Gene annotation
Transcriptome id Sobic.007G168000.2,Sobic.007G168000.1
Synonym ATHCOR1, CORI1, ATCLH1, Sb07g024090, CLH1
Functional annotation chlorophyllase-2, chloroplast precursor, putative, expressed
UniProt C5YN66 , A0A1Z5RAD4
Pfam PF12695
Panther DB PTHR33428 PTHR33428:SF3
NCBI CDD -
KEGG Orthology K08099; chlorophyllase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19670 : chlorophyllase 1
RAP-DB (Rice) LOC_Os10g28370.1 : chlorophyllase-2, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a005596
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G143801 - -
2 Sobic.006G007300 - -
3 Sobic.008G077800 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.006G007600 polyphenol oxidase, putative, expressed -
5 Sobic.002G093600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Jacalin-like lectin domain containing protein, putative, expressed -
6 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
7 Sobic.002G391700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed K00430: peroxidase
8 Sobic.002G087500 - -
9 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
10 Sobic.008G028566 - -
11 Sobic.008G028600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY112, expressed -
12 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
13 Sobic.005G219000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@patatin, putative, expressed -
14 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
15 Sobic.005G219100 patatin, putative, expressed -
16 Sobic.006G007650 - -
17 Sobic.008G145200 aspartic proteinase nepenthesin precursor, putative, expressed -
18 Sobic.009G009500 response to wounding - serine-type endopeptidase inhibitor activity(PubMedID : 24655390)@response to wounding - serine- type endopeptidase inhibitor activity(PubMedID : 24655390)@inhibitor I family protein, putative, expressed -
19 Sobic.006G007100 cysteine proteinase At4g11310 precursor, putative, expressed -
20 Sobic.009G069901 - -


Gene co-expression network
sample Sobic007G168000 Sobic007G168000 Sobic004G143801 Sobic004G143801 Sobic007G168000--Sobic004G143801 Sobic006G007300 Sobic006G007300 Sobic007G168000--Sobic006G007300 Sobic008G077800 Sobic008G077800 Sobic007G168000--Sobic008G077800 Sobic006G007600 Sobic006G007600 Sobic007G168000--Sobic006G007600 Sobic002G093600 Sobic002G093600 Sobic007G168000--Sobic002G093600 Sobic002G298400 Sobic002G298400 Sobic007G168000--Sobic002G298400 Sobic002G391700 Sobic002G391700 Sobic007G168000--Sobic002G391700 Sobic002G087500 Sobic002G087500 Sobic007G168000--Sobic002G087500 Sobic002G040400 Sobic002G040400 Sobic007G168000--Sobic002G040400 Sobic004G143801--Sobic002G298400 Sobic004G143801--Sobic002G087500 Sobic004G143801--Sobic002G040400 Sobic004G143801--Sobic002G391700 Sobic004G143801--Sobic002G093600 Sobic004G143801--Sobic008G077800 Sobic008G028600 Sobic008G028600 Sobic004G143801--Sobic008G028600 Sobic004G143801--Sobic006G007300 Sobic008G028566 Sobic008G028566 Sobic004G143801--Sobic008G028566 Sobic006G007300--Sobic008G077800 Sobic006G007300--Sobic008G028566 Sobic006G007300--Sobic002G093600 Sobic006G007300--Sobic002G391700 Sobic008G145200 Sobic008G145200 Sobic006G007300--Sobic008G145200 Sobic006G007300--Sobic008G028600 Sobic005G219000 Sobic005G219000 Sobic006G007300--Sobic005G219000 Sobic006G007300--Sobic002G087500 Sobic006G007300--Sobic002G298400 Sobic008G077800--Sobic006G007300 Sobic008G077800--Sobic002G391700 Sobic008G077800--Sobic008G028566 Sobic008G077800--Sobic002G093600 Sobic008G077800--Sobic008G028600 Sobic008G077800--Sobic002G087500 Sobic008G077800--Sobic005G219000 Sobic008G077800--Sobic002G040400 Sobic008G077800--Sobic002G298400 Sobic006G007100 Sobic006G007100 Sobic006G007600--Sobic006G007100 Sobic006G005400 Sobic006G005400 Sobic006G007600--Sobic006G005400 Sobic005G219100 Sobic005G219100 Sobic006G007600--Sobic005G219100 Sobic001G125700 Sobic001G125700 Sobic006G007600--Sobic001G125700 Sobic006G007600--Sobic005G219000 Sobic006G005500 Sobic006G005500 Sobic006G007600--Sobic006G005500 Sobic009G115400 Sobic009G115400 Sobic006G007600--Sobic009G115400 Sobic001G291500 Sobic001G291500 Sobic006G007600--Sobic001G291500 Sobic005G186500 Sobic005G186500 Sobic006G007600--Sobic005G186500 Sobic002G093600--Sobic002G391700 Sobic002G093600--Sobic008G077800 Sobic002G093600--Sobic002G298400 Sobic002G093600--Sobic002G087500 Sobic002G093600--Sobic006G007300 Sobic002G093600--Sobic008G028566 Sobic002G093600--Sobic002G040400 Sobic002G093600--Sobic008G028600 Sobic002G093600--Sobic004G143801 Sobic002G298400--Sobic002G040400 Sobic002G298400--Sobic002G087500 Sobic002G298400--Sobic002G391700 Sobic002G298400--Sobic008G028600 Sobic002G298400--Sobic002G093600 Sobic002G298400--Sobic008G077800 Sobic002G298400--Sobic004G143801 Sobic002G298400--Sobic008G028566 Sobic002G298400--Sobic005G219000 Sobic002G391700--Sobic002G093600 Sobic002G391700--Sobic002G087500 Sobic002G391700--Sobic002G298400 Sobic002G391700--Sobic002G040400 Sobic002G391700--Sobic008G077800 Sobic002G391700--Sobic008G028600 Sobic002G391700--Sobic006G007300 Sobic002G391700--Sobic008G028566 Sobic002G391700--Sobic005G219000 Sobic002G087500--Sobic002G040400 Sobic002G087500--Sobic002G298400 Sobic002G087500--Sobic008G028600 Sobic002G087500--Sobic002G391700 Sobic002G087500--Sobic002G093600 Sobic002G087500--Sobic008G077800 Sobic002G087500--Sobic005G219000 Sobic002G087500--Sobic006G005500 Sobic002G087500--Sobic001G125700 Sobic002G040400--Sobic008G028600 Sobic002G040400--Sobic002G087500 Sobic002G040400--Sobic002G298400 Sobic002G040400--Sobic002G391700 Sobic002G040400--Sobic006G005500 Sobic002G040400--Sobic005G219000 Sobic002G040400--Sobic001G125700 Sobic002G040400--Sobic008G077800 Sobic007G076000 Sobic007G076000 Sobic002G040400--Sobic007G076000
Octagon: transcription factors


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