Gene annotation
Transcriptome id Sobic.009G252100.1,Sobic.009G252100.2
Synonym Sb09g030280
Functional annotation expressed protein
UniProt A0A1B6PAJ6 , C5YWX2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g44230.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
2 Sobic.005G193600 3 Ketoacyl CoA synthetase 2 KCS2 (fatty acid elongase) (At)(PubMedID : 27208977)@3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
3 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -
4 Sobic.002G041800 gibberellin receptor GID1L2, putative, expressed -
5 Sobic.007G037800 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
6 Sobic.004G195800 heavy metal associated domain containing protein, expressed -
7 Sobic.006G060800 basic proline-rich protein, putative, expressed -
8 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase
9 Sobic.010G225500 - -
10 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
11 Sobic.002G202700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed -
12 Sobic.002G209100 glutamate receptor, putative, expressed -
13 Sobic.001G291500 - -
14 Sobic.006G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
15 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
16 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.003G388400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.005G085500 - -
19 Sobic.002G108400 cytochrome P450, putative, expressed -
20 Sobic.007G129201 - -


Gene co-expression network
sample Sobic009G252100 Sobic009G252100 Sobic001G201800 Sobic001G201800 Sobic009G252100--Sobic001G201800 Sobic005G193600 Sobic005G193600 Sobic009G252100--Sobic005G193600 Sobic008G060300 Sobic008G060300 Sobic009G252100--Sobic008G060300 Sobic002G041800 Sobic002G041800 Sobic009G252100--Sobic002G041800 Sobic007G037800 Sobic007G037800 Sobic009G252100--Sobic007G037800 Sobic004G195800 Sobic004G195800 Sobic009G252100--Sobic004G195800 Sobic006G060800 Sobic006G060800 Sobic009G252100--Sobic006G060800 Sobic004G078600 Sobic004G078600 Sobic009G252100--Sobic004G078600 Sobic010G225500 Sobic010G225500 Sobic009G252100--Sobic010G225500 Sobic001G201800--Sobic004G078600 Sobic009G115400 Sobic009G115400 Sobic001G201800--Sobic009G115400 Sobic002G423600 Sobic002G423600 Sobic001G201800--Sobic002G423600 Sobic001G012000 Sobic001G012000 Sobic001G201800--Sobic001G012000 Sobic001G201800--Sobic009G252100 Sobic002G202700 Sobic002G202700 Sobic001G201800--Sobic002G202700 Sobic006G045000 Sobic006G045000 Sobic001G201800--Sobic006G045000 Sobic001G056400 Sobic001G056400 Sobic001G201800--Sobic001G056400 Sobic002G108400 Sobic002G108400 Sobic001G201800--Sobic002G108400 Sobic005G193600--Sobic009G252100 Sobic005G193600--Sobic008G060300 Sobic005G193600--Sobic001G012000 Sobic005G193600--Sobic001G201800 Sobic008G181801 Sobic008G181801 Sobic005G193600--Sobic008G181801 Sobic006G229500 Sobic006G229500 Sobic005G193600--Sobic006G229500 SobicK044407 SobicK044407 Sobic005G193600--SobicK044407 Sobic001G381300 Sobic001G381300 Sobic005G193600--Sobic001G381300 Sobic005G193500 Sobic005G193500 Sobic005G193600--Sobic005G193500 Sobic008G060300--Sobic006G060800 Sobic008G060300--Sobic009G252100 Sobic008G060300--Sobic005G193600 Sobic008G060300--Sobic001G201800 Sobic008G060300--Sobic002G202700 Sobic007G129201 Sobic007G129201 Sobic008G060300--Sobic007G129201 Sobic008G060300--Sobic005G193500 Sobic008G060300--Sobic004G195800 Sobic003G366100 Sobic003G366100 Sobic008G060300--Sobic003G366100 Sobic005G085500 Sobic005G085500 Sobic002G041800--Sobic005G085500 Sobic002G041800--Sobic004G078600 Sobic002G041800--Sobic002G423600 Sobic002G041800--Sobic004G195800 Sobic002G041800--Sobic009G252100 Sobic004G217700 Sobic004G217700 Sobic002G041800--Sobic004G217700 Sobic002G209100 Sobic002G209100 Sobic002G041800--Sobic002G209100 Sobic002G041800--Sobic006G060800 Sobic002G041800--Sobic001G201800 Sobic007G037800--Sobic009G252100 Sobic009G202400 Sobic009G202400 Sobic007G037800--Sobic009G202400 Sobic004G019400 Sobic004G019400 Sobic007G037800--Sobic004G019400 Sobic004G210601 Sobic004G210601 Sobic007G037800--Sobic004G210601 Sobic008G060200 Sobic008G060200 Sobic007G037800--Sobic008G060200 Sobic007G037800--Sobic008G060300 Sobic005G093300 Sobic005G093300 Sobic007G037800--Sobic005G093300 Sobic007G037800--Sobic007G129201 Sobic007G037800--Sobic005G193500 Sobic004G195800--Sobic002G209100 Sobic004G195800--Sobic002G041800 Sobic004G195800--Sobic005G085500 Sobic004G195800--Sobic009G252100 Sobic010G120800 Sobic010G120800 Sobic004G195800--Sobic010G120800 Sobic004G195800--Sobic004G217700 Sobic004G195800--Sobic001G201800 Sobic004G187300 Sobic004G187300 Sobic004G195800--Sobic004G187300 Sobic004G195800--Sobic005G193600 Sobic006G060800--Sobic008G060300 Sobic006G060800--Sobic009G252100 Sobic006G060800--Sobic002G041800 Sobic004G063200 Sobic004G063200 Sobic006G060800--Sobic004G063200 Sobic006G060800--Sobic001G201800 Sobic006G060800--Sobic004G078600 Sobic007G089300 Sobic007G089300 Sobic006G060800--Sobic007G089300 Sobic001G145050 Sobic001G145050 Sobic006G060800--Sobic001G145050 Sobic002G366100 Sobic002G366100 Sobic006G060800--Sobic002G366100 Sobic004G078600--Sobic001G201800 Sobic004G078600--Sobic002G423600 Sobic004G078600--Sobic009G115400 Sobic004G078600--Sobic002G041800 Sobic009G075100 Sobic009G075100 Sobic004G078600--Sobic009G075100 Sobic005G182701 Sobic005G182701 Sobic004G078600--Sobic005G182701 Sobic004G078600--Sobic001G012000 Sobic004G078600--Sobic009G252100 Sobic007G055600 Sobic007G055600 Sobic004G078600--Sobic007G055600 Sobic001G432500 Sobic001G432500 Sobic010G225500--Sobic001G432500 Sobic010G225500--Sobic002G202700 Sobic009G115300 Sobic009G115300 Sobic010G225500--Sobic009G115300 Sobic001G291500 Sobic001G291500 Sobic010G225500--Sobic001G291500 Sobic006G123400 Sobic006G123400 Sobic010G225500--Sobic006G123400 Sobic010G225500--Sobic009G115400 Sobic006G005500 Sobic006G005500 Sobic010G225500--Sobic006G005500 Sobic010G225500--Sobic002G108400 Sobic001G125700 Sobic001G125700 Sobic010G225500--Sobic001G125700
Octagon: transcription factors


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