Gene annotation
Transcriptome id Sobic.009G197300.1
Synonym RD22, ATRD22
Functional annotation BURP domain containing protein, expressed
UniProt A0A1B6P9K1
Pfam PF03181
Panther DB PTHR31236 PTHR31236:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G25610 : BURP domain-containing protein
RAP-DB (Rice) LOC_Os06g17000.1 : BURP domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G197300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G007600 polyphenol oxidase, putative, expressed -
2 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
3 Sobic.009G075100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@lachrymatory factor synthase, putative, expressed -
4 Sobic.009G000900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
5 Sobic.004G007500 cytochrome P450, putative, expressed K10528: hydroperoxide lyase
6 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase
7 Sobic.009G070800 HAD superfamily phosphatase, putative, expressed -
8 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G108400 cytochrome P450, putative, expressed -
10 Sobic.003G355800 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
11 Sobic.007G029000 TKL_IRAK_DUF26-lc.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
12 Sobic.003G214000 Highly abundant under cold stress(PubMedID : 26645959)@heat shock protein DnaJ, putative, expressed -
13 Sobic.007G168000 chlorophyllase-2, chloroplast precursor, putative, expressed K08099: chlorophyllase
14 Sobic.001G276100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
15 Sobic.009G009500 response to wounding - serine-type endopeptidase inhibitor activity(PubMedID : 24655390)@response to wounding - serine- type endopeptidase inhibitor activity(PubMedID : 24655390)@inhibitor I family protein, putative, expressed -
16 Sobic.004G019400 Protein terpene synthase 14 (At)(PubMedID : 27208977)@"Protein terpene synthase 14, S-linalool synthase (Os)"(PubMedID : 27208977)@terpene synthase, putative, expressed -
17 Sobic.001G320700 prephenate dehydratase domain containing protein, expressed -
18 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
19 Sobic.001G315800 shikimate/quinate 5-dehydrogenase, putative, expressed -
20 Sobic.001G291500 - -


Gene co-expression network
sample Sobic009G197300 Sobic009G197300 Sobic006G007600 Sobic006G007600 Sobic009G197300--Sobic006G007600 Sobic001G201800 Sobic001G201800 Sobic009G197300--Sobic001G201800 Sobic009G075100 Sobic009G075100 Sobic009G197300--Sobic009G075100 Sobic009G000900 Sobic009G000900 Sobic009G197300--Sobic009G000900 Sobic004G007500 Sobic004G007500 Sobic009G197300--Sobic004G007500 Sobic004G078600 Sobic004G078600 Sobic009G197300--Sobic004G078600 Sobic009G070800 Sobic009G070800 Sobic009G197300--Sobic009G070800 Sobic009G115400 Sobic009G115400 Sobic009G197300--Sobic009G115400 Sobic002G108400 Sobic002G108400 Sobic009G197300--Sobic002G108400 Sobic006G007100 Sobic006G007100 Sobic006G007600--Sobic006G007100 Sobic006G005400 Sobic006G005400 Sobic006G007600--Sobic006G005400 Sobic005G219100 Sobic005G219100 Sobic006G007600--Sobic005G219100 Sobic001G125700 Sobic001G125700 Sobic006G007600--Sobic001G125700 Sobic005G219000 Sobic005G219000 Sobic006G007600--Sobic005G219000 Sobic006G005500 Sobic006G005500 Sobic006G007600--Sobic006G005500 Sobic006G007600--Sobic009G115400 Sobic001G291500 