Gene annotation
Transcriptome id Sobic.001G320700.1
Synonym Sb01g031145, ADT3, PD1
Functional annotation prephenate dehydratase domain containing protein, expressed
UniProt A0A1Z5S8L7
Pfam PF00800
Panther DB PTHR21022 PTHR21022:SF2
NCBI CDD KOG2797; Prephenate dehydratase
KEGG Orthology -
Gene Ontology GO:0009094; L-phenylalanine biosynthetic process GO:0004664prephenate dehydratase activity


Orthologs (automatic annotation)
TAIR AT2G27820 : prephenate dehydratase 1
RAP-DB (Rice) LOC_Os10g37980.1 : prephenate dehydratase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a055985 , Zm00025a013501 , Zm00025a053628
Brachypodium KQJ97527 , KQJ91570
Barley HORVU1Hr1G048860.1 , HORVU5Hr1G092190.2 , HORVU5Hr1G092190.1
Wheat TraesCS1B02G195800
Populus -


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cDNA sequences
Sobic.001G320700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G214000 Highly abundant under cold stress(PubMedID : 26645959)@heat shock protein DnaJ, putative, expressed -
2 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
3 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
4 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
5 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase
6 Sobic.010G214200 OsFBK17 - F-box domain and kelch repeat containing protein, expressed -
7 Sobic.006G045000 drought-induced protein 1, putative, expressed -
8 Sobic.003G402200 sensitivity to red light reduced protein 1, putative, expressed -
9 Sobic.003G248901 - -
10 Sobic.008G111300 transporter family protein, putative, expressed -
11 Sobic.001G056500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
12 Sobic.001G315800 shikimate/quinate 5-dehydrogenase, putative, expressed -
13 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.009G233900 dehydrogenase, putative, expressed -
15 Sobic.003G378301 - K17362: acyl-coenzyme A thioesterase 13
16 Sobic.001G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
17 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G427700 anthranilate synthase component I-1, chloroplast precursor, putative, expressed K01657: anthranilate synthase component I
19 Sobic.001G410450 - -
20 Sobic.002G349400 - -


