Gene annotation
Transcriptome id Sobic.003G291400.2
Synonym Sb03g034190
Functional annotation dehydrogenase, putative, expressed
UniProt A0A1W0VZE1
Pfam PF03807 PF14833
Panther DB PTHR22981 PTHR22981:SF70
NCBI CDD KOG0409; Predicted dehydrogenase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G29120 : 6-phosphogluconate dehydrogenase family protein
RAP-DB (Rice) LOC_Os01g53910.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a027652
Brachypodium KQK09667
Barley HORVU3Hr1G070630.1
Wheat -
Populus -


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cDNA sequences
Sobic.003G291400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G089200 expressed protein -
2 Sobic.001G321600 dehydration response related protein, putative, expressed -
3 Sobic.005G089000 gibberellin receptor GID1L2, putative, expressed -
4 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
5 Sobic.006G131800 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
6 Sobic.002G195700 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
7 Sobic.002G281800 expressed protein -
8 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
9 Sobic.005G021600 expressed protein -
10 Sobic.001G525900 homeobox domain containing protein, expressed -
11 Sobic.009G202400 expressed protein -
12 Sobic.001G006400 DANA2, putative, expressed -
13 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
14 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
15 Sobic.004G224500 OsClp3 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
16 Sobic.003G237000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed -
17 Sobic.001G475701 - -
18 Sobic.008G073400 B-box (BBX) protein(PubMedID : 30626335)@down-regulated TF in developmental senescence(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
19 Sobic.004G254000 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
20 Sobic.007G191900 ACT domain containing protein, expressed -


