Gene annotation
Transcriptome id Sobic.004G209500.1
Synonym Sb04g025510
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XX92
Pfam PF06749
Panther DB PTHR31769 PTHR31769:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G17210 : Protein of unknown function (DUF1218)
RAP-DB (Rice) LOC_Os05g35930.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G216050 - -
2 Sobic.006G045000 drought-induced protein 1, putative, expressed -
3 Sobic.010G214200 OsFBK17 - F-box domain and kelch repeat containing protein, expressed -
4 Sobic.003G310500 DUF567 domain containing protein, putative, expressed -
5 Sobic.005G085500 - -
6 Sobic.009G233900 dehydrogenase, putative, expressed -
7 Sobic.002G216500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
8 Sobic.002G209100 glutamate receptor, putative, expressed -
9 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
10 Sobic.004G195800 heavy metal associated domain containing protein, expressed -
11 Sobic.001G315800 shikimate/quinate 5-dehydrogenase, putative, expressed -
12 Sobic.002G349400 - -
13 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
14 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
15 Sobic.K044407 - -
16 Sobic.002G041800 gibberellin receptor GID1L2, putative, expressed -
17 Sobic.008G181801 - -
18 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
19 Sobic.003G248901 - -
20 Sobic.008G111300 transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic004G209500 Sobic004G209500 Sobic009G216050 Sobic009G216050 Sobic004G209500--Sobic009G216050 Sobic006G045000 Sobic006G045000 Sobic004G209500--Sobic006G045000 Sobic010G214200 Sobic010G214200 Sobic004G209500--Sobic010G214200 Sobic003G310500 Sobic003G310500 Sobic004G209500--Sobic003G310500 Sobic005G085500 Sobic005G085500 Sobic004G209500--Sobic005G085500 Sobic009G233900 Sobic009G233900 Sobic004G209500--Sobic009G233900 Sobic002G216500 Sobic002G216500 Sobic004G209500--Sobic002G216500 Sobic002G209100 Sobic002G209100 Sobic004G209500--Sobic002G209100 Sobic004G217700 Sobic004G217700 Sobic004G209500--Sobic004G217700 Sobic009G216050--Sobic004G209500 Sobic009G216050--Sobic006G045000 Sobic009G067400 Sobic009G067400 Sobic009G216050--Sobic009G067400 Sobic004G101000 Sobic004G101000 Sobic009G216050--Sobic004G101000 Sobic009G216050--Sobic004G217700 Sobic004G174000 Sobic004G174000 Sobic009G216050--Sobic004G174000 SobicK044407 SobicK044407 Sobic009G216050--SobicK044407 Sobic002G407200 Sobic002G407200 Sobic009G216050--Sobic002G407200 Sobic008G181801 Sobic008G181801 Sobic009G216050--Sobic008G181801 Sobic006G045000--SobicK044407 Sobic001G012000 Sobic001G012000 Sobic006G045000--Sobic001G012000 Sobic001G056400 Sobic001G056400 Sobic006G045000--Sobic001G056400 Sobic006G045000--Sobic008G181801 Sobic002G423600 Sobic002G423600 Sobic006G045000--Sobic002G423600 Sobic003G378301 Sobic003G378301 Sobic006G045000--Sobic003G378301 Sobic005G182701 Sobic005G182701 Sobic006G045000--Sobic005G182701 Sobic001G201800 Sobic001G201800 Sobic006G045000--Sobic001G201800 Sobic006G045000--Sobic004G217700 Sobic010G214200--Sobic006G045000 Sobic010G214200--Sobic004G209500 Sobic010G214200--Sobic004G217700 Sobic001G056500 Sobic001G056500 Sobic010G214200--Sobic001G056500 Sobic010G214200--Sobic002G216500 Sobic004G195800 Sobic004G195800 Sobic010G214200--Sobic004G195800 Sobic010G214200--Sobic002G423600 Sobic010G214200--Sobic003G310500 Sobic010G214200--SobicK044407 Sobic003G310500--Sobic001G056500 Sobic008G038100 Sobic008G038100 Sobic003G310500--Sobic008G038100 Sobic003G310500--Sobic004G209500 Sobic003G310500--Sobic010G214200 Sobic003G310500--Sobic009G216050 Sobic003G310500--Sobic002G216500 Sobic003G310500--Sobic006G045000 Sobic008G181300 Sobic008G181300 Sobic003G310500--Sobic008G181300 Sobic006G014700 Sobic006G014700 Sobic003G310500--Sobic006G014700 Sobic002G041800 Sobic002G041800 Sobic005G085500--Sobic002G041800 Sobic005G085500--Sobic008G181801 Sobic005G085500--SobicK044407 Sobic005G085500--Sobic004G195800 Sobic005G085500--Sobic002G209100 Sobic005G085500--Sobic006G045000 Sobic005G085500--Sobic001G012000 Sobic005G085500--Sobic002G423600 Sobic004G078600 Sobic004G078600 Sobic005G085500--Sobic004G078600 Sobic009G233900--Sobic001G056500 Sobic009G075100 Sobic009G075100 Sobic009G233900--Sobic009G075100 Sobic009G233900--Sobic004G209500 Sobic009G233900--Sobic002G423600 Sobic009G233900--Sobic004G078600 Sobic009G233900--Sobic004G217700 Sobic009G233900--Sobic001G201800 Sobic001G449800 Sobic001G449800 Sobic009G233900--Sobic001G449800 Sobic009G115400 Sobic009G115400 Sobic009G233900--Sobic009G115400 Sobic004G220600 Sobic004G220600 Sobic002G216500--Sobic004G220600 Sobic002G216500--Sobic006G045000 Sobic005G218500 Sobic005G218500 Sobic002G216500--Sobic005G218500 Sobic002G216500--Sobic010G214200 Sobic002G216500--Sobic004G209500 Sobic002G216500--Sobic006G014700 Sobic002G216500--Sobic003G378301 Sobic002G216500--Sobic003G310500 Sobic002G216500--Sobic004G217700 Sobic002G209100--Sobic004G195800 Sobic002G209100--Sobic002G041800 Sobic002G209100--Sobic005G085500 Sobic010G120800 Sobic010G120800 Sobic002G209100--Sobic010G120800 Sobic009G252100 Sobic009G252100 Sobic002G209100--Sobic009G252100 Sobic002G209100--Sobic004G217700 Sobic002G271600 Sobic002G271600 Sobic002G209100--Sobic002G271600 Sobic002G209100--Sobic004G209500 Sobic002G257100 Sobic002G257100 Sobic002G209100--Sobic002G257100 Sobic004G217700--Sobic002G423600 Sobic004G217700--Sobic001G056500 Sobic004G217700--Sobic001G056400 Sobic004G217700--Sobic003G378301 Sobic004G217700--Sobic005G182701 Sobic004G217700--SobicK044407 Sobic004G217700--Sobic006G045000 Sobic001G410450 Sobic001G410450 Sobic004G217700--Sobic001G410450 Sobic004G217700--Sobic002G041800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.