Gene annotation
| Transcriptome id | Sobic.009G075100.1 |
|---|---|
| Synonym | Sb09g006340 |
| Functional annotation | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543) lachrymatory factor synthase, putative, expressed |
| UniProt | C5YUL6 |
| Pfam | PF10604 |
| Panther DB | PTHR33789 PTHR33789:SF5 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT4G32870 : Polyketide cyclase/dehydrase and lipid transport superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os05g11250.1 : lachrymatory factor synthase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a037108 |
| Brachypodium | PNT71643 |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G078600 | lipoxygenase, putative, expressed | K00454: lipoxygenase |
| 2 | Sobic.009G233900 | dehydrogenase, putative, expressed | - |
| 3 | Sobic.001G201800 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed | - |
| 4 | Sobic.009G115400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein | - |
| 5 | Sobic.004G007500 | cytochrome P450, putative, expressed | K10528: hydroperoxide lyase |
| 6 | Sobic.003G214000 | Highly abundant under cold stress(PubMedID : 26645959)@heat shock protein DnaJ, putative, expressed | - |
| 7 | Sobic.002G423600 | "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed | K18819: inositol 3-alpha-galactosyltransferase |
| 8 | Sobic.001G448800 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lecithin cholesterol acyltransferase, putative, expressed | - |
| 9 | Sobic.009G000900 | methyltransferase, putative, expressed | K08241: jasmonate O-methyltransferase |
| 10 | Sobic.001G198700 | invertase/pectin methylesterase inhibitor family protein, putative, expressed | - |
| 11 | Sobic.001G315800 | shikimate/quinate 5-dehydrogenase, putative, expressed | - |
| 12 | Sobic.009G069901 | - | - |
| 13 | Sobic.007G029000 | TKL_IRAK_DUF26-lc.4 - DUF26 kinases have homology to DUF26 containing loci, expressed | - |
| 14 | Sobic.009G197300 | BURP domain containing protein, expressed | - |
| 15 | Sobic.005G089000 | gibberellin receptor GID1L2, putative, expressed | - |
| 16 | Sobic.005G182701 | - | - |
| 17 | Sobic.007G055600 | "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed | K14174: beta-farnesene/exo-alpha-bergamotene synthase |
| 18 | Sobic.007G076000 | Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed | K00083: cinnamyl-alcohol dehydrogenase |
| 19 | Sobic.001G291500 | - | - |
| 20 | Sobic.005G190900 | MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed | K10523: speckle-type POZ protein |
Gene co-expression network
Octagon: transcription factors
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