Gene co-expression network
sample Sobic001G320700 Sobic001G320700 Sobic003G214000 Sobic003G214000 Sobic001G320700--Sobic003G214000 Sobic004G217700 Sobic004G217700 Sobic001G320700--Sobic004G217700 Sobic001G201800 Sobic001G201800 Sobic001G320700--Sobic001G201800 Sobic002G423600 Sobic002G423600 Sobic001G320700--Sobic002G423600 Sobic004G078600 Sobic004G078600 Sobic001G320700--Sobic004G078600 Sobic010G214200 Sobic010G214200 Sobic001G320700--Sobic010G214200 Sobic006G045000 Sobic006G045000 Sobic001G320700--Sobic006G045000 Sobic003G402200 Sobic003G402200 Sobic001G320700--Sobic003G402200 Sobic003G248901 Sobic003G248901 Sobic001G320700--Sobic003G248901 Sobic001G179100 Sobic001G179100 Sobic003G214000--Sobic001G179100 Sobic004G068700 Sobic004G068700 Sobic003G214000--Sobic004G068700 Sobic003G214000--Sobic004G078600 Sobic002G155900 Sobic002G155900 Sobic003G214000--Sobic002G155900 Sobic003G214000--Sobic001G320700 Sobic008G137800 Sobic008G137800 Sobic003G214000--Sobic008G137800 Sobic009G075100 Sobic009G075100 Sobic003G214000--Sobic009G075100 Sobic003G214000--Sobic001G201800 Sobic008G111300 Sobic008G111300 Sobic003G214000--Sobic008G111300 Sobic004G217700--Sobic002G423600 Sobic001G056500 Sobic001G056500 Sobic004G217700--Sobic001G056500 Sobic001G056400 Sobic001G056400 Sobic004G217700--Sobic001G056400 Sobic003G378301 Sobic003G378301 Sobic004G217700--Sobic003G378301 Sobic005G182701 Sobic005G182701 Sobic004G217700--Sobic005G182701 SobicK044407 SobicK044407 Sobic004G217700--SobicK044407 Sobic004G217700--Sobic006G045000 Sobic001G410450 Sobic001G410450 Sobic004G217700--Sobic001G410450 Sobic002G041800 Sobic002G041800 Sobic004G217700--Sobic002G041800 Sobic001G201800--Sobic004G078600 Sobic009G115400 Sobic009G115400 Sobic001G201800--Sobic009G115400 Sobic001G201800--Sobic002G423600 Sobic001G012000 Sobic001G012000 Sobic001G201800--Sobic001G012000 Sobic009G252100 Sobic009G252100 Sobic001G201800--Sobic009G252100 Sobic002G202700 Sobic002G202700 Sobic001G201800--Sobic002G202700 Sobic001G201800--Sobic006G045000 Sobic001G201800--Sobic001G056400 Sobic002G108400 Sobic002G108400 Sobic001G201800--Sobic002G108400 Sobic002G423600--Sobic001G056400 Sobic002G423600--Sobic005G182701 Sobic002G423600--Sobic001G201800 Sobic002G423600--Sobic001G012000 Sobic002G423600--Sobic004G078600 Sobic002G423600--Sobic004G217700 Sobic007G055600 Sobic007G055600 Sobic002G423600--Sobic007G055600 Sobic002G423600--SobicK044407 Sobic002G423600--Sobic006G045000 Sobic004G078600--Sobic001G201800 Sobic004G078600--Sobic002G423600 Sobic004G078600--Sobic009G115400 Sobic004G078600--Sobic002G041800 Sobic004G078600--Sobic009G075100 Sobic004G078600--Sobic005G182701 Sobic004G078600--Sobic001G012000 Sobic004G078600--Sobic009G252100 Sobic004G078600--Sobic007G055600 Sobic010G214200--Sobic006G045000 Sobic004G209500 Sobic004G209500 Sobic010G214200--Sobic004G209500 Sobic010G214200--Sobic004G217700 Sobic010G214200--Sobic001G056500 Sobic002G216500 Sobic002G216500 Sobic010G214200--Sobic002G216500 Sobic004G195800 Sobic004G195800 Sobic010G214200--Sobic004G195800 Sobic010G214200--Sobic002G423600 Sobic003G310500 Sobic003G310500 Sobic010G214200--Sobic003G310500 Sobic010G214200--SobicK044407 Sobic006G045000--SobicK044407 Sobic006G045000--Sobic001G012000 Sobic006G045000--Sobic001G056400 Sobic008G181801 Sobic008G181801 Sobic006G045000--Sobic008G181801 Sobic006G045000--Sobic002G423600 Sobic006G045000--Sobic003G378301 Sobic006G045000--Sobic005G182701 Sobic006G045000--Sobic001G201800 Sobic006G045000--Sobic004G217700 Sobic001G145050 Sobic001G145050 Sobic003G402200--Sobic001G145050 Sobic009G205600 Sobic009G205600 Sobic003G402200--Sobic009G205600 Sobic003G402200--Sobic004G078600 Sobic003G151800 Sobic003G151800 Sobic003G402200--Sobic003G151800 Sobic003G402200--Sobic001G320700 Sobic003G402200--Sobic001G201800 Sobic001G427700 Sobic001G427700 Sobic003G402200--Sobic001G427700 Sobic005G089000 Sobic005G089000 Sobic003G402200--Sobic005G089000 Sobic003G402200--Sobic008G111300 Sobic003G248901--Sobic006G045000 Sobic003G248901--Sobic010G214200 Sobic003G248901--SobicK044407 Sobic003G248901--Sobic001G012000 Sobic003G248901--Sobic003G378301 Sobic003G248901--Sobic001G056400 Sobic003G310200 Sobic003G310200 Sobic003G248901--Sobic003G310200 Sobic006G123400 Sobic006G123400 Sobic003G248901--Sobic006G123400 Sobic003G248901--Sobic001G320700
Octagon: transcription factors


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