Gene annotation
Transcriptome id Sobic.006G027500.2,Sobic.006G027500.1
Synonym Sb06g002820
Functional annotation terpene synthase, putative, expressed
UniProt C5YCU0 , A0A1Z5RBU6
Pfam PF01397 PF03936
Panther DB PTHR31225 PTHR31225:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016829; lyase activity GO:0010333terpene synthase activity GO:0008152metabolic process GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT3G25810 : Terpenoid cyclases/Protein prenyltransferases superfamily protein
RAP-DB (Rice) LOC_Os01g23530.1 : terpene synthase, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT60507 , KQJ81472
Barley HORVU2Hr1G003390.1 , HORVU2Hr1G003390.3 , HORVU2Hr1G003390.2
Wheat TraesCS2A02G022400 , TraesCS2D02G023800
Populus -


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cDNA sequences
Sobic.006G027500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G171900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase (Os)(PubMedID : 27208977)@L-ascorbate oxidase precursor, putative, expressed -
2 Sobic.004G018900 terpene synthase, putative, expressed K15086: (3S)-linalool synthase
3 Sobic.005G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K08249: hydroxymandelonitrile lyase
4 Sobic.008G080600 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
5 Sobic.006G007100 cysteine proteinase At4g11310 precursor, putative, expressed -
6 Sobic.004G019100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K15086: (3S)-linalool synthase
7 Sobic.006G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
8 Sobic.001G291500 - -
9 Sobic.006G007600 polyphenol oxidase, putative, expressed -
10 Sobic.005G219100 patatin, putative, expressed -
11 Sobic.008G145200 aspartic proteinase nepenthesin precursor, putative, expressed -
12 Sobic.006G007300 - -
13 Sobic.005G219000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@patatin, putative, expressed -
14 Sobic.008G028566 - -
15 Sobic.002G224300 no apical meristem protein, putative, expressed -
16 Sobic.008G077800 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
18 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
19 Sobic.003G388400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
20 Sobic.002G108400 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic006G027500 Sobic006G027500 Sobic010G171900 Sobic010G171900 Sobic006G027500--Sobic010G171900 Sobic004G018900 Sobic004G018900 Sobic006G027500--Sobic004G018900 Sobic005G186500 Sobic005G186500 Sobic006G027500--Sobic005G186500 Sobic008G080600 Sobic008G080600 Sobic006G027500--Sobic008G080600 Sobic006G007100 Sobic006G007100 Sobic006G027500--Sobic006G007100 Sobic004G019100 Sobic004G019100 Sobic006G027500--Sobic004G019100 Sobic006G005400 Sobic006G005400 Sobic006G027500--Sobic006G005400 Sobic001G291500 Sobic001G291500 Sobic006G027500--Sobic001G291500 Sobic006G007600 Sobic006G007600 Sobic006G027500--Sobic006G007600 Sobic010G171900--Sobic004G018900 Sobic010G171900--Sobic006G027500 Sobic010G171900--Sobic005G186500 Sobic010G171900--Sobic008G080600 Sobic010G171900--Sobic006G007100 Sobic010G171900--Sobic004G019100 Sobic010G171900--Sobic006G007600 Sobic010G171900--Sobic006G005400 Sobic010G171900--Sobic001G291500 Sobic004G018900--Sobic010G171900 Sobic004G018900--Sobic006G027500 Sobic004G018900--Sobic005G186500 Sobic004G018900--Sobic008G080600 Sobic004G245300 Sobic004G245300 Sobic004G018900--Sobic004G245300 Sobic008G060200 Sobic008G060200 Sobic004G018900--Sobic008G060200 Sobic005G065500 Sobic005G065500 Sobic004G018900--Sobic005G065500 Sobic006G180800 Sobic006G180800 Sobic004G018900--Sobic006G180800 Sobic004G018900--Sobic004G019100 Sobic005G186500--Sobic006G005400 Sobic005G186500--Sobic006G007100 Sobic005G186500--Sobic006G007600 Sobic005G186500--Sobic010G171900 Sobic005G186500--Sobic006G027500 Sobic005G186500--Sobic004G019100 Sobic005G186500--Sobic004G018900 Sobic005G219100 Sobic005G219100 Sobic005G186500--Sobic005G219100 Sobic004G019400 Sobic004G019400 Sobic005G186500--Sobic004G019400 Sobic008G080600--Sobic006G027500 Sobic008G080600--Sobic010G171900 Sobic008G036300 Sobic008G036300 Sobic008G080600--Sobic008G036300 Sobic008G080400 Sobic008G080400 Sobic008G080600--Sobic008G080400 Sobic008G080600--Sobic004G018900 Sobic004G182700 Sobic004G182700 Sobic008G080600--Sobic004G182700 Sobic005G167500 Sobic005G167500 Sobic008G080600--Sobic005G167500 Sobic008G080600--Sobic005G186500 Sobic005G192600 Sobic005G192600 Sobic008G080600--Sobic005G192600 Sobic006G007100--Sobic006G005400 Sobic006G007100--Sobic005G219100 Sobic006G007100--Sobic006G007600 Sobic005G219000 Sobic005G219000 Sobic006G007100--Sobic005G219000 Sobic001G125700 Sobic001G125700 Sobic006G007100--Sobic001G125700 Sobic006G005500 Sobic006G005500 Sobic006G007100--Sobic006G005500 Sobic006G007100--Sobic001G291500 Sobic008G028600 Sobic008G028600 Sobic006G007100--Sobic008G028600 Sobic008G077800 Sobic008G077800 Sobic006G007100--Sobic008G077800 Sobic004G019100--Sobic006G007100 Sobic004G019100--Sobic006G005400 Sobic004G019100--Sobic001G291500 Sobic004G019100--Sobic005G219100 Sobic004G019100--Sobic005G186500 Sobic004G019100--Sobic006G027500 Sobic004G019100--Sobic006G007600 Sobic004G019100--Sobic005G219000 Sobic003G388400 Sobic003G388400 Sobic004G019100--Sobic003G388400 Sobic006G005400--Sobic006G007100 Sobic006G005400--Sobic005G219100 Sobic006G005400--Sobic001G125700 Sobic006G005400--Sobic005G219000 Sobic006G005400--Sobic006G005500 Sobic006G005400--Sobic006G007600 Sobic009G115400 Sobic009G115400 Sobic006G005400--Sobic009G115400 Sobic006G005400--Sobic003G388400 Sobic006G005400--Sobic001G291500 Sobic001G291500--Sobic006G007100 Sobic001G291500--Sobic005G219100 Sobic001G291500--Sobic005G219000 Sobic001G291500--Sobic006G005400 Sobic001G291500--Sobic001G125700 Sobic001G291500--Sobic006G005500 Sobic006G007300 Sobic006G007300 Sobic001G291500--Sobic006G007300 Sobic001G432500 Sobic001G432500 Sobic001G291500--Sobic001G432500 Sobic001G291500--Sobic008G077800 Sobic006G007600--Sobic006G007100 Sobic006G007600--Sobic006G005400 Sobic006G007600--Sobic005G219100 Sobic006G007600--Sobic001G125700 Sobic006G007600--Sobic005G219000 Sobic006G007600--Sobic006G005500 Sobic006G007600--Sobic009G115400 Sobic006G007600--Sobic001G291500 Sobic006G007600--Sobic005G186500
Octagon: transcription factors


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