Gene annotation
Transcriptome id Sobic.005G089000.1
Synonym AtCXE18, Sb05g007270, CXE18
Functional annotation gibberellin receptor GID1L2, putative, expressed
UniProt C5Y862
Pfam PF12695
Panther DB PTHR23024 PTHR23024:SF159
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23530 : carboxyesterase 18
RAP-DB (Rice) LOC_Os11g13670.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a015562 , Zm00025a015554
Brachypodium KQK14954 , KQK14953 , KQK15317 , KQJ98621 , KQJ88843
Barley HORVU2Hr1G025390.1 , HORVU2Hr1G025390.2 , HORVU2Hr1G025360.1 , HORVU4Hr1G015560.1 , HORVU1Hr1G037610.1
Wheat TraesCS2D02G146600 , TraesCS2A02G143000 , TraesCS4A02G224900
Populus -


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cDNA sequences
Sobic.005G089000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G195700 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
2 Sobic.001G321600 dehydration response related protein, putative, expressed -
3 Sobic.008G073400 B-box (BBX) protein(PubMedID : 30626335)@down-regulated TF in developmental senescence(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
4 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
5 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
6 Sobic.003G135800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
7 Sobic.003G291400 dehydrogenase, putative, expressed -
8 Sobic.003G106500 expressed protein -
9 Sobic.001G452700 serine/threonine-protein kinase receptor precursor, putative, expressed -
10 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
11 Sobic.003G402200 sensitivity to red light reduced protein 1, putative, expressed -
12 Sobic.005G190900 MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
13 Sobic.001G198700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
14 Sobic.009G075100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@lachrymatory factor synthase, putative, expressed -
15 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase
16 Sobic.003G151800 expressed protein -
17 Sobic.003G255100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.009G038200 expressed protein -
19 Sobic.007G191900 ACT domain containing protein, expressed -
20 Sobic.001G145050 - -


Gene co-expression network
sample Sobic005G089000 Sobic005G089000 Sobic002G195700 Sobic002G195700 Sobic005G089000--Sobic002G195700 Sobic001G321600 Sobic001G321600 Sobic005G089000--Sobic001G321600 Sobic008G073400 Sobic008G073400 Sobic005G089000--Sobic008G073400 Sobic001G019300 Sobic001G019300 Sobic005G089000--Sobic001G019300 Sobic001G005500 Sobic001G005500 Sobic005G089000--Sobic001G005500 Sobic003G135800 Sobic003G135800 Sobic005G089000--Sobic003G135800 Sobic003G291400 Sobic003G291400 Sobic005G089000--Sobic003G291400 Sobic003G106500 Sobic003G106500 Sobic005G089000--Sobic003G106500 Sobic001G452700 Sobic001G452700 Sobic005G089000--Sobic001G452700 Sobic002G195700--Sobic001G005500 Sobic002G195700--Sobic008G073400 Sobic002G195700--Sobic001G321600 Sobic002G195700--Sobic001G019300 Sobic002G366100 Sobic002G366100 Sobic002G195700--Sobic002G366100 Sobic002G281000 Sobic002G281000 Sobic002G195700--Sobic002G281000 Sobic005G021600 Sobic005G021600 Sobic002G195700--Sobic005G021600 Sobic006G269400 Sobic006G269400 Sobic002G195700--Sobic006G269400 Sobic001G198700 Sobic001G198700 Sobic002G195700--Sobic001G198700 Sobic001G321600--Sobic001G005500 Sobic001G321600--Sobic001G019300 Sobic001G321600--Sobic002G195700 Sobic010G089200 Sobic010G089200 Sobic001G321600--Sobic010G089200 Sobic001G321600--Sobic008G073400 Sobic001G520100 Sobic001G520100 Sobic001G321600--Sobic001G520100 Sobic001G321600--Sobic002G281000 Sobic003G237000 Sobic003G237000 Sobic001G321600--Sobic003G237000 Sobic001G321600--Sobic002G366100 Sobic008G073400--Sobic002G195700 Sobic008G073400--Sobic001G019300 Sobic008G073400--Sobic003G106500 Sobic008G073400--Sobic001G321600 Sobic008G073400--Sobic001G005500 Sobic008G073400--Sobic002G281000 Sobic008G073400--Sobic005G021600 Sobic008G073400--Sobic001G198700 Sobic008G073400--Sobic005G089000 Sobic002G265400 Sobic002G265400 Sobic001G019300--Sobic002G265400 Sobic001G019300--Sobic002G281000 Sobic005G063900 Sobic005G063900 Sobic001G019300--Sobic005G063900 Sobic001G019300--Sobic001G321600 Sobic001G019300--Sobic001G005500 Sobic001G019300--Sobic008G073400 Sobic001G019300--Sobic002G195700 Sobic005G190900 Sobic005G190900 Sobic001G019300--Sobic005G190900 Sobic001G019300--Sobic001G198700 Sobic001G005500--Sobic001G321600 Sobic001G005500--Sobic002G195700 Sobic001G005500--Sobic001G019300 Sobic001G093600 Sobic001G093600 Sobic001G005500--Sobic001G093600 Sobic001G005500--Sobic002G366100 Sobic001G005500--Sobic008G073400 Sobic001G005500--Sobic006G269400 Sobic006G273000 Sobic006G273000 Sobic001G005500--Sobic006G273000 Sobic007G191900 Sobic007G191900 Sobic001G005500--Sobic007G191900 Sobic003G135800--Sobic005G190900 Sobic004G078600 Sobic004G078600 Sobic003G135800--Sobic004G078600 Sobic002G371900 Sobic002G371900 Sobic003G135800--Sobic002G371900 Sobic003G135800--Sobic001G019300 Sobic003G135800--Sobic002G281000 Sobic003G135800--Sobic005G089000 Sobic003G096500 Sobic003G096500 Sobic003G135800--Sobic003G096500 Sobic003G135800--Sobic002G265400 Sobic004G063200 Sobic004G063200 Sobic003G135800--Sobic004G063200 Sobic003G291400--Sobic010G089200 Sobic003G291400--Sobic001G321600 Sobic003G291400--Sobic005G089000 Sobic003G291400--Sobic002G281000 Sobic006G131800 Sobic006G131800 Sobic003G291400--Sobic006G131800 Sobic003G291400--Sobic002G195700 Sobic002G281800 Sobic002G281800 Sobic003G291400--Sobic002G281800 Sobic003G291400--Sobic001G005500 Sobic003G291400--Sobic005G021600 Sobic003G106500--Sobic001G198700 Sobic003G106500--Sobic008G073400 Sobic002G001800 Sobic002G001800 Sobic003G106500--Sobic002G001800 Sobic003G106500--Sobic002G371900 Sobic003G106500--Sobic001G019300 Sobic003G106500--Sobic005G190900 Sobic003G106500--Sobic002G281000 Sobic005G192600 Sobic005G192600 Sobic003G106500--Sobic005G192600 Sobic003G106500--Sobic002G195700 Sobic001G452700--Sobic001G093600 Sobic003G255100 Sobic003G255100 Sobic001G452700--Sobic003G255100 Sobic010G246600 Sobic010G246600 Sobic001G452700--Sobic010G246600 Sobic001G452700--Sobic005G089000 Sobic001G452700--Sobic001G005500 Sobic001G452700--Sobic007G191900 Sobic004G096100 Sobic004G096100 Sobic001G452700--Sobic004G096100 Sobic007G179750 Sobic007G179750 Sobic001G452700--Sobic007G179750 Sobic001G452700--Sobic008G073400
Octagon: transcription factors


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