Gene annotation
Transcriptome id Sobic.005G219000.1
Synonym PLP4, Sb05g026990, AtPLAIVC, PLAV
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
patatin, putative, expressed
UniProt C5Y821
Pfam PF01734
Panther DB PTHR32176
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT4G37050 : PATATIN-like protein 4
RAP-DB (Rice) LOC_Os11g39990.1 : patatin, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G219100 patatin, putative, expressed -
2 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
3 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
4 Sobic.008G028600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY112, expressed -
5 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.008G077800 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.006G007100 cysteine proteinase At4g11310 precursor, putative, expressed -
8 Sobic.006G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
9 Sobic.002G087500 - -
10 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
11 Sobic.002G391700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed K00430: peroxidase
12 Sobic.008G028566 - -
13 Sobic.006G007300 - -
14 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
15 Sobic.006G007650 - -
16 Sobic.007G055600 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K14174: beta-farnesene/exo-alpha-bergamotene synthase
17 Sobic.009G014600 Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed -
18 Sobic.001G291500 - -
19 Sobic.002G093600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Jacalin-like lectin domain containing protein, putative, expressed -
20 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic005G219000 Sobic005G219000 Sobic005G219100 Sobic005G219100 Sobic005G219000--Sobic005G219100 Sobic001G125700 Sobic001G125700 Sobic005G219000--Sobic001G125700 Sobic006G005500 Sobic006G005500 Sobic005G219000--Sobic006G005500 Sobic008G028600 Sobic008G028600 Sobic005G219000--Sobic008G028600 Sobic002G040400 Sobic002G040400 Sobic005G219000--Sobic002G040400 Sobic008G077800 Sobic008G077800 Sobic005G219000--Sobic008G077800 Sobic006G007100 Sobic006G007100 Sobic005G219000--Sobic006G007100 Sobic006G005400 Sobic006G005400 Sobic005G219000--Sobic006G005400 Sobic002G087500 Sobic002G087500 Sobic005G219000--Sobic002G087500 Sobic005G219100--Sobic005G219000 Sobic005G219100--Sobic001G125700 Sobic005G219100--Sobic006G007100 Sobic005G219100--Sobic006G005500 Sobic005G219100--Sobic006G005400 Sobic005G219100--Sobic008G028600 Sobic005G219100--Sobic008G077800 Sobic005G219100--Sobic002G040400 Sobic008G028566 Sobic008G028566 Sobic005G219100--Sobic008G028566 Sobic001G125700--Sobic006G005500 Sobic001G125700--Sobic005G219000 Sobic001G125700--Sobic005G219100 Sobic001G125700--Sobic008G028600 Sobic007G076000 Sobic007G076000 Sobic001G125700--Sobic007G076000 Sobic001G125700--Sobic002G040400 Sobic001G125700--Sobic006G005400 Sobic007G055600 Sobic007G055600 Sobic001G125700--Sobic007G055600 Sobic001G125700--Sobic006G007100 Sobic006G005500--Sobic001G125700 Sobic006G005500--Sobic005G219000 Sobic006G005500--Sobic008G028600 Sobic006G005500--Sobic005G219100 Sobic006G005500--Sobic007G076000 Sobic006G005500--Sobic002G040400 Sobic006G005500--Sobic007G055600 Sobic006G005500--Sobic006G005400 Sobic006G007650 Sobic006G007650 Sobic006G005500--Sobic006G007650 Sobic008G028600--Sobic002G040400 Sobic008G028600--Sobic005G219000 Sobic008G028600--Sobic002G087500 Sobic008G028600--Sobic006G005500 Sobic008G028600--Sobic001G125700 Sobic002G391700 Sobic002G391700 Sobic008G028600--Sobic002G391700 Sobic002G298400 Sobic002G298400 Sobic008G028600--Sobic002G298400 Sobic008G028600--Sobic008G077800 Sobic008G028600--Sobic005G219100 Sobic002G040400--Sobic008G028600 Sobic002G040400--Sobic002G087500 Sobic002G040400--Sobic002G298400 Sobic002G040400--Sobic002G391700 Sobic002G040400--Sobic006G005500 Sobic002G040400--Sobic005G219000 Sobic002G040400--Sobic001G125700 Sobic002G040400--Sobic008G077800 Sobic002G040400--Sobic007G076000 Sobic006G007300 Sobic006G007300 Sobic008G077800--Sobic006G007300 Sobic008G077800--Sobic002G391700 Sobic008G077800--Sobic008G028566 Sobic002G093600 Sobic002G093600 Sobic008G077800--Sobic002G093600 Sobic008G077800--Sobic008G028600 Sobic008G077800--Sobic002G087500 Sobic008G077800--Sobic005G219000 Sobic008G077800--Sobic002G040400 Sobic008G077800--Sobic002G298400 Sobic006G007100--Sobic006G005400 Sobic006G007100--Sobic005G219100 Sobic006G007600 Sobic006G007600 Sobic006G007100--Sobic006G007600 Sobic006G007100--Sobic005G219000 Sobic006G007100--Sobic001G125700 Sobic006G007100--Sobic006G005500 Sobic001G291500 Sobic001G291500 Sobic006G007100--Sobic001G291500 Sobic006G007100--Sobic008G028600 Sobic006G007100--Sobic008G077800 Sobic006G005400--Sobic006G007100 Sobic006G005400--Sobic005G219100 Sobic006G005400--Sobic001G125700 Sobic006G005400--Sobic005G219000 Sobic006G005400--Sobic006G005500 Sobic006G005400--Sobic006G007600 Sobic009G115400 Sobic009G115400 Sobic006G005400--Sobic009G115400 Sobic003G388400 Sobic003G388400 Sobic006G005400--Sobic003G388400 Sobic006G005400--Sobic001G291500 Sobic002G087500--Sobic002G040400 Sobic002G087500--Sobic002G298400 Sobic002G087500--Sobic008G028600 Sobic002G087500--Sobic002G391700 Sobic002G087500--Sobic002G093600 Sobic002G087500--Sobic008G077800 Sobic002G087500--Sobic005G219000 Sobic002G087500--Sobic006G005500 Sobic002G087500--Sobic001G125700
Octagon: transcription factors


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