Gene annotation
Transcriptome id Sobic.009G070800.4,Sobic.009G070800.3,Sobic.009G070800.2,Sobic.009G070800.1
Synonym VSP2, ATVSP2, Sb09g005970
Functional annotation HAD superfamily phosphatase, putative, expressed
UniProt A0A1B6P7A4 , A0A1Z5R2I9 , A0A1B6P780 , A0A1B6P764
Pfam PF03767
Panther DB PTHR31284 PTHR31284:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003993; acid phosphatase activity


Orthologs (automatic annotation)
TAIR AT4G29260 : HAD superfamily, subfamily IIIB acid phosphatase
RAP-DB (Rice) LOC_Os05g10210.1,LOC_Os05g10310.2 : HAD superfamily phosphatase, putative, expressed,acid phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a043079 , Zm00025a043080
Brachypodium KQK07139
Barley HORVU7Hr1G010690.11 , HORVU7Hr1G010690.10 , HORVU7Hr1G010690.13 , HORVU7Hr1G010690.12 , HORVU7Hr1G010690.9 , HORVU7Hr1G010690.8 , HORVU7Hr1G010690.5 , HORVU7Hr1G010690.4 , HORVU7Hr1G010690.7 , HORVU7Hr1G010690.6 , HORVU7Hr1G010690.1 , HORVU7Hr1G010690.3 , HORVU7Hr1G010690.2 , HORVU7Hr1G010680.4 , HORVU7Hr1G010680.2 , HORVU7Hr1G010680.3 , HORVU7Hr1G010680.1
Wheat TraesCS4B02G363900 , TraesCS4A02G431300 , TraesCS4B02G364000 , TraesCS4B02G363800 , TraesCS4A02G431200 , TraesCS5A02G532300 , TraesCS5A02G532200 , TraesCS7D02G053700 , TraesCS4D02G357200 , TraesCS4D02G357300 , TraesCS7A02G040400 , TraesCSU02G209300 , TraesCS5A02G532400 , TraesCS4D02G357400 , TraesCS4B02G364100
Populus -


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cDNA sequences
Sobic.009G070800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G009500 response to wounding - serine-type endopeptidase inhibitor activity(PubMedID : 24655390)@response to wounding - serine- type endopeptidase inhibitor activity(PubMedID : 24655390)@inhibitor I family protein, putative, expressed -
2 Sobic.009G000900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
3 Sobic.007G029000 TKL_IRAK_DUF26-lc.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.004G007500 cytochrome P450, putative, expressed K10528: hydroperoxide lyase
5 Sobic.001G315200 expressed protein -
6 Sobic.009G197300 BURP domain containing protein, expressed -
7 Sobic.007G168000 chlorophyllase-2, chloroplast precursor, putative, expressed K08099: chlorophyllase
8 Sobic.009G075100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@lachrymatory factor synthase, putative, expressed -
9 Sobic.008G049200 abscisic stress-ripening, putative, expressed -
10 Sobic.004G151600 fruit protein PKIWI502, putative, expressed -
11 Sobic.002G107000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed -
12 Sobic.003G355800 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
13 Sobic.001G161300 mttA/Hcf106 family protein, putative, expressed K03116: sec-independent protein translocase protein TatA
14 Sobic.003G106500 expressed protein -
15 Sobic.006G103900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@wound/stress protein, putative, expressed -
16 Sobic.001G276100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
17 Sobic.009G069901 - -
18 Sobic.005G099500 nucleoside-triphosphatase, putative, expressed K14641: apyrase
19 Sobic.006G007600 polyphenol oxidase, putative, expressed -
20 Sobic.009G136300 alpha/beta hydrolase fold, putative, expressed -


