Gene annotation
Transcriptome id Sobic.010G214200.1
Synonym AFR, Sb10g026080
Functional annotation OsFBK17 - F-box domain and kelch repeat containing protein, expressed
UniProt C5Z777
Pfam PF00646
Panther DB PTHR24414 PTHR24414:SF31
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G24540 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os06g44500.1 : OsFBK17 - F-box domain and kelch repeat containing protein, expressed
MaizeGDB (Corn) Zm00025a051713 , Zm00025a051712
Brachypodium KQK16887
Barley -
Wheat TraesCS5A02G544300
Populus -


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cDNA sequences
Sobic.010G214200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G045000 drought-induced protein 1, putative, expressed -
2 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
4 Sobic.001G056500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
5 Sobic.002G216500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.004G195800 heavy metal associated domain containing protein, expressed -
7 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
8 Sobic.003G310500 DUF567 domain containing protein, putative, expressed -
9 Sobic.K044407 - -
10 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
11 Sobic.003G248901 - -
12 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
13 Sobic.003G378301 - K17362: acyl-coenzyme A thioesterase 13
14 Sobic.001G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
15 Sobic.009G216050 - -
16 Sobic.008G018600 harpin-induced protein 1 domain containing protein, expressed -
17 Sobic.001G320700 prephenate dehydratase domain containing protein, expressed -
18 Sobic.005G182701 - -
19 Sobic.002G209100 glutamate receptor, putative, expressed -
20 Sobic.002G041800 gibberellin receptor GID1L2, putative, expressed -


Gene co-expression network
sample Sobic010G214200 Sobic010G214200 Sobic006G045000 Sobic006G045000 Sobic010G214200--Sobic006G045000 Sobic004G209500 Sobic004G209500 Sobic010G214200--Sobic004G209500 Sobic004G217700 Sobic004G217700 Sobic010G214200--Sobic004G217700 Sobic001G056500 Sobic001G056500 Sobic010G214200--Sobic001G056500 Sobic002G216500 Sobic002G216500 Sobic010G214200--Sobic002G216500 Sobic004G195800 Sobic004G195800 Sobic010G214200--Sobic004G195800 Sobic002G423600 Sobic002G423600 Sobic010G214200--Sobic002G423600 Sobic003G310500 Sobic003G310500 Sobic010G214200--Sobic003G310500 SobicK044407 SobicK044407 Sobic010G214200--SobicK044407 Sobic006G045000--SobicK044407 Sobic001G012000 Sobic001G012000 Sobic006G045000--Sobic001G012000 Sobic001G056400 Sobic001G056400 Sobic006G045000--Sobic001G056400 Sobic008G181801 Sobic008G181801 Sobic006G045000--Sobic008G181801 Sobic006G045000--Sobic002G423600 Sobic003G378301 Sobic003G378301 Sobic006G045000--Sobic003G378301 Sobic005G182701 Sobic005G182701 Sobic006G045000--Sobic005G182701 Sobic001G201800 Sobic001G201800 Sobic006G045000--Sobic001G201800 Sobic006G045000--Sobic004G217700 Sobic009G216050 Sobic009G216050 Sobic004G209500--Sobic009G216050 Sobic004G209500--Sobic006G045000 Sobic004G209500--Sobic010G214200 Sobic004G209500--Sobic003G310500 Sobic005G085500 Sobic005G085500 Sobic004G209500--Sobic005G085500 Sobic009G233900 Sobic009G233900 Sobic004G209500--Sobic009G233900 Sobic004G209500--Sobic002G216500 Sobic002G209100 Sobic002G209100 Sobic004G209500--Sobic002G209100 Sobic004G209500--Sobic004G217700 Sobic004G217700--Sobic002G423600 Sobic004G217700--Sobic001G056500 Sobic004G217700--Sobic001G056400 Sobic004G217700--Sobic003G378301 Sobic004G217700--Sobic005G182701 Sobic004G217700--SobicK044407 Sobic004G217700--Sobic006G045000 Sobic001G410450 Sobic001G410450 Sobic004G217700--Sobic001G410450 Sobic002G041800 Sobic002G041800 Sobic004G217700--Sobic002G041800 Sobic009G014600 Sobic009G014600 Sobic001G056500--Sobic009G014600 Sobic001G056500--Sobic005G182701 Sobic007G055600 Sobic007G055600 Sobic001G056500--Sobic007G055600 Sobic001G056500--Sobic001G056400 Sobic001G056500--Sobic004G217700 Sobic007G076000 Sobic007G076000 Sobic001G056500--Sobic007G076000 Sobic001G056500--Sobic002G423600 Sobic006G005500 Sobic006G005500 Sobic001G056500--Sobic006G005500 Sobic001G125700 Sobic001G125700 Sobic001G056500--Sobic001G125700 Sobic004G220600 Sobic004G220600 Sobic002G216500--Sobic004G220600 Sobic002G216500--Sobic006G045000 Sobic005G218500 Sobic005G218500 Sobic002G216500--Sobic005G218500 Sobic002G216500--Sobic010G214200 Sobic002G216500--Sobic004G209500 Sobic006G014700 Sobic006G014700 Sobic002G216500--Sobic006G014700 Sobic002G216500--Sobic003G378301 Sobic002G216500--Sobic003G310500 Sobic002G216500--Sobic004G217700 Sobic004G195800--Sobic002G209100 Sobic004G195800--Sobic002G041800 Sobic004G195800--Sobic005G085500 Sobic009G252100 Sobic009G252100 Sobic004G195800--Sobic009G252100 Sobic010G120800 Sobic010G120800 Sobic004G195800--Sobic010G120800 Sobic004G195800--Sobic004G217700 Sobic004G195800--Sobic001G201800 Sobic004G187300 Sobic004G187300 Sobic004G195800--Sobic004G187300 Sobic005G193600 Sobic005G193600 Sobic004G195800--Sobic005G193600 Sobic002G423600--Sobic001G056400 Sobic002G423600--Sobic005G182701 Sobic002G423600--Sobic001G201800 Sobic002G423600--Sobic001G012000 Sobic004G078600 Sobic004G078600 Sobic002G423600--Sobic004G078600 Sobic002G423600--Sobic004G217700 Sobic002G423600--Sobic007G055600 Sobic002G423600--SobicK044407 Sobic002G423600--Sobic006G045000 Sobic003G310500--Sobic001G056500 Sobic008G038100 Sobic008G038100 Sobic003G310500--Sobic008G038100 Sobic003G310500--Sobic004G209500 Sobic003G310500--Sobic010G214200 Sobic003G310500--Sobic009G216050 Sobic003G310500--Sobic002G216500 Sobic003G310500--Sobic006G045000 Sobic008G181300 Sobic008G181300 Sobic003G310500--Sobic008G181300 Sobic003G310500--Sobic006G014700 SobicK044407--Sobic001G012000 SobicK044407--Sobic001G056400 SobicK044407--Sobic008G181801 SobicK044407--Sobic006G045000 SobicK044407--Sobic003G378301 Sobic003G310200 Sobic003G310200 SobicK044407--Sobic003G310200 SobicK044407--Sobic005G182701 SobicK044407--Sobic002G423600 SobicK044407--Sobic007G055600
Octagon: transcription factors


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