Gene annotation
Transcriptome id Sobic.005G190900.1
Synonym BPM1, ATBPM1, Sb05g024750
Functional annotation MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt Q8LJW7 , A0A1B6PTG4
Pfam PF00651
Panther DB PTHR26379 PTHR26379:SF168
NCBI CDD -
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G19000 : BTB-POZ and MATH domain 1
RAP-DB (Rice) LOC_Os11g40680.1 : MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
2 Sobic.001G291500 - -
3 Sobic.002G265400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
4 Sobic.001G432500 expressed protein -
5 Sobic.003G106500 expressed protein -
6 Sobic.005G063900 expressed protein -
7 Sobic.003G135800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
8 Sobic.010G225500 - -
9 Sobic.002G371900 DC1 domain-containing protein, putative, expressed -
10 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase
11 Sobic.009G038200 expressed protein -
12 Sobic.001G198700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
13 Sobic.005G089000 gibberellin receptor GID1L2, putative, expressed -
14 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
15 Sobic.006G007300 - -
16 Sobic.009G075100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@lachrymatory factor synthase, putative, expressed -
17 Sobic.004G143801 - -
18 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
19 Sobic.008G073400 B-box (BBX) protein(PubMedID : 30626335)@down-regulated TF in developmental senescence(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
20 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase


Gene co-expression network
sample Sobic005G190900 Sobic005G190900 Sobic001G019300 Sobic001G019300 Sobic005G190900--Sobic001G019300 Sobic001G291500 Sobic001G291500 Sobic005G190900--Sobic001G291500 Sobic002G265400 Sobic002G265400 Sobic005G190900--Sobic002G265400 Sobic001G432500 Sobic001G432500 Sobic005G190900--Sobic001G432500 Sobic003G106500 Sobic003G106500 Sobic005G190900--Sobic003G106500 Sobic005G063900 Sobic005G063900 Sobic005G190900--Sobic005G063900 Sobic003G135800 Sobic003G135800 Sobic005G190900--Sobic003G135800 Sobic010G225500 Sobic010G225500 Sobic005G190900--Sobic010G225500 Sobic002G371900 Sobic002G371900 Sobic005G190900--Sobic002G371900 Sobic001G019300--Sobic002G265400 Sobic002G281000 Sobic002G281000 Sobic001G019300--Sobic002G281000 Sobic001G019300--Sobic005G063900 Sobic001G321600 Sobic001G321600 Sobic001G019300--Sobic001G321600 Sobic001G005500 Sobic001G005500 Sobic001G019300--Sobic001G005500 Sobic008G073400 Sobic008G073400 Sobic001G019300--Sobic008G073400 Sobic002G195700 Sobic002G195700 Sobic001G019300--Sobic002G195700 Sobic001G019300--Sobic005G190900 Sobic001G198700 Sobic001G198700 Sobic001G019300--Sobic001G198700 Sobic006G007100 Sobic006G007100 Sobic001G291500--Sobic006G007100 Sobic005G219100 Sobic005G219100 Sobic001G291500--Sobic005G219100 Sobic005G219000 Sobic005G219000 Sobic001G291500--Sobic005G219000 Sobic006G005400 Sobic006G005400 Sobic001G291500--Sobic006G005400 Sobic001G125700 Sobic001G125700 Sobic001G291500--Sobic001G125700 Sobic006G005500 Sobic006G005500 Sobic001G291500--Sobic006G005500 Sobic006G007300 Sobic006G007300 Sobic001G291500--Sobic006G007300 Sobic001G291500--Sobic001G432500 Sobic008G077800 Sobic008G077800 Sobic001G291500--Sobic008G077800 Sobic002G265400--Sobic001G019300 Sobic004G063200 Sobic004G063200 Sobic002G265400--Sobic004G063200 Sobic002G265400--Sobic005G063900 Sobic002G265400--Sobic002G281000 Sobic002G265400--Sobic001G198700 Sobic002G265400--Sobic005G190900 Sobic009G202400 Sobic009G202400 Sobic002G265400--Sobic009G202400 Sobic002G265400--Sobic002G371900 Sobic009G252100 Sobic009G252100 Sobic002G265400--Sobic009G252100 Sobic008G028600 Sobic008G028600 Sobic001G432500--Sobic008G028600 Sobic002G040400 Sobic002G040400 Sobic001G432500--Sobic002G040400 Sobic002G298400 Sobic002G298400 Sobic001G432500--Sobic002G298400 Sobic002G087500 Sobic002G087500 Sobic001G432500--Sobic002G087500 Sobic001G432500--Sobic005G219000 Sobic001G432500--Sobic006G005500 Sobic002G391700 Sobic002G391700 Sobic001G432500--Sobic002G391700 Sobic001G432500--Sobic001G125700 Sobic007G076000 Sobic007G076000 Sobic001G432500--Sobic007G076000 Sobic003G106500--Sobic001G198700 Sobic003G106500--Sobic008G073400 Sobic002G001800 Sobic002G001800 Sobic003G106500--Sobic002G001800 Sobic003G106500--Sobic002G371900 Sobic003G106500--Sobic001G019300 Sobic003G106500--Sobic005G190900 Sobic003G106500--Sobic002G281000 Sobic005G192600 Sobic005G192600 Sobic003G106500--Sobic005G192600 Sobic003G106500--Sobic002G195700 Sobic005G063900--Sobic001G019300 Sobic005G063900--Sobic002G265400 Sobic001G520100 Sobic001G520100 Sobic005G063900--Sobic001G520100 Sobic005G063900--Sobic005G190900 Sobic009G038200 Sobic009G038200 Sobic005G063900--Sobic009G038200 Sobic002G041800 Sobic002G041800 Sobic005G063900--Sobic002G041800 Sobic002G337001 Sobic002G337001 Sobic005G063900--Sobic002G337001 Sobic002G257100 Sobic002G257100 Sobic005G063900--Sobic002G257100 Sobic005G063900--Sobic001G321600 Sobic003G135800--Sobic005G190900 Sobic004G078600 Sobic004G078600 Sobic003G135800--Sobic004G078600 Sobic003G135800--Sobic002G371900 Sobic003G135800--Sobic001G019300 Sobic003G135800--Sobic002G281000 Sobic005G089000 Sobic005G089000 Sobic003G135800--Sobic005G089000 Sobic003G096500 Sobic003G096500 Sobic003G135800--Sobic003G096500 Sobic003G135800--Sobic002G265400 Sobic003G135800--Sobic004G063200 Sobic010G225500--Sobic001G432500 Sobic002G202700 Sobic002G202700 Sobic010G225500--Sobic002G202700 Sobic009G115300 Sobic009G115300 Sobic010G225500--Sobic009G115300 Sobic010G225500--Sobic001G291500 Sobic006G123400 Sobic006G123400 Sobic010G225500--Sobic006G123400 Sobic009G115400 Sobic009G115400 Sobic010G225500--Sobic009G115400 Sobic010G225500--Sobic006G005500 Sobic002G108400 Sobic002G108400 Sobic010G225500--Sobic002G108400 Sobic010G225500--Sobic001G125700 Sobic002G371900--Sobic002G001800 Sobic002G371900--Sobic003G106500 Sobic002G371900--Sobic001G198700 Sobic002G371900--Sobic002G281000 Sobic002G371900--Sobic002G265400 Sobic002G371900--Sobic004G063200 Sobic002G371900--Sobic001G019300 Sobic002G371900--Sobic005G190900 Sobic002G371900--Sobic003G135800
Octagon: transcription factors


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