Gene co-expression network
sample Sobic009G070800 Sobic009G070800 Sobic009G009500 Sobic009G009500 Sobic009G070800--Sobic009G009500 Sobic009G000900 Sobic009G000900 Sobic009G070800--Sobic009G000900 Sobic007G029000 Sobic007G029000 Sobic009G070800--Sobic007G029000 Sobic004G007500 Sobic004G007500 Sobic009G070800--Sobic004G007500 Sobic001G315200 Sobic001G315200 Sobic009G070800--Sobic001G315200 Sobic009G197300 Sobic009G197300 Sobic009G070800--Sobic009G197300 Sobic007G168000 Sobic007G168000 Sobic009G070800--Sobic007G168000 Sobic009G075100 Sobic009G075100 Sobic009G070800--Sobic009G075100 Sobic008G049200 Sobic008G049200 Sobic009G070800--Sobic008G049200 Sobic009G009500--Sobic009G070800 Sobic009G009500--Sobic009G000900 Sobic006G103900 Sobic006G103900 Sobic009G009500--Sobic006G103900 Sobic009G009500--Sobic007G168000 Sobic003G355800 Sobic003G355800 Sobic009G009500--Sobic003G355800 Sobic009G009500--Sobic008G049200 Sobic009G009500--Sobic001G315200 Sobic002G107000 Sobic002G107000 Sobic009G009500--Sobic002G107000 Sobic009G009500--Sobic009G197300 Sobic009G000900--Sobic004G007500 Sobic009G000900--Sobic009G070800 Sobic009G000900--Sobic009G009500 Sobic001G161300 Sobic001G161300 Sobic009G000900--Sobic001G161300 Sobic009G000900--Sobic007G029000 Sobic001G276100 Sobic001G276100 Sobic009G000900--Sobic001G276100 Sobic009G000900--Sobic009G075100 Sobic009G000900--Sobic009G197300 Sobic004G343100 Sobic004G343100 Sobic009G000900--Sobic004G343100 Sobic007G029000--Sobic004G007500 Sobic007G029000--Sobic009G070800 Sobic009G136300 Sobic009G136300 Sobic007G029000--Sobic009G136300 Sobic007G029000--Sobic009G000900 Sobic007G029000--Sobic001G161300 Sobic007G029000--Sobic009G075100 Sobic003G106500 Sobic003G106500 Sobic007G029000--Sobic003G106500 Sobic007G029000--Sobic009G197300 Sobic001G198700 Sobic001G198700 Sobic007G029000--Sobic001G198700 Sobic004G007500--Sobic009G000900 Sobic004G007500--Sobic007G029000 Sobic004G007500--Sobic001G161300 Sobic004G007500--Sobic009G075100 Sobic001G448800 Sobic001G448800 Sobic004G007500--Sobic001G448800 Sobic004G007500--Sobic009G070800 Sobic004G007500--Sobic001G276100 Sobic001G281800 Sobic001G281800 Sobic004G007500--Sobic001G281800 Sobic004G007500--Sobic003G106500 Sobic001G472000 Sobic001G472000 Sobic001G315200--Sobic001G472000 Sobic001G315200--Sobic009G070800 Sobic009G161100 Sobic009G161100 Sobic001G315200--Sobic009G161100 Sobic001G315200--Sobic009G009500 Sobic008G189500 Sobic008G189500 Sobic001G315200--Sobic008G189500 Sobic001G315200--Sobic002G107000 Sobic001G315200--Sobic009G000900 Sobic003G007800 Sobic003G007800 Sobic001G315200--Sobic003G007800 Sobic001G315200--Sobic004G007500 Sobic006G007600 Sobic006G007600 Sobic009G197300--Sobic006G007600 Sobic001G201800 Sobic001G201800 Sobic009G197300--Sobic001G201800 Sobic009G197300--Sobic009G075100 Sobic009G197300--Sobic009G000900 Sobic009G197300--Sobic004G007500 Sobic004G078600 Sobic004G078600 Sobic009G197300--Sobic004G078600 Sobic009G197300--Sobic009G070800 Sobic009G115400 Sobic009G115400 Sobic009G197300--Sobic009G115400 Sobic002G108400 Sobic002G108400 Sobic009G197300--Sobic002G108400 Sobic004G143801 Sobic004G143801 Sobic007G168000--Sobic004G143801 Sobic006G007300 Sobic006G007300 Sobic007G168000--Sobic006G007300 Sobic008G077800 Sobic008G077800 Sobic007G168000--Sobic008G077800 Sobic007G168000--Sobic006G007600 Sobic002G093600 Sobic002G093600 Sobic007G168000--Sobic002G093600 Sobic002G298400 Sobic002G298400 Sobic007G168000--Sobic002G298400 Sobic002G391700 Sobic002G391700 Sobic007G168000--Sobic002G391700 Sobic002G087500 Sobic002G087500 Sobic007G168000--Sobic002G087500 Sobic002G040400 Sobic002G040400 Sobic007G168000--Sobic002G040400 Sobic009G075100--Sobic004G078600 Sobic009G233900 Sobic009G233900 Sobic009G075100--Sobic009G233900 Sobic009G075100--Sobic001G201800 Sobic009G075100--Sobic009G115400 Sobic009G075100--Sobic004G007500 Sobic003G214000 Sobic003G214000 Sobic009G075100--Sobic003G214000 Sobic002G423600 Sobic002G423600 Sobic009G075100--Sobic002G423600 Sobic009G075100--Sobic001G448800 Sobic009G075100--Sobic009G000900 Sobic008G049200--Sobic006G103900 Sobic006G078500 Sobic006G078500 Sobic008G049200--Sobic006G078500 Sobic008G049200--Sobic009G009500 Sobic008G049200--Sobic007G168000 Sobic008G049200--Sobic009G070800 Sobic008G049200--Sobic004G143801 Sobic008G049200--Sobic009G000900 Sobic001G320700 Sobic001G320700 Sobic008G049200--Sobic001G320700 Sobic008G049200--Sobic003G355800
Octagon: transcription factors


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