Gene annotation
Transcriptome id Sobic.008G145200.1
Synonym Sb08g019550
Functional annotation aspartic proteinase nepenthesin precursor, putative, expressed
UniProt C5YQT0
Pfam PF00026
Panther DB PTHR13683:SF346 PTHR13683
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0004190; aspartic-type endopeptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT2G03200 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os12g39360.1 : aspartic proteinase nepenthesin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a056159
Brachypodium KQK02216 , KQJ86115 , KQJ82865
Barley HORVU2Hr1G078790.3 , HORVU2Hr1G078790.2 , HORVU2Hr1G078790.1 , HORVU4Hr1G088160.1 , HORVU0Hr1G029570.1 , HORVU4Hr1G088110.1 , HORVU7Hr1G007790.1 , HORVU2Hr1G078730.5 , HORVU2Hr1G078730.4 , HORVU2Hr1G078730.1 , HORVU2Hr1G078730.3 , HORVU7Hr1G007690.1
Wheat TraesCS5D02G034000 , TraesCS5A02G026200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G007300 - -
2 Sobic.008G028566 - -
3 Sobic.008G077800 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.002G093600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Jacalin-like lectin domain containing protein, putative, expressed -
5 Sobic.002G391700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed K00430: peroxidase
6 Sobic.001G261750 - -
7 Sobic.001G261750 - -
8 Sobic.001G261750 - -
9 Sobic.001G261750 - -
10 Sobic.001G261750 - -
11 Sobic.002G224300 no apical meristem protein, putative, expressed -
12 Sobic.005G219000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@patatin, putative, expressed -
13 Sobic.005G219100 patatin, putative, expressed -
14 Sobic.008G028600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY112, expressed -
15 Sobic.001G291500 - -
16 Sobic.002G087500 - -
17 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
19 Sobic.008G028533 - -
20 Sobic.006G007100 cysteine proteinase At4g11310 precursor, putative, expressed -


Gene co-expression network
sample Sobic008G145200 Sobic008G145200 Sobic006G007300 Sobic006G007300 Sobic008G145200--Sobic006G007300 Sobic008G028566 Sobic008G028566 Sobic008G145200--Sobic008G028566 Sobic008G077800 Sobic008G077800 Sobic008G145200--Sobic008G077800 Sobic002G093600 Sobic002G093600 Sobic008G145200--Sobic002G093600 Sobic002G391700 Sobic002G391700 Sobic008G145200--Sobic002G391700 Sobic001G261750 Sobic001G261750 Sobic008G145200--Sobic001G261750 Sobic006G007300--Sobic008G077800 Sobic006G007300--Sobic008G028566 Sobic006G007300--Sobic002G093600 Sobic006G007300--Sobic002G391700 Sobic006G007300--Sobic008G145200 Sobic008G028600 Sobic008G028600 Sobic006G007300--Sobic008G028600 Sobic005G219000 Sobic005G219000 Sobic006G007300--Sobic005G219000 Sobic002G087500 Sobic002G087500 Sobic006G007300--Sobic002G087500 Sobic002G298400 Sobic002G298400 Sobic006G007300--Sobic002G298400 Sobic008G028566--Sobic006G007300 Sobic008G028566--Sobic008G077800 Sobic008G028566--Sobic002G093600 Sobic008G028566--Sobic002G391700 Sobic008G028566--Sobic008G028600 Sobic008G028566--Sobic005G219000 Sobic008G028566--Sobic002G298400 Sobic008G028566--Sobic002G087500 Sobic002G040400 Sobic002G040400 Sobic008G028566--Sobic002G040400 Sobic008G077800--Sobic006G007300 Sobic008G077800--Sobic002G391700 Sobic008G077800--Sobic008G028566 Sobic008G077800--Sobic002G093600 Sobic008G077800--Sobic008G028600 Sobic008G077800--Sobic002G087500 Sobic008G077800--Sobic005G219000 Sobic008G077800--Sobic002G040400 Sobic008G077800--Sobic002G298400 Sobic002G093600--Sobic002G391700 Sobic002G093600--Sobic008G077800 Sobic002G093600--Sobic002G298400 Sobic002G093600--Sobic002G087500 Sobic002G093600--Sobic006G007300 Sobic002G093600--Sobic008G028566 Sobic002G093600--Sobic002G040400 Sobic002G093600--Sobic008G028600 Sobic004G143801 Sobic004G143801 Sobic002G093600--Sobic004G143801 Sobic002G391700--Sobic002G093600 Sobic002G391700--Sobic002G087500 Sobic002G391700--Sobic002G298400 Sobic002G391700--Sobic002G040400 Sobic002G391700--Sobic008G077800 Sobic002G391700--Sobic008G028600 Sobic002G391700--Sobic006G007300 Sobic002G391700--Sobic008G028566 Sobic002G391700--Sobic005G219000 Sobic001G261750--Sobic001G261750 Sobic001G494600 Sobic001G494600 Sobic001G261750--Sobic001G494600 Sobic001G261750--Sobic002G093600 Sobic008G028533 Sobic008G028533 Sobic001G261750--Sobic008G028533 Sobic001G261750--Sobic008G145200 Sobic001G261750--Sobic006G007300
Octagon: transcription factors


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