Sobic001G291500 Sobic006G007600--Sobic001G291500 Sobic005G186500 Sobic005G186500 Sobic006G007600--Sobic005G186500 Sobic001G201800--Sobic004G078600 Sobic001G201800--Sobic009G115400 Sobic002G423600 Sobic002G423600 Sobic001G201800--Sobic002G423600 Sobic001G012000 Sobic001G012000 Sobic001G201800--Sobic001G012000 Sobic009G252100 Sobic009G252100 Sobic001G201800--Sobic009G252100 Sobic002G202700 Sobic002G202700 Sobic001G201800--Sobic002G202700 Sobic006G045000 Sobic006G045000 Sobic001G201800--Sobic006G045000 Sobic001G056400 Sobic001G056400 Sobic001G201800--Sobic001G056400 Sobic001G201800--Sobic002G108400 Sobic009G075100--Sobic004G078600 Sobic009G233900 Sobic009G233900 Sobic009G075100--Sobic009G233900 Sobic009G075100--Sobic001G201800 Sobic009G075100--Sobic009G115400 Sobic009G075100--Sobic004G007500 Sobic003G214000 Sobic003G214000 Sobic009G075100--Sobic003G214000 Sobic009G075100--Sobic002G423600 Sobic001G448800 Sobic001G448800 Sobic009G075100--Sobic001G448800 Sobic009G075100--Sobic009G000900 Sobic009G000900--Sobic004G007500 Sobic009G000900--Sobic009G070800 Sobic009G009500 Sobic009G009500 Sobic009G000900--Sobic009G009500 Sobic001G161300 Sobic001G161300 Sobic009G000900--Sobic001G161300 Sobic007G029000 Sobic007G029000 Sobic009G000900--Sobic007G029000 Sobic001G276100 Sobic001G276100 Sobic009G000900--Sobic001G276100 Sobic009G000900--Sobic009G075100 Sobic009G000900--Sobic009G197300 Sobic004G343100 Sobic004G343100 Sobic009G000900--Sobic004G343100 Sobic004G007500--Sobic009G000900 Sobic004G007500--Sobic007G029000 Sobic004G007500--Sobic001G161300 Sobic004G007500--Sobic009G075100 Sobic004G007500--Sobic001G448800 Sobic004G007500--Sobic009G070800 Sobic004G007500--Sobic001G276100 Sobic001G281800 Sobic001G281800 Sobic004G007500--Sobic001G281800 Sobic003G106500 Sobic003G106500 Sobic004G007500--Sobic003G106500 Sobic004G078600--Sobic001G201800 Sobic004G078600--Sobic002G423600 Sobic004G078600--Sobic009G115400 Sobic002G041800 Sobic002G041800 Sobic004G078600--Sobic002G041800 Sobic004G078600--Sobic009G075100 Sobic005G182701 Sobic005G182701 Sobic004G078600--Sobic005G182701 Sobic004G078600--Sobic001G012000 Sobic004G078600--Sobic009G252100 Sobic007G055600 Sobic007G055600 Sobic004G078600--Sobic007G055600 Sobic009G070800--Sobic009G009500 Sobic009G070800--Sobic009G000900 Sobic009G070800--Sobic007G029000 Sobic009G070800--Sobic004G007500 Sobic001G315200 Sobic001G315200 Sobic009G070800--Sobic001G315200 Sobic009G070800--Sobic009G197300 Sobic007G168000 Sobic007G168000 Sobic009G070800--Sobic007G168000 Sobic009G070800--Sobic009G075100 Sobic008G049200 Sobic008G049200 Sobic009G070800--Sobic008G049200 Sobic009G115400--Sobic001G125700 Sobic009G115400--Sobic006G005500 Sobic007G076000 Sobic007G076000 Sobic009G115400--Sobic007G076000 Sobic009G115400--Sobic007G055600 Sobic009G115400--Sobic005G182701 Sobic009G115400--Sobic006G005400 Sobic009G115400--Sobic001G201800 Sobic009G115400--Sobic005G219000 Sobic009G115400--Sobic005G219100 Sobic002G108400--Sobic002G202700 Sobic002G108400--Sobic009G115400 Sobic002G108400--Sobic006G005400 Sobic002G108400--Sobic001G201800 Sobic002G108400--Sobic006G007100 Sobic010G225500 Sobic010G225500 Sobic002G108400--Sobic010G225500 Sobic002G108400--Sobic006G007600 Sobic002G108400--Sobic005G186500 Sobic002G108400--Sobic006G005500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.