Gene annotation
Transcriptome id Sobic.005G186500.1
Synonym Sb05g024440, SCPL27
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed
UniProt Q9XE80 , C5Y6E0
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF71
NCBI CDD -
KEGG Orthology K08249; hydroxymandelonitrile lyase
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT3G07990 : serine carboxypeptidase-like 27
RAP-DB (Rice) LOC_Os01g06490.1 : OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a029806 , Zm00025a015672
Brachypodium -
Barley -
Wheat TraesCS6B02G388600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
2 Sobic.006G007100 cysteine proteinase At4g11310 precursor, putative, expressed -
3 Sobic.006G007600 polyphenol oxidase, putative, expressed -
4 Sobic.010G171900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase (Os)(PubMedID : 27208977)@L-ascorbate oxidase precursor, putative, expressed -
5 Sobic.006G027500 terpene synthase, putative, expressed -
6 Sobic.004G019100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K15086: (3S)-linalool synthase
7 Sobic.004G018900 terpene synthase, putative, expressed K15086: (3S)-linalool synthase
8 Sobic.005G219100 patatin, putative, expressed -
9 Sobic.004G019400 Protein terpene synthase 14 (At)(PubMedID : 27208977)@"Protein terpene synthase 14, S-linalool synthase (Os)"(PubMedID : 27208977)@terpene synthase, putative, expressed -
10 Sobic.002G108400 cytochrome P450, putative, expressed -
11 Sobic.001G291500 - -
12 Sobic.003G388400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
13 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
15 Sobic.005G219000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@patatin, putative, expressed -
16 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
17 Sobic.009G252100 expressed protein -
18 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
19 Sobic.005G193600 3 Ketoacyl CoA synthetase 2 KCS2 (fatty acid elongase) (At)(PubMedID : 27208977)@3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
20 Sobic.002G202700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed -


Gene co-expression network
sample Sobic005G186500 Sobic005G186500 Sobic006G005400 Sobic006G005400 Sobic005G186500--Sobic006G005400 Sobic006G007100 Sobic006G007100 Sobic005G186500--Sobic006G007100 Sobic006G007600 Sobic006G007600 Sobic005G186500--Sobic006G007600 Sobic010G171900 Sobic010G171900 Sobic005G186500--Sobic010G171900 Sobic006G027500 Sobic006G027500 Sobic005G186500--Sobic006G027500 Sobic004G019100 Sobic004G019100 Sobic005G186500--Sobic004G019100 Sobic004G018900 Sobic004G018900 Sobic005G186500--Sobic004G018900 Sobic005G219100 Sobic005G219100 Sobic005G186500--Sobic005G219100 Sobic004G019400 Sobic004G019400 Sobic005G186500--Sobic004G019400 Sobic006G005400--Sobic006G007100 Sobic006G005400--Sobic005G219100 Sobic001G125700 Sobic001G125700 Sobic006G005400--Sobic001G125700 Sobic005G219000 Sobic005G219000 Sobic006G005400--Sobic005G219000 Sobic006G005500 Sobic006G005500 Sobic006G005400--Sobic006G005500 Sobic006G005400--Sobic006G007600 Sobic009G115400 Sobic009G115400 Sobic006G005400--Sobic009G115400 Sobic003G388400 Sobic003G388400 Sobic006G005400--Sobic003G388400 Sobic001G291500 Sobic001G291500 Sobic006G005400--Sobic001G291500 Sobic006G007100--Sobic006G005400 Sobic006G007100--Sobic005G219100 Sobic006G007100--Sobic006G007600 Sobic006G007100--Sobic005G219000 Sobic006G007100--Sobic001G125700 Sobic006G007100--Sobic006G005500 Sobic006G007100--Sobic001G291500 Sobic008G028600 Sobic008G028600 Sobic006G007100--Sobic008G028600 Sobic008G077800 Sobic008G077800 Sobic006G007100--Sobic008G077800 Sobic006G007600--Sobic006G007100 Sobic006G007600--Sobic006G005400 Sobic006G007600--Sobic005G219100 Sobic006G007600--Sobic001G125700 Sobic006G007600--Sobic005G219000 Sobic006G007600--Sobic006G005500 Sobic006G007600--Sobic009G115400 Sobic006G007600--Sobic001G291500 Sobic006G007600--Sobic005G186500 Sobic010G171900--Sobic004G018900 Sobic010G171900--Sobic006G027500 Sobic010G171900--Sobic005G186500 Sobic008G080600 Sobic008G080600 Sobic010G171900--Sobic008G080600 Sobic010G171900--Sobic006G007100 Sobic010G171900--Sobic004G019100 Sobic010G171900--Sobic006G007600 Sobic010G171900--Sobic006G005400 Sobic010G171900--Sobic001G291500 Sobic006G027500--Sobic010G171900 Sobic006G027500--Sobic004G018900 Sobic006G027500--Sobic005G186500 Sobic006G027500--Sobic008G080600 Sobic006G027500--Sobic006G007100 Sobic006G027500--Sobic004G019100 Sobic006G027500--Sobic006G005400 Sobic006G027500--Sobic001G291500 Sobic006G027500--Sobic006G007600 Sobic004G019100--Sobic006G007100 Sobic004G019100--Sobic006G005400 Sobic004G019100--Sobic001G291500 Sobic004G019100--Sobic005G219100 Sobic004G019100--Sobic005G186500 Sobic004G019100--Sobic006G027500 Sobic004G019100--Sobic006G007600 Sobic004G019100--Sobic005G219000 Sobic004G019100--Sobic003G388400 Sobic004G018900--Sobic010G171900 Sobic004G018900--Sobic006G027500 Sobic004G018900--Sobic005G186500 Sobic004G018900--Sobic008G080600 Sobic004G245300 Sobic004G245300 Sobic004G018900--Sobic004G245300 Sobic008G060200 Sobic008G060200 Sobic004G018900--Sobic008G060200 Sobic005G065500 Sobic005G065500 Sobic004G018900--Sobic005G065500 Sobic006G180800 Sobic006G180800 Sobic004G018900--Sobic006G180800 Sobic004G018900--Sobic004G019100 Sobic005G219100--Sobic005G219000 Sobic005G219100--Sobic001G125700 Sobic005G219100--Sobic006G007100 Sobic005G219100--Sobic006G005500 Sobic005G219100--Sobic006G005400 Sobic005G219100--Sobic008G028600 Sobic005G219100--Sobic008G077800 Sobic002G040400 Sobic002G040400 Sobic005G219100--Sobic002G040400 Sobic008G028566 Sobic008G028566 Sobic005G219100--Sobic008G028566 Sobic004G019400--Sobic005G186500 Sobic007G037800 Sobic007G037800 Sobic004G019400--Sobic007G037800 Sobic001G201800 Sobic001G201800 Sobic004G019400--Sobic001G201800 Sobic003G096500 Sobic003G096500 Sobic004G019400--Sobic003G096500 Sobic004G019400--Sobic008G060200 Sobic009G202400 Sobic009G202400 Sobic004G019400--Sobic009G202400 Sobic008G060300 Sobic008G060300 Sobic004G019400--Sobic008G060300 Sobic005G193500 Sobic005G193500 Sobic004G019400--Sobic005G193500 Sobic002G108400 Sobic002G108400 Sobic004G019400--Sobic002G108400
Octagon: transcription factors


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