Gene annotation
Transcriptome id Sobic.001G291500.1
Synonym
Functional annotation -
UniProt A0A1B6QLS9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.001G291500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G007100 cysteine proteinase At4g11310 precursor, putative, expressed -
2 Sobic.005G219100 patatin, putative, expressed -
3 Sobic.005G219000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@patatin, putative, expressed -
4 Sobic.006G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
5 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
6 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
7 Sobic.006G007300 - -
8 Sobic.001G432500 expressed protein -
9 Sobic.008G077800 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.006G007600 polyphenol oxidase, putative, expressed -
11 Sobic.008G028566 - -
12 Sobic.008G028600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY112, expressed -
13 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
14 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G388400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.008G145200 aspartic proteinase nepenthesin precursor, putative, expressed -
17 Sobic.002G391700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed K00430: peroxidase
18 Sobic.004G019100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K15086: (3S)-linalool synthase
19 Sobic.002G087500 - -
20 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase


Gene co-expression network
sample Sobic001G291500 Sobic001G291500 Sobic006G007100 Sobic006G007100 Sobic001G291500--Sobic006G007100 Sobic005G219100 Sobic005G219100 Sobic001G291500--Sobic005G219100 Sobic005G219000 Sobic005G219000 Sobic001G291500--Sobic005G219000 Sobic006G005400 Sobic006G005400 Sobic001G291500--Sobic006G005400 Sobic001G125700 Sobic001G125700 Sobic001G291500--Sobic001G125700 Sobic006G005500 Sobic006G005500 Sobic001G291500--Sobic006G005500 Sobic006G007300 Sobic006G007300 Sobic001G291500--Sobic006G007300 Sobic001G432500 Sobic001G432500 Sobic001G291500--Sobic001G432500 Sobic008G077800 Sobic008G077800 Sobic001G291500--Sobic008G077800 Sobic006G007100--Sobic006G005400 Sobic006G007100--Sobic005G219100 Sobic006G007600 Sobic006G007600 Sobic006G007100--Sobic006G007600 Sobic006G007100--Sobic005G219000 Sobic006G007100--Sobic001G125700 Sobic006G007100--Sobic006G005500 Sobic006G007100--Sobic001G291500 Sobic008G028600 Sobic008G028600 Sobic006G007100--Sobic008G028600 Sobic006G007100--Sobic008G077800 Sobic005G219100--Sobic005G219000 Sobic005G219100--Sobic001G125700 Sobic005G219100--Sobic006G007100 Sobic005G219100--Sobic006G005500 Sobic005G219100--Sobic006G005400 Sobic005G219100--Sobic008G028600 Sobic005G219100--Sobic008G077800 Sobic002G040400 Sobic002G040400 Sobic005G219100--Sobic002G040400 Sobic008G028566 Sobic008G028566 Sobic005G219100--Sobic008G028566 Sobic005G219000--Sobic005G219100 Sobic005G219000--Sobic001G125700 Sobic005G219000--Sobic006G005500 Sobic005G219000--Sobic008G028600 Sobic005G219000--Sobic002G040400 Sobic005G219000--Sobic008G077800 Sobic005G219000--Sobic006G007100 Sobic005G219000--Sobic006G005400 Sobic002G087500 Sobic002G087500 Sobic005G219000--Sobic002G087500 Sobic006G005400--Sobic006G007100 Sobic006G005400--Sobic005G219100 Sobic006G005400--Sobic001G125700 Sobic006G005400--Sobic005G219000 Sobic006G005400--Sobic006G005500 Sobic006G005400--Sobic006G007600 Sobic009G115400 Sobic009G115400 Sobic006G005400--Sobic009G115400 Sobic003G388400 Sobic003G388400 Sobic006G005400--Sobic003G388400 Sobic006G005400--Sobic001G291500 Sobic001G125700--Sobic006G005500 Sobic001G125700--Sobic005G219000 Sobic001G125700--Sobic005G219100 Sobic001G125700--Sobic008G028600 Sobic007G076000 Sobic007G076000 Sobic001G125700--Sobic007G076000 Sobic001G125700--Sobic002G040400 Sobic001G125700--Sobic006G005400 Sobic007G055600 Sobic007G055600 Sobic001G125700--Sobic007G055600 Sobic001G125700--Sobic006G007100 Sobic006G005500--Sobic001G125700 Sobic006G005500--Sobic005G219000 Sobic006G005500--Sobic008G028600 Sobic006G005500--Sobic005G219100 Sobic006G005500--Sobic007G076000 Sobic006G005500--Sobic002G040400 Sobic006G005500--Sobic007G055600 Sobic006G005500--Sobic006G005400 Sobic006G007650 Sobic006G007650 Sobic006G005500--Sobic006G007650 Sobic006G007300--Sobic008G077800 Sobic006G007300--Sobic008G028566 Sobic002G093600 Sobic002G093600 Sobic006G007300--Sobic002G093600 Sobic002G391700 Sobic002G391700 Sobic006G007300--Sobic002G391700 Sobic008G145200 Sobic008G145200 Sobic006G007300--Sobic008G145200 Sobic006G007300--Sobic008G028600 Sobic006G007300--Sobic005G219000 Sobic006G007300--Sobic002G087500 Sobic002G298400 Sobic002G298400 Sobic006G007300--Sobic002G298400 Sobic001G432500--Sobic008G028600 Sobic001G432500--Sobic002G040400 Sobic001G432500--Sobic002G298400 Sobic001G432500--Sobic002G087500 Sobic001G432500--Sobic005G219000 Sobic001G432500--Sobic006G005500 Sobic001G432500--Sobic002G391700 Sobic001G432500--Sobic001G125700 Sobic001G432500--Sobic007G076000 Sobic008G077800--Sobic006G007300 Sobic008G077800--Sobic002G391700 Sobic008G077800--Sobic008G028566 Sobic008G077800--Sobic002G093600 Sobic008G077800--Sobic008G028600 Sobic008G077800--Sobic002G087500 Sobic008G077800--Sobic005G219000 Sobic008G077800--Sobic002G040400 Sobic008G077800--Sobic002G298400
Octagon: transcription factors


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