Gene annotation
Transcriptome id Sobic.002G257100.1
Synonym Sb02g029220
Functional annotation regulatory protein, putative, expressed
UniProt C5X4P6
Pfam PF03407
Panther DB PTHR24015 PTHR24015:SF627
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G19970 : -
RAP-DB (Rice) LOC_Os08g41800.1 : regulatory protein, putative, expressed
MaizeGDB (Corn) Zm00025a029781 , Zm00025a047568 , Zm00025a047567 , Zm00025a015668
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G257100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G209100 glutamate receptor, putative, expressed -
2 Sobic.002G041800 gibberellin receptor GID1L2, putative, expressed -
3 Sobic.001G321600 dehydration response related protein, putative, expressed -
4 Sobic.010G089200 expressed protein -
5 Sobic.004G258400 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
6 Sobic.001G520100 MLO domain containing protein, putative, expressed K08472: mlo protein
7 Sobic.005G093300 - -
8 Sobic.002G265400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
9 Sobic.005G063900 expressed protein -
10 Sobic.004G063200 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
11 Sobic.004G195800 heavy metal associated domain containing protein, expressed -
12 Sobic.001G145050 - -
13 Sobic.010G193000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.006G060800 basic proline-rich protein, putative, expressed -
15 Sobic.010G120800 Leucine-rich repeat receptor-like serine/