Gene annotation
| Transcriptome id | Sobic.003G106500.1 |
|---|---|
| Synonym | Sb03g008950, NRP1, ATNRP1 |
| Functional annotation | expressed protein |
| UniProt | C5XF29 |
| Pfam | - |
| Panther DB | PTHR35098 PTHR35098:SF2 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT1G13930 : - |
|---|---|
| RAP-DB (Rice) | LOC_Os10g18340.1 : expressed protein |
| MaizeGDB (Corn) | Zm00025a035393 |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
| Sobic.003G106500 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G198700 | invertase/pectin methylesterase inhibitor family protein, putative, expressed | - |
| 2 | Sobic.008G073400 | B-box (BBX) protein(PubMedID : 30626335)@down-regulated TF in developmental senescence(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed | - |
| 3 | Sobic.002G001800 | potassium transporter, putative, expressed | K03549: KUP system potassium uptake protein |
| 4 | Sobic.002G371900 | DC1 domain-containing protein, putative, expressed | - |
| 5 | Sobic.001G019300 | WD40-like Beta Propeller Repeat family protein, expressed | - |
| 6 | Sobic.005G190900 | MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed | K10523: speckle-type POZ protein |
| 7 | Sobic.002G281000 | aquaporin protein, putative, expressed | K09872: aquaporin PIP |
| 8 | Sobic.005G192600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed | - |
| 9 | Sobic.002G195700 | Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed | K00083: cinnamyl-alcohol dehydrogenase |
| 10 | Sobic.008G063100 | thioredoxin, putative, expressed | K03671: thioredoxin 1 |
| 11 | Sobic.007G178500 | cytochrome P450, putative, expressed | - |
| 12 | Sobic.004G007500 | cytochrome P450, putative, expressed | K10528: hydroperoxide lyase |
| 13 | Sobic.005G089000 | gibberellin receptor GID1L2, putative, expressed | - |
| 14 | Sobic.005G021600 | expressed protein | - |
| 15 | Sobic.001G498300 | galactose mutarotase-like, putative, expressed | - |
| 16 | Sobic.007G029000 | TKL_IRAK_DUF26-lc.4 - DUF26 kinases have homology to DUF26 containing loci, expressed | - |
| 17 | Sobic.010G218600 | inactive receptor kinase At2g26730 precursor, putative, expressed | - |
| 18 | Sobic.002G265400 | UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed | K13691: pathogen-inducible salicylic acid glucosyltransferase |
| 19 | Sobic.004G343100 | YCF37, putative, expressed | - |
| 20 | Sobic.009G202400 | expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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