125700 Sobic008G028600--Sobic002G391700 Sobic008G028600--Sobic002G298400 Sobic008G028600--Sobic008G077800 Sobic008G028600--Sobic005G219100 Sobic001G125700--Sobic006G005500 Sobic001G125700--Sobic005G219000 Sobic001G125700--Sobic005G219100 Sobic001G125700--Sobic008G028600 Sobic001G125700--Sobic007G076000 Sobic001G125700--Sobic002G040400 Sobic001G125700--Sobic006G005400 Sobic001G125700--Sobic007G055600 Sobic006G007100 Sobic006G007100 Sobic001G125700--Sobic006G007100 Sobic002G087500--Sobic002G040400 Sobic002G087500--Sobic002G298400 Sobic002G087500--Sobic008G028600 Sobic002G087500--Sobic002G391700 Sobic002G093600 Sobic002G093600 Sobic002G087500--Sobic002G093600 Sobic002G087500--Sobic008G077800 Sobic002G087500--Sobic005G219000 Sobic002G087500--Sobic006G005500 Sobic002G087500--Sobic001G125700 Sobic005G182701--Sobic007G055600 Sobic005G182701--Sobic007G076000 Sobic005G182701--Sobic001G056400 Sobic005G182701--Sobic006G005500 Sobic005G182701--Sobic001G125700 Sobic005G182701--Sobic009G014600 Sobic005G182701--Sobic009G115400 Sobic009G115300 Sobic009G115300 Sobic005G182701--Sobic009G115300 Sobic001G012000 Sobic001G012000 Sobic005G182701--Sobic001G012000 Sobic005G219000--Sobic005G219100 Sobic005G219000--Sobic001G125700 Sobic005G219000--Sobic006G005500 Sobic005G219000--Sobic008G028600 Sobic005G219000--Sobic002G040400 Sobic005G219000--Sobic008G077800 Sobic005G219000--Sobic006G007100 Sobic005G219000--Sobic006G005400 Sobic005G219000--Sobic002G087500
Octagon: transcription factors


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