Gene co-expression network
sample Sobic003G291400 Sobic003G291400 Sobic010G089200 Sobic010G089200 Sobic003G291400--Sobic010G089200 Sobic001G321600 Sobic001G321600 Sobic003G291400--Sobic001G321600 Sobic005G089000 Sobic005G089000 Sobic003G291400--Sobic005G089000 Sobic002G281000 Sobic002G281000 Sobic003G291400--Sobic002G281000 Sobic006G131800 Sobic006G131800 Sobic003G291400--Sobic006G131800 Sobic002G195700 Sobic002G195700 Sobic003G291400--Sobic002G195700 Sobic002G281800 Sobic002G281800 Sobic003G291400--Sobic002G281800 Sobic001G005500 Sobic001G005500 Sobic003G291400--Sobic001G005500 Sobic005G021600 Sobic005G021600 Sobic003G291400--Sobic005G021600 Sobic010G089200--Sobic001G321600 Sobic001G520100 Sobic001G520100 Sobic010G089200--Sobic001G520100 Sobic010G089200--Sobic002G195700 Sobic010G089200--Sobic001G005500 Sobic001G019300 Sobic001G019300 Sobic010G089200--Sobic001G019300 Sobic008G063100 Sobic008G063100 Sobic010G089200--Sobic008G063100 Sobic010G089200--Sobic005G021600 Sobic010G089200--Sobic002G281000 Sobic002G257100 Sobic002G257100 Sobic010G089200--Sobic002G257100 Sobic001G321600--Sobic001G005500 Sobic001G321600--Sobic001G019300 Sobic001G321600--Sobic002G195700 Sobic001G321600--Sobic010G089200 Sobic008G073400 Sobic008G073400 Sobic001G321600--Sobic008G073400 Sobic001G321600--Sobic001G520100 Sobic001G321600--Sobic002G281000 Sobic003G237000 Sobic003G237000 Sobic001G321600--Sobic003G237000 Sobic002G366100 Sobic002G366100 Sobic001G321600--Sobic002G366100 Sobic005G089000--Sobic002G195700 Sobic005G089000--Sobic001G321600 Sobic005G089000--Sobic008G073400 Sobic005G089000--Sobic001G019300 Sobic005G089000--Sobic001G005500 Sobic003G135800 Sobic003G135800 Sobic005G089000--Sobic003G135800 Sobic005G089000--Sobic003G291400 Sobic003G106500 Sobic003G106500 Sobic005G089000--Sobic003G106500 Sobic001G452700 Sobic001G452700 Sobic005G089000--Sobic001G452700 Sobic001G525900 Sobic001G525900 Sobic002G281000--Sobic001G525900 Sobic002G281000--Sobic001G019300 Sobic002G281000--Sobic008G063100 Sobic009G202400 Sobic009G202400 Sobic002G281000--Sobic009G202400 Sobic002G281000--Sobic002G195700 Sobic005G097800 Sobic005G097800 Sobic002G281000--Sobic005G097800 Sobic004G063200 Sobic004G063200 Sobic002G281000--Sobic004G063200 Sobic001G404500 Sobic001G404500 Sobic002G281000--Sobic001G404500 Sobic002G281000--Sobic005G021600 Sobic006G131800--Sobic002G281000 Sobic006G131800--Sobic001G404500 Sobic006G131800--Sobic003G291400 Sobic001G314900 Sobic001G314900 Sobic006G131800--Sobic001G314900 Sobic006G131800--Sobic008G063100 Sobic006G131800--Sobic010G089200 Sobic006G131800--Sobic001G525900 Sobic004G224500 Sobic004G224500 Sobic006G131800--Sobic004G224500 Sobic004G254000 Sobic004G254000 Sobic006G131800--Sobic004G254000 Sobic002G195700--Sobic001G005500 Sobic002G195700--Sobic008G073400 Sobic002G195700--Sobic001G321600 Sobic002G195700--Sobic001G019300 Sobic002G195700--Sobic002G366100 Sobic002G195700--Sobic002G281000 Sobic002G195700--Sobic005G021600 Sobic006G269400 Sobic006G269400 Sobic002G195700--Sobic006G269400 Sobic001G198700 Sobic001G198700 Sobic002G195700--Sobic001G198700 Sobic010G080300 Sobic010G080300 Sobic002G281800--Sobic010G080300 Sobic002G281800--Sobic003G291400 Sobic008G072700 Sobic008G072700 Sobic002G281800--Sobic008G072700 Sobic007G046500 Sobic007G046500 Sobic002G281800--Sobic007G046500 Sobic007G029100 Sobic007G029100 Sobic002G281800--Sobic007G029100 Sobic009G190800 Sobic009G190800 Sobic002G281800--Sobic009G190800 Sobic003G310100 Sobic003G310100 Sobic002G281800--Sobic003G310100 Sobic004G152100 Sobic004G152100 Sobic002G281800--Sobic004G152100 Sobic009G029700 Sobic009G029700 Sobic002G281800--Sobic009G029700 Sobic001G005500--Sobic001G321600 Sobic001G005500--Sobic002G195700 Sobic001G005500--Sobic001G019300 Sobic001G093600 Sobic001G093600 Sobic001G005500--Sobic001G093600 Sobic001G005500--Sobic002G366100 Sobic001G005500--Sobic008G073400 Sobic001G005500--Sobic006G269400 Sobic006G273000 Sobic006G273000 Sobic001G005500--Sobic006G273000 Sobic007G191900 Sobic007G191900 Sobic001G005500--Sobic007G191900 Sobic005G021600--Sobic008G063100 Sobic010G265500 Sobic010G265500 Sobic005G021600--Sobic010G265500 Sobic009G028400 Sobic009G028400 Sobic005G021600--Sobic009G028400 Sobic005G021600--Sobic002G195700 Sobic007G178500 Sobic007G178500 Sobic005G021600--Sobic007G178500 Sobic010G218600 Sobic010G218600 Sobic005G021600--Sobic010G218600 Sobic005G021600--Sobic002G281000 Sobic007G132500 Sobic007G132500 Sobic005G021600--Sobic007G132500 Sobic001G006000 Sobic001G006000 Sobic005G021600--Sobic001G006000
Octagon: transcription factors


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