Gene annotation
Transcriptome id Sobic.009G233900.1
Synonym Sb09g028640
Functional annotation dehydrogenase, putative, expressed
UniProt C5YVL5
Pfam PF03807 PF14833
Panther DB PTHR22981 PTHR22981:SF54
NCBI CDD KOG0409; Predicted dehydrogenase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G29120 : 6-phosphogluconate dehydrogenase family protein
RAP-DB (Rice) LOC_Os05g49070.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a036617
Brachypodium -
Barley HORVU1Hr1G088270.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G056500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
2 Sobic.009G075100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@lachrymatory factor synthase, putative, expressed -
3 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
5 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase
6 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
7 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
8 Sobic.001G449800 OsWAK25 - OsWAK receptor-like protein kinase, expressed -
9 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.006G045000 drought-induced protein 1, putative, expressed -
11 Sobic.008G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.009G153200 U-box domain containing protein, expressed -
13 Sobic.009G115300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.009G014600 Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed -
15 Sobic.005G182701 - -
16 Sobic.008G181300 expressed protein -
17 Sobic.010G225500 - -
18 Sobic.007G055600 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K14174: beta-farnesene/exo-alpha-bergamotene synthase
19 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
20 Sobic.001G320700 prephenate dehydratase domain containing protein, expressed -


Gene co-expression network
sample Sobic009G233900 Sobic009G233900 Sobic001G056500 Sobic001G056500 Sobic009G233900--Sobic001G056500 Sobic009G075100 Sobic009G075100 Sobic009G233900--Sobic009G075100 Sobic004G209500 Sobic004G209500 Sobic009G233900--Sobic004G209500 Sobic002G423600 Sobic002G423600 Sobic009G233900--Sobic002G423600 Sobic004G078600 Sobic004G078600 Sobic009G233900--Sobic004G078600 Sobic004G217700 Sobic004G217700 Sobic009G233900--Sobic004G217700 Sobic001G201800 Sobic001G201800 Sobic009G233900--Sobic001G201800 Sobic001G449800 Sobic001G449800 Sobic009G233900--Sobic001G449800 Sobic009G115400 Sobic009G115400 Sobic009G233900--Sobic009G115400 Sobic009G014600 Sobic009G014600 Sobic001G056500--Sobic009G014600 Sobic005G182701 Sobic005G182701 Sobic001G056500--Sobic005G182701 Sobic007G055600 Sobic007G055600 Sobic001G056500--Sobic007G055600 Sobic001G056400 Sobic001G056400 Sobic001G056500--Sobic001G056400 Sobic001G056500--Sobic004G217700 Sobic007G076000 Sobic007G076000 Sobic001G056500--Sobic007G076000 Sobic001G056500--Sobic002G423600 Sobic006G005500 Sobic006G005500 Sobic001G056500--Sobic006G005500 Sobic001G125700 Sobic001G125700 Sobic001G056500--Sobic001G125700 Sobic009G075100--Sobic004G078600 Sobic009G075100--Sobic009G233900 Sobic009G075100--Sobic001G201800 Sobic009G075100--Sobic009G115400 Sobic004G007500 Sobic004G007500 Sobic009G075100--Sobic004G007500 Sobic003G214000 Sobic003G214000 Sobic009G075100--Sobic003G214000 Sobic009G075100--Sobic002G423600 Sobic001G448800 Sobic001G448800 Sobic009G075100--Sobic001G448800 Sobic009G000900 Sobic009G000900 Sobic009G075100--Sobic009G000900 Sobic009G216050 Sobic009G216050 Sobic004G209500--Sobic009G216050 Sobic006G045000 Sobic006G045000 Sobic004G209500--Sobic006G045000 Sobic010G214200 Sobic010G214200 Sobic004G209500--Sobic010G214200 Sobic003G310500 Sobic003G310500 Sobic004G209500--Sobic003G310500 Sobic005G085500 Sobic005G085500 Sobic004G209500--Sobic005G085500 Sobic004G209500--Sobic009G233900 Sobic002G216500 Sobic002G216500 Sobic004G209500--Sobic002G216500 Sobic002G209100 Sobic002G209100 Sobic004G209500--Sobic002G209100 Sobic004G209500--Sobic004G217700 Sobic002G423600--Sobic001G056400 Sobic002G423600--Sobic005G182701 Sobic002G423600--Sobic001G201800 Sobic001G012000 Sobic001G012000 Sobic002G423600--Sobic001G012000 Sobic002G423600--Sobic004G078600 Sobic002G423600--Sobic004G217700 Sobic002G423600--Sobic007G055600 SobicK044407 SobicK044407 Sobic002G423600--SobicK044407 Sobic002G423600--Sobic006G045000 Sobic004G078600--Sobic001G201800 Sobic004G078600--Sobic002G423600 Sobic004G078600--Sobic009G115400 Sobic002G041800 Sobic002G041800 Sobic004G078600--Sobic002G041800 Sobic004G078600--Sobic009G075100 Sobic004G078600--Sobic005G182701 Sobic004G078600--Sobic001G012000 Sobic009G252100 Sobic009G252100 Sobic004G078600--Sobic009G252100 Sobic004G078600--Sobic007G055600 Sobic004G217700--Sobic002G423600 Sobic004G217700--Sobic001G056500 Sobic004G217700--Sobic001G056400 Sobic003G378301 Sobic003G378301 Sobic004G217700--Sobic003G378301 Sobic004G217700--Sobic005G182701 Sobic004G217700--SobicK044407 Sobic004G217700--Sobic006G045000 Sobic001G410450 Sobic001G410450 Sobic004G217700--Sobic001G410450 Sobic004G217700--Sobic002G041800 Sobic001G201800--Sobic004G078600 Sobic001G201800--Sobic009G115400 Sobic001G201800--Sobic002G423600 Sobic001G201800--Sobic001G012000 Sobic001G201800--Sobic009G252100 Sobic002G202700 Sobic002G202700 Sobic001G201800--Sobic002G202700 Sobic001G201800--Sobic006G045000 Sobic001G201800--Sobic001G056400 Sobic002G108400 Sobic002G108400 Sobic001G201800--Sobic002G108400 Sobic001G449800--Sobic002G041800 Sobic001G449800--Sobic004G217700 Sobic001G449800--Sobic009G233900 Sobic004G195800 Sobic004G195800 Sobic001G449800--Sobic004G195800 Sobic010G225500 Sobic010G225500 Sobic001G449800--Sobic010G225500 Sobic009G038200 Sobic009G038200 Sobic001G449800--Sobic009G038200 Sobic001G432500 Sobic001G432500 Sobic001G449800--Sobic001G432500 Sobic001G449800--Sobic004G078600 Sobic001G449800--Sobic002G423600 Sobic009G115400--Sobic001G125700 Sobic009G115400--Sobic006G005500 Sobic009G115400--Sobic007G076000 Sobic009G115400--Sobic007G055600 Sobic009G115400--Sobic005G182701 Sobic006G005400 Sobic006G005400 Sobic009G115400--Sobic006G005400 Sobic009G115400--Sobic001G201800 Sobic005G219000 Sobic005G219000 Sobic009G115400--Sobic005G219000 Sobic005G219100 Sobic005G219100 Sobic009G115400--Sobic005G219100
Octagon: transcription factors


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