Gene annotation
Transcriptome id Sobic.002G108400.1
Synonym Sb02g009220, CYP76C3
Functional annotation cytochrome P450, putative, expressed
UniProt C5X3M5
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF121
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G45550 : cytochrome P450, family 76, subfamily C, polypeptide 4
RAP-DB (Rice) LOC_Os12g09500.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS3B02G402500 , TraesCS3D02G363400 , TraesCS7D02G038600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G202700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed -
2 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.006G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
4 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
5 Sobic.006G007100 cysteine proteinase At4g11310 precursor, putative, expressed -
6 Sobic.010G225500 - -
7 Sobic.006G007600 polyphenol oxidase, putative, expressed -
8 Sobic.005G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K08249: hydroxymandelonitrile lyase
9 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
10 Sobic.009G115300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
12 Sobic.005G219100 patatin, putative, expressed -
13 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
14 Sobic.001G291500 - -
15 Sobic.005G219000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@patatin, putative, expressed -
16 Sobic.006G007650 - -
17 Sobic.009G252100 expressed protein -
18 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -
19 Sobic.003G388400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
20 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase


Gene co-expression network
sample Sobic002G108400 Sobic002G108400 Sobic002G202700 Sobic002G202700 Sobic002G108400--Sobic002G202700 Sobic009G115400 Sobic009G115400 Sobic002G108400--Sobic009G115400 Sobic006G005400 Sobic006G005400 Sobic002G108400--Sobic006G005400 Sobic001G201800 Sobic001G201800 Sobic002G108400--Sobic001G201800 Sobic006G007100 Sobic006G007100 Sobic002G108400--Sobic006G007100 Sobic010G225500 Sobic010G225500 Sobic002G108400--Sobic010G225500 Sobic006G007600 Sobic006G007600 Sobic002G108400--Sobic006G007600 Sobic005G186500 Sobic005G186500 Sobic002G108400--Sobic005G186500 Sobic006G005500 Sobic006G005500 Sobic002G108400--Sobic006G005500 Sobic002G202700--Sobic002G108400 Sobic002G202700--Sobic009G115400 Sobic002G202700--Sobic001G201800 Sobic009G115300 Sobic009G115300 Sobic002G202700--Sobic009G115300 Sobic002G202700--Sobic010G225500 Sobic001G012000 Sobic001G012000 Sobic002G202700--Sobic001G012000 Sobic002G202700--Sobic006G005400 Sobic006G007650 Sobic006G007650 Sobic002G202700--Sobic006G007650 Sobic002G202700--Sobic006G005500 Sobic001G125700 Sobic001G125700 Sobic009G115400--Sobic001G125700 Sobic009G115400--Sobic006G005500 Sobic007G076000 Sobic007G076000 Sobic009G115400--Sobic007G076000 Sobic007G055600 Sobic007G055600 Sobic009G115400--Sobic007G055600 Sobic005G182701 Sobic005G182701 Sobic009G115400--Sobic005G182701 Sobic009G115400--Sobic006G005400 Sobic009G115400--Sobic001G201800 Sobic005G219000 Sobic005G219000 Sobic009G115400--Sobic005G219000 Sobic005G219100 Sobic005G219100 Sobic009G115400--Sobic005G219100 Sobic006G005400--Sobic006G007100 Sobic006G005400--Sobic005G219100 Sobic006G005400--Sobic001G125700 Sobic006G005400--Sobic005G219000 Sobic006G005400--Sobic006G005500 Sobic006G005400--Sobic006G007600 Sobic006G005400--Sobic009G115400 Sobic003G388400 Sobic003G388400 Sobic006G005400--Sobic003G388400 Sobic001G291500 Sobic001G291500 Sobic006G005400--Sobic001G291500 Sobic004G078600 Sobic004G078600 Sobic001G201800--Sobic004G078600 Sobic001G201800--Sobic009G115400 Sobic002G423600 Sobic002G423600 Sobic001G201800--Sobic002G423600 Sobic001G201800--Sobic001G012000 Sobic009G252100 Sobic009G252100 Sobic001G201800--Sobic009G252100 Sobic001G201800--Sobic002G202700 Sobic006G045000 Sobic006G045000 Sobic001G201800--Sobic006G045000 Sobic001G056400 Sobic001G056400 Sobic001G201800--Sobic001G056400 Sobic001G201800--Sobic002G108400 Sobic006G007100--Sobic006G005400 Sobic006G007100--Sobic005G219100 Sobic006G007100--Sobic006G007600 Sobic006G007100--Sobic005G219000 Sobic006G007100--Sobic001G125700 Sobic006G007100--Sobic006G005500 Sobic006G007100--Sobic001G291500 Sobic008G028600 Sobic008G028600 Sobic006G007100--Sobic008G028600 Sobic008G077800 Sobic008G077800 Sobic006G007100--Sobic008G077800 Sobic001G432500 Sobic001G432500 Sobic010G225500--Sobic001G432500 Sobic010G225500--Sobic002G202700 Sobic010G225500--Sobic009G115300 Sobic010G225500--Sobic001G291500 Sobic006G123400 Sobic006G123400 Sobic010G225500--Sobic006G123400 Sobic010G225500--Sobic009G115400 Sobic010G225500--Sobic006G005500 Sobic010G225500--Sobic002G108400 Sobic010G225500--Sobic001G125700 Sobic006G007600--Sobic006G007100 Sobic006G007600--Sobic006G005400 Sobic006G007600--Sobic005G219100 Sobic006G007600--Sobic001G125700 Sobic006G007600--Sobic005G219000 Sobic006G007600--Sobic006G005500 Sobic006G007600--Sobic009G115400 Sobic006G007600--Sobic001G291500 Sobic006G007600--Sobic005G186500 Sobic005G186500--Sobic006G005400 Sobic005G186500--Sobic006G007100 Sobic005G186500--Sobic006G007600 Sobic010G171900 Sobic010G171900 Sobic005G186500--Sobic010G171900 Sobic006G027500 Sobic006G027500 Sobic005G186500--Sobic006G027500 Sobic004G019100 Sobic004G019100 Sobic005G186500--Sobic004G019100 Sobic004G018900 Sobic004G018900 Sobic005G186500--Sobic004G018900 Sobic005G186500--Sobic005G219100 Sobic004G019400 Sobic004G019400 Sobic005G186500--Sobic004G019400 Sobic006G005500--Sobic001G125700 Sobic006G005500--Sobic005G219000 Sobic006G005500--Sobic008G028600 Sobic006G005500--Sobic005G219100 Sobic006G005500--Sobic007G076000 Sobic002G040400 Sobic002G040400 Sobic006G005500--Sobic002G040400 Sobic006G005500--Sobic007G055600 Sobic006G005500--Sobic006G005400 Sobic006G005500--Sobic006G007650
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.