Gene annotation
Transcriptome id Sobic.006G131800.1
Synonym STO, Sb06g021170, B-box (BBX) protein, SbBBX11
Functional annotation B-box (BBX) protein (PubMedID : 30626335)
B-box zinc finger family protein, putative, expressed
UniProt C5YBE4
Pfam PF00643
Panther DB PTHR31832 PTHR31832:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005622intracellular


Orthologs (automatic annotation)
TAIR AT1G06040 : B-box zinc finger family protein
RAP-DB (Rice) LOC_Os04g41560.2 : B-box zinc finger family protein, putative, expressed
MaizeGDB (Corn) Zm00025a032155 , Zm00025a010859 , Zm00025a031881 , Zm00025a021250
Brachypodium KQJ83320 , KQJ83321 , KQK00247
Barley -
Wheat TraesCS2B02G367300 , TraesCS2B02G367300 , TraesCS6D02G199200 , TraesCS6B02G246500 , TraesCS2A02G366100 , TraesCS2A02G366100 , TraesCS2D02G347300 , TraesCS2D02G347300 , TraesCS2A02G348900 , TraesCS6A02G216400
Populus -


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cDNA sequences
Sobic.006G131800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
2 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
3 Sobic.003G291400 dehydrogenase, putative, expressed -
4 Sobic.001G314900 homeobox domain containing protein, expressed -
5 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
6 Sobic.010G089200 expressed protein -
7 Sobic.001G525900 homeobox domain containing protein, expressed -
8 Sobic.004G224500 OsClp3 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
9 Sobic.004G254000 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
10 Sobic.010G269400 DNL zinc finger domain containing protein, putative, expressed -
11 Sobic.002G257100 regulatory protein, putative, expressed -
12 Sobic.005G097800 eukaryotic aspartyl protease domain containing protein, expressed -
13 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
14 Sobic.005G093300 - -
15 Sobic.009G202400 expressed protein -
16 Sobic.006G164300 YELLOW STRIPE like 2(PubMedID : 26465154)@- -
17 Sobic.002G371900 DC1 domain-containing protein, putative, expressed -
18 Sobic.004G063200 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
19 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
20 Sobic.005G220900 expressed protein -


Gene co-expression network
sample Sobic006G131800 Sobic006G131800 Sobic002G281000 Sobic002G281000 Sobic006G131800--Sobic002G281000 Sobic001G404500 Sobic001G404500 Sobic006G131800--Sobic001G404500 Sobic003G291400 Sobic003G291400 Sobic006G131800--Sobic003G291400 Sobic001G314900 Sobic001G314900 Sobic006G131800--Sobic001G314900 Sobic008G063100 Sobic008G063100 Sobic006G131800--Sobic008G063100 Sobic010G089200 Sobic010G089200 Sobic006G131800--Sobic010G089200 Sobic001G525900 Sobic001G525900 Sobic006G131800--Sobic001G525900 Sobic004G224500 Sobic004G224500 Sobic006G131800--Sobic004G224500 Sobic004G254000 Sobic004G254000 Sobic006G131800--Sobic004G254000 Sobic002G281000--Sobic001G525900 Sobic001G019300 Sobic001G019300 Sobic002G281000--Sobic001G019300 Sobic002G281000--Sobic008G063100 Sobic009G202400 Sobic009G202400 Sobic002G281000--Sobic009G202400 Sobic002G195700 Sobic002G195700 Sobic002G281000--Sobic002G195700 Sobic005G097800 Sobic005G097800 Sobic002G281000--Sobic005G097800 Sobic004G063200 Sobic004G063200 Sobic002G281000--Sobic004G063200 Sobic002G281000--Sobic001G404500 Sobic005G021600 Sobic005G021600 Sobic002G281000--Sobic005G021600 Sobic006G123500 Sobic006G123500 Sobic001G404500--Sobic006G123500 Sobic001G404500--Sobic004G063200 Sobic001G404500--Sobic002G281000 Sobic001G404500--Sobic008G063100 Sobic001G404500--Sobic001G525900 Sobic003G410900 Sobic003G410900 Sobic001G404500--Sobic003G410900 Sobic004G268500 Sobic004G268500 Sobic001G404500--Sobic004G268500 Sobic009G189000 Sobic009G189000 Sobic001G404500--Sobic009G189000 Sobic004G099700 Sobic004G099700 Sobic001G404500--Sobic004G099700 Sobic003G291400--Sobic010G089200 Sobic001G321600 Sobic001G321600 Sobic003G291400--Sobic001G321600 Sobic005G089000 Sobic005G089000 Sobic003G291400--Sobic005G089000 Sobic003G291400--Sobic002G281000 Sobic003G291400--Sobic006G131800 Sobic003G291400--Sobic002G195700 Sobic002G281800 Sobic002G281800 Sobic003G291400--Sobic002G281800 Sobic001G005500 Sobic001G005500 Sobic003G291400--Sobic001G005500 Sobic003G291400--Sobic005G021600 Sobic001G314900--Sobic001G404500 Sobic001G314900--Sobic004G224500 Sobic006G258700 Sobic006G258700 Sobic001G314900--Sobic006G258700 Sobic001G314900--Sobic001G525900 Sobic010G269400 Sobic010G269400 Sobic001G314900--Sobic010G269400 Sobic001G314900--Sobic006G131800 Sobic010G193000 Sobic010G193000 Sobic001G314900--Sobic010G193000 Sobic002G257100 Sobic002G257100 Sobic001G314900--Sobic002G257100 Sobic004G201700 Sobic004G201700 Sobic001G314900--Sobic004G201700 Sobic004G343100 Sobic004G343100 Sobic008G063100--Sobic004G343100 Sobic008G063100--Sobic005G021600 Sobic008G063100--Sobic002G281000 Sobic008G063100--Sobic001G404500 Sobic001G198700 Sobic001G198700 Sobic008G063100--Sobic001G198700 Sobic008G063100--Sobic004G063200 Sobic008G063100--Sobic002G195700 Sobic008G063100--Sobic009G202400 Sobic005G175600 Sobic005G175600 Sobic008G063100--Sobic005G175600 Sobic010G089200--Sobic001G321600 Sobic001G520100 Sobic001G520100 Sobic010G089200--Sobic001G520100 Sobic010G089200--Sobic002G195700 Sobic010G089200--Sobic001G005500 Sobic010G089200--Sobic001G019300 Sobic010G089200--Sobic008G063100 Sobic010G089200--Sobic005G021600 Sobic010G089200--Sobic002G281000 Sobic010G089200--Sobic002G257100 Sobic001G525900--Sobic002G281000 Sobic001G525900--Sobic001G404500 Sobic001G525900--Sobic001G019300 Sobic001G525900--Sobic005G021600 Sobic006G164300 Sobic006G164300 Sobic001G525900--Sobic006G164300 Sobic001G048000 Sobic001G048000 Sobic001G525900--Sobic001G048000 Sobic001G525900--Sobic008G063100 Sobic001G525900--Sobic004G063200 Sobic001G525900--Sobic001G321600 Sobic006G110900 Sobic006G110900 Sobic004G224500--Sobic006G110900 Sobic002G046900 Sobic002G046900 Sobic004G224500--Sobic002G046900 Sobic004G224500--Sobic005G021600 Sobic006G214700 Sobic006G214700 Sobic004G224500--Sobic006G214700 Sobic004G224500--Sobic001G525900 Sobic008G063200 Sobic008G063200 Sobic004G224500--Sobic008G063200 Sobic003G179400 Sobic003G179400 Sobic004G224500--Sobic003G179400 Sobic001G006000 Sobic001G006000 Sobic004G224500--Sobic001G006000 Sobic004G224500--Sobic001G314900 Sobic004G254000--Sobic001G525900 Sobic004G254000--Sobic006G131800 Sobic004G254000--Sobic003G291400 Sobic003G135800 Sobic003G135800 Sobic004G254000--Sobic003G135800 Sobic004G254000--Sobic002G281000 Sobic004G254000--Sobic010G089200 Sobic004G254000--Sobic001G321600 Sobic004G254000--Sobic001G019300 Sobic004G254000--Sobic004G224500
Octagon: transcription factors


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