Gene annotation
Transcriptome id Sobic.001G448800.1
Synonym Sb01g042190
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
lecithin cholesterol acyltransferase, putative, expressed
UniProt C5WRS9
Pfam PF02450
Panther DB PTHR11440 PTHR11440:SF51
NCBI CDD KOG2369; Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase
KEGG Orthology -
Gene Ontology GO:0008374; O-acyltransferase activity GO:0006629lipid metabolic process


Orthologs (automatic annotation)
TAIR AT1G27480 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os03g13030.1 : lecithin cholesterol acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a052988
Brachypodium KQK22767
Barley HORVU4Hr1G066090.1 , HORVU4Hr1G066090.3 , HORVU4Hr1G066090.2
Wheat TraesCS4D02G237700 , TraesCS4B02G236300 , TraesCS4A02G060900
Populus -


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cDNA sequences
Sobic.001G448800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G007500 cytochrome P450, putative, expressed K10528: hydroperoxide lyase
2 Sobic.009G075100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@lachrymatory factor synthase, putative, expressed -
3 Sobic.004G179500 APO, putative, expressed -
4 Sobic.002G174801 - -
5 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase
6 Sobic.003G214000 Highly abundant under cold stress(PubMedID : 26645959)@heat shock protein DnaJ, putative, expressed -
7 Sobic.009G000900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
8 Sobic.009G233900 dehydrogenase, putative, expressed -
9 Sobic.001G320700 prephenate dehydratase domain containing protein, expressed -
10 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
11 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G449800 OsWAK25 - OsWAK receptor-like protein kinase, expressed -
13 Sobic.009G197300 BURP domain containing protein, expressed -
14 Sobic.001G161300 mttA/Hcf106 family protein, putative, expressed K03116: sec-independent protein translocase protein TatA
15 Sobic.007G029000 TKL_IRAK_DUF26-lc.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
16 Sobic.002G202700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed -
17 Sobic.001G179100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed -
18 Sobic.003G255100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.010G182800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase 1, putative, expressed -
20 Sobic.006G007650 - -


Gene co-expression network
sample Sobic001G448800 Sobic001G448800 Sobic004G007500 Sobic004G007500 Sobic001G448800--Sobic004G007500 Sobic009G075100 Sobic009G075100 Sobic001G448800--Sobic009G075100 Sobic004G179500 Sobic004G179500 Sobic001G448800--Sobic004G179500 Sobic002G174801 Sobic002G174801 Sobic001G448800--Sobic002G174801 Sobic004G078600 Sobic004G078600 Sobic001G448800--Sobic004G078600 Sobic003G214000 Sobic003G214000 Sobic001G448800--Sobic003G214000 Sobic009G000900 Sobic009G000900 Sobic001G448800--Sobic009G000900 Sobic009G233900 Sobic009G233900 Sobic001G448800--Sobic009G233900 Sobic001G320700 Sobic001G320700 Sobic001G448800--Sobic001G320700 Sobic004G007500--Sobic009G000900 Sobic007G029000 Sobic007G029000 Sobic004G007500--Sobic007G029000 Sobic001G161300 Sobic001G161300 Sobic004G007500--Sobic001G161300 Sobic004G007500--Sobic009G075100 Sobic004G007500--Sobic001G448800 Sobic009G070800 Sobic009G070800 Sobic004G007500--Sobic009G070800 Sobic001G276100 Sobic001G276100 Sobic004G007500--Sobic001G276100 Sobic001G281800 Sobic001G281800 Sobic004G007500--Sobic001G281800 Sobic003G106500 Sobic003G106500 Sobic004G007500--Sobic003G106500 Sobic009G075100--Sobic004G078600 Sobic009G075100--Sobic009G233900 Sobic001G201800 Sobic001G201800 Sobic009G075100--Sobic001G201800 Sobic009G115400 Sobic009G115400 Sobic009G075100--Sobic009G115400 Sobic009G075100--Sobic004G007500 Sobic009G075100--Sobic003G214000 Sobic002G423600 Sobic002G423600 Sobic009G075100--Sobic002G423600 Sobic009G075100--Sobic001G448800 Sobic009G075100--Sobic009G000900 Sobic004G179500--Sobic001G448800 Sobic006G007450 Sobic006G007450 Sobic004G179500--Sobic006G007450 Sobic003G255100 Sobic003G255100 Sobic004G179500--Sobic003G255100 Sobic010G182800 Sobic010G182800 Sobic004G179500--Sobic010G182800 Sobic001G198700 Sobic001G198700 Sobic004G179500--Sobic001G198700 Sobic003G401500 Sobic003G401500 Sobic004G179500--Sobic003G401500 Sobic001G452700 Sobic001G452700 Sobic004G179500--Sobic001G452700 Sobic002G064200 Sobic002G064200 Sobic004G179500--Sobic002G064200 Sobic008G095100 Sobic008G095100 Sobic004G179500--Sobic008G095100 Sobic002G174801--Sobic001G448800 Sobic009G115300 Sobic009G115300 Sobic002G174801--Sobic009G115300 Sobic002G174801--Sobic004G078600 Sobic003G310200 Sobic003G310200 Sobic002G174801--Sobic003G310200 Sobic001G012000 Sobic001G012000 Sobic002G174801--Sobic001G012000 Sobic002G174801--Sobic009G115400 Sobic002G202700 Sobic002G202700 Sobic002G174801--Sobic002G202700 Sobic003G378301 Sobic003G378301 Sobic002G174801--Sobic003G378301 Sobic006G007650 Sobic006G007650 Sobic002G174801--Sobic006G007650 Sobic004G078600--Sobic001G201800 Sobic004G078600--Sobic002G423600 Sobic004G078600--Sobic009G115400 Sobic002G041800 Sobic002G041800 Sobic004G078600--Sobic002G041800 Sobic004G078600--Sobic009G075100 Sobic005G182701 Sobic005G182701 Sobic004G078600--Sobic005G182701 Sobic004G078600--Sobic001G012000 Sobic009G252100 Sobic009G252100 Sobic004G078600--Sobic009G252100 Sobic007G055600 Sobic007G055600 Sobic004G078600--Sobic007G055600 Sobic001G179100 Sobic001G179100 Sobic003G214000--Sobic001G179100 Sobic004G068700 Sobic004G068700 Sobic003G214000--Sobic004G068700 Sobic003G214000--Sobic004G078600 Sobic002G155900 Sobic002G155900 Sobic003G214000--Sobic002G155900 Sobic003G214000--Sobic001G320700 Sobic008G137800 Sobic008G137800 Sobic003G214000--Sobic008G137800 Sobic003G214000--Sobic009G075100 Sobic003G214000--Sobic001G201800 Sobic008G111300 Sobic008G111300 Sobic003G214000--Sobic008G111300 Sobic009G000900--Sobic004G007500 Sobic009G000900--Sobic009G070800 Sobic009G009500 Sobic009G009500 Sobic009G000900--Sobic009G009500 Sobic009G000900--Sobic001G161300 Sobic009G000900--Sobic007G029000 Sobic009G000900--Sobic001G276100 Sobic009G000900--Sobic009G075100 Sobic009G197300 Sobic009G197300 Sobic009G000900--Sobic009G197300 Sobic004G343100 Sobic004G343100 Sobic009G000900--Sobic004G343100 Sobic001G056500 Sobic001G056500 Sobic009G233900--Sobic001G056500 Sobic009G233900--Sobic009G075100 Sobic004G209500 Sobic004G209500 Sobic009G233900--Sobic004G209500 Sobic009G233900--Sobic002G423600 Sobic009G233900--Sobic004G078600 Sobic004G217700 Sobic004G217700 Sobic009G233900--Sobic004G217700 Sobic009G233900--Sobic001G201800 Sobic001G449800 Sobic001G449800 Sobic009G233900--Sobic001G449800 Sobic009G233900--Sobic009G115400 Sobic001G320700--Sobic003G214000 Sobic001G320700--Sobic004G217700 Sobic001G320700--Sobic001G201800 Sobic001G320700--Sobic002G423600 Sobic001G320700--Sobic004G078600 Sobic010G214200 Sobic010G214200 Sobic001G320700--Sobic010G214200 Sobic006G045000 Sobic006G045000 Sobic001G320700--Sobic006G045000 Sobic003G402200 Sobic003G402200 Sobic001G320700--Sobic003G402200 Sobic003G248901 Sobic003G248901 Sobic001G320700--Sobic003G248901
Octagon: transcription factors


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