Gene annotation
Transcriptome id Sobic.005G085500.1,Sobic.005G085500.3,Sobic.005G085500.2,Sobic.005G085500.4
Synonym
Functional annotation -
UniProt A0A1B6PR09
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G041800 gibberellin receptor GID1L2, putative, expressed -
2 Sobic.008G181801 - -
3 Sobic.K044407 - -
4 Sobic.004G195800 heavy metal associated domain containing protein, expressed -
5 Sobic.002G209100 glutamate receptor, putative, expressed -
6 Sobic.006G045000 drought-induced protein 1, putative, expressed -
7 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
8 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
9 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase
10 Sobic.010G120800 Leucine-rich repeat receptor-like serine/threonine/tyrosine protein kinase(PubMedID : 31721651)@protein kinase domain containing protein, expressed -
11 Sobic.003G378301 - K17362: acyl-coenzyme A thioesterase 13
12 Sobic.005G193600 3 Ketoacyl CoA synthetase 2 KCS2 (fatty acid elongase) (At)(PubMedID : 27208977)@3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
13 Sobic.002G173900 hydroquinone glucosyltransferase, putative, expressed K08237: hydroquinone glucosyltransferase
14 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
15 Sobic.003G310200 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
16 Sobic.009G252100 expressed protein -
17 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
18 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.001G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
20 Sobic.006G123400 expressed protein -


Gene co-expression network
sample Sobic005G085500 Sobic005G085500 Sobic002G041800 Sobic002G041800 Sobic005G085500--Sobic002G041800 Sobic008G181801 Sobic008G181801 Sobic005G085500--Sobic008G181801 SobicK044407 SobicK044407 Sobic005G085500--SobicK044407 Sobic004G195800 Sobic004G195800 Sobic005G085500--Sobic004G195800 Sobic002G209100 Sobic002G209100 Sobic005G085500--Sobic002G209100 Sobic006G045000 Sobic006G045000 Sobic005G085500--Sobic006G045000 Sobic001G012000 Sobic001G012000 Sobic005G085500--Sobic001G012000 Sobic002G423600 Sobic002G423600 Sobic005G085500--Sobic002G423600 Sobic004G078600 Sobic004G078600 Sobic005G085500--Sobic004G078600 Sobic002G041800--Sobic005G085500 Sobic002G041800--Sobic004G078600 Sobic002G041800--Sobic002G423600 Sobic002G041800--Sobic004G195800 Sobic009G252100 Sobic009G252100 Sobic002G041800--Sobic009G252100 Sobic004G217700 Sobic004G217700 Sobic002G041800--Sobic004G217700 Sobic002G041800--Sobic002G209100 Sobic006G060800 Sobic006G060800 Sobic002G041800--Sobic006G060800 Sobic001G201800 Sobic001G201800 Sobic002G041800--Sobic001G201800 Sobic008G181801--SobicK044407 Sobic009G241500 Sobic009G241500 Sobic008G181801--Sobic009G241500 Sobic008G181801--Sobic001G012000 Sobic008G181801--Sobic006G045000 Sobic005G226100 Sobic005G226100 Sobic008G181801--Sobic005G226100 Sobic008G181801--Sobic005G085500 Sobic003G310200 Sobic003G310200 Sobic008G181801--Sobic003G310200 Sobic005G082700 Sobic005G082700 Sobic008G181801--Sobic005G082700 Sobic003G037100 Sobic003G037100 Sobic008G181801--Sobic003G037100 SobicK044407--Sobic001G012000 Sobic001G056400 Sobic001G056400 SobicK044407--Sobic001G056400 SobicK044407--Sobic008G181801 SobicK044407--Sobic006G045000 Sobic003G378301 Sobic003G378301 SobicK044407--Sobic003G378301 SobicK044407--Sobic003G310200 Sobic005G182701 Sobic005G182701 SobicK044407--Sobic005G182701 SobicK044407--Sobic002G423600 Sobic007G055600 Sobic007G055600 SobicK044407--Sobic007G055600 Sobic004G195800--Sobic002G209100 Sobic004G195800--Sobic002G041800 Sobic004G195800--Sobic005G085500 Sobic004G195800--Sobic009G252100 Sobic010G120800 Sobic010G120800 Sobic004G195800--Sobic010G120800 Sobic004G195800--Sobic004G217700 Sobic004G195800--Sobic001G201800 Sobic004G187300 Sobic004G187300 Sobic004G195800--Sobic004G187300 Sobic005G193600 Sobic005G193600 Sobic004G195800--Sobic005G193600 Sobic002G209100--Sobic004G195800 Sobic002G209100--Sobic002G041800 Sobic002G209100--Sobic005G085500 Sobic002G209100--Sobic010G120800 Sobic002G209100--Sobic009G252100 Sobic002G209100--Sobic004G217700 Sobic002G271600 Sobic002G271600 Sobic002G209100--Sobic002G271600 Sobic004G209500 Sobic004G209500 Sobic002G209100--Sobic004G209500 Sobic002G257100 Sobic002G257100 Sobic002G209100--Sobic002G257100 Sobic006G045000--SobicK044407 Sobic006G045000--Sobic001G012000 Sobic006G045000--Sobic001G056400 Sobic006G045000--Sobic008G181801 Sobic006G045000--Sobic002G423600 Sobic006G045000--Sobic003G378301 Sobic006G045000--Sobic005G182701 Sobic006G045000--Sobic001G201800 Sobic006G045000--Sobic004G217700 Sobic001G012000--SobicK044407 Sobic001G012000--Sobic001G056400 Sobic001G012000--Sobic006G045000 Sobic001G012000--Sobic005G182701 Sobic009G115300 Sobic009G115300 Sobic001G012000--Sobic009G115300 Sobic001G012000--Sobic002G423600 Sobic001G012000--Sobic008G181801 Sobic001G012000--Sobic003G310200 Sobic009G115400 Sobic009G115400 Sobic001G012000--Sobic009G115400 Sobic002G423600--Sobic001G056400 Sobic002G423600--Sobic005G182701 Sobic002G423600--Sobic001G201800 Sobic002G423600--Sobic001G012000 Sobic002G423600--Sobic004G078600 Sobic002G423600--Sobic004G217700 Sobic002G423600--Sobic007G055600 Sobic002G423600--SobicK044407 Sobic002G423600--Sobic006G045000 Sobic004G078600--Sobic001G201800 Sobic004G078600--Sobic002G423600 Sobic004G078600--Sobic009G115400 Sobic004G078600--Sobic002G041800 Sobic009G075100 Sobic009G075100 Sobic004G078600--Sobic009G075100 Sobic004G078600--Sobic005G182701 Sobic004G078600--Sobic001G012000 Sobic004G078600--Sobic009G252100 Sobic004G078600--Sobic007G055600
Octagon: transcription factors


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