Gene annotation
Transcriptome id Sobic.010G171900.1,Sobic.010G171900.2
Synonym Sb10g022440,
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
L-ascorbate oxidase (Os) (PubMedID : 27208977)
L-ascorbate oxidase precursor, putative, expressed
UniProt C5Z514 , A0A194YJR2
Pfam PF07732 PF07731 PF00394 PF07732 PF07731
Panther DB PTHR11709 PTHR11709:SF110
NCBI CDD KOG1263; Multicopper oxidases
KEGG Orthology -
Gene Ontology GO:0005507; copper ion binding GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G21100 : Plant L-ascorbate oxidase
RAP-DB (Rice) LOC_Os06g37150.1 : L-ascorbate oxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a046704 , Zm00025a046705 , Zm00025a051107
Brachypodium KQJ90932 , KQK17923 , KQK17921
Barley HORVU7Hr1G087240.2 , HORVU7Hr1G087240.3 , HORVU7Hr1G087250.8 , HORVU7Hr1G087250.5 , HORVU7Hr1G087250.4 , HORVU7Hr1G087250.7 , HORVU7Hr1G087250.2 , HORVU7Hr1G087240.1 , HORVU7Hr1G087260.1 , HORVU7Hr1G087260.2 , HORVU5Hr1G057800.5 , HORVU5Hr1G057800.3 , HORVU5Hr1G057800.2 , HORVU7Hr1G087250.1 , HORVU7Hr1G087250.3 , HORVU7Hr1G087250.6
Wheat TraesCS5A02G191200 , TraesCS7D02G361300 , TraesCS7A02G361600 , TraesCS7B02G265200 , TraesCS7A02G361800 , TraesCS7B02G265300 , TraesCS7D02G361200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G018900 terpene synthase, putative, expressed K15086: (3S)-linalool synthase
2 Sobic.006G027500 terpene synthase, putative, expressed -
3 Sobic.005G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K08249: hydroxymandelonitrile lyase
4 Sobic.008G080600 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
5 Sobic.006G007100 cysteine proteinase At4g11310 precursor, putative, expressed -
6 Sobic.004G019100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K15086: (3S)-linalool synthase
7 Sobic.006G007600 polyphenol oxidase, putative, expressed -
8 Sobic.006G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
9 Sobic.001G291500 - -
10 Sobic.005G219100 patatin, putative, expressed -
11 Sobic.002G108400 cytochrome P450, putative, expressed -
12 Sobic.004G019400 Protein terpene synthase 14 (At)(PubMedID : 27208977)@"Protein terpene synthase 14, S-linalool synthase (Os)"(PubMedID : 27208977)@terpene synthase, putative, expressed -
13 Sobic.008G060200 receptor-like protein kinase 5 precursor, putative, expressed -
14 Sobic.007G037800 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.005G219000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@patatin, putative, expressed -
16 Sobic.005G193500 receptor-like kinase, putative, expressed -
17 Sobic.003G388400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.009G252100 expressed protein -
19 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
20 Sobic.004G245300 - -


Gene co-expression network
sample Sobic010G171900 Sobic010G171900 Sobic004G018900 Sobic004G018900 Sobic010G171900--Sobic004G018900 Sobic006G027500 Sobic006G027500 Sobic010G171900--Sobic006G027500 Sobic005G186500 Sobic005G186500 Sobic010G171900--Sobic005G186500 Sobic008G080600 Sobic008G080600 Sobic010G171900--Sobic008G080600 Sobic006G007100 Sobic006G007100 Sobic010G171900--Sobic006G007100 Sobic004G019100 Sobic004G019100 Sobic010G171900--Sobic004G019100 Sobic006G007600 Sobic006G007600 Sobic010G171900--Sobic006G007600 Sobic006G005400 Sobic006G005400 Sobic010G171900--Sobic006G005400 Sobic001G291500 Sobic001G291500 Sobic010G171900--Sobic001G291500 Sobic004G018900--Sobic010G171900 Sobic004G018900--Sobic006G027500 Sobic004G018900--Sobic005G186500 Sobic004G018900--Sobic008G080600 Sobic004G245300 Sobic004G245300 Sobic004G018900--Sobic004G245300 Sobic008G060200 Sobic008G060200 Sobic004G018900--Sobic008G060200 Sobic005G065500 Sobic005G065500 Sobic004G018900--Sobic005G065500 Sobic006G180800 Sobic006G180800 Sobic004G018900--Sobic006G180800 Sobic004G018900--Sobic004G019100 Sobic006G027500--Sobic010G171900 Sobic006G027500--Sobic004G018900 Sobic006G027500--Sobic005G186500 Sobic006G027500--Sobic008G080600 Sobic006G027500--Sobic006G007100 Sobic006G027500--Sobic004G019100 Sobic006G027500--Sobic006G005400 Sobic006G027500--Sobic001G291500 Sobic006G027500--Sobic006G007600 Sobic005G186500--Sobic006G005400 Sobic005G186500--Sobic006G007100 Sobic005G186500--Sobic006G007600 Sobic005G186500--Sobic010G171900 Sobic005G186500--Sobic006G027500 Sobic005G186500--Sobic004G019100 Sobic005G186500--Sobic004G018900 Sobic005G219100 Sobic005G219100 Sobic005G186500--Sobic005G219100 Sobic004G019400 Sobic004G019400 Sobic005G186500--Sobic004G019400 Sobic008G080600--Sobic006G027500 Sobic008G080600--Sobic010G171900 Sobic008G036300 Sobic008G036300 Sobic008G080600--Sobic008G036300 Sobic008G080400 Sobic008G080400 Sobic008G080600--Sobic008G080400 Sobic008G080600--Sobic004G018900 Sobic004G182700 Sobic004G182700 Sobic008G080600--Sobic004G182700 Sobic005G167500 Sobic005G167500 Sobic008G080600--Sobic005G167500 Sobic008G080600--Sobic005G186500 Sobic005G192600 Sobic005G192600 Sobic008G080600--Sobic005G192600 Sobic006G007100--Sobic006G005400 Sobic006G007100--Sobic005G219100 Sobic006G007100--Sobic006G007600 Sobic005G219000 Sobic005G219000 Sobic006G007100--Sobic005G219000 Sobic001G125700 Sobic001G125700 Sobic006G007100--Sobic001G125700 Sobic006G005500 Sobic006G005500 Sobic006G007100--Sobic006G005500 Sobic006G007100--Sobic001G291500 Sobic008G028600 Sobic008G028600 Sobic006G007100--Sobic008G028600 Sobic008G077800 Sobic008G077800 Sobic006G007100--Sobic008G077800 Sobic004G019100--Sobic006G007100 Sobic004G019100--Sobic006G005400 Sobic004G019100--Sobic001G291500 Sobic004G019100--Sobic005G219100 Sobic004G019100--Sobic005G186500 Sobic004G019100--Sobic006G027500 Sobic004G019100--Sobic006G007600 Sobic004G019100--Sobic005G219000 Sobic003G388400 Sobic003G388400 Sobic004G019100--Sobic003G388400 Sobic006G007600--Sobic006G007100 Sobic006G007600--Sobic006G005400 Sobic006G007600--Sobic005G219100 Sobic006G007600--Sobic001G125700 Sobic006G007600--Sobic005G219000 Sobic006G007600--Sobic006G005500 Sobic009G115400 Sobic009G115400 Sobic006G007600--Sobic009G115400 Sobic006G007600--Sobic001G291500 Sobic006G007600--Sobic005G186500 Sobic006G005400--Sobic006G007100 Sobic006G005400--Sobic005G219100 Sobic006G005400--Sobic001G125700 Sobic006G005400--Sobic005G219000 Sobic006G005400--Sobic006G005500 Sobic006G005400--Sobic006G007600 Sobic006G005400--Sobic009G115400 Sobic006G005400--Sobic003G388400 Sobic006G005400--Sobic001G291500 Sobic001G291500--Sobic006G007100 Sobic001G291500--Sobic005G219100 Sobic001G291500--Sobic005G219000 Sobic001G291500--Sobic006G005400 Sobic001G291500--Sobic001G125700 Sobic001G291500--Sobic006G005500 Sobic006G007300 Sobic006G007300 Sobic001G291500--Sobic006G007300 Sobic001G432500 Sobic001G432500 Sobic001G291500--Sobic001G432500 Sobic001G291500--Sobic008G077800
Octagon: transcription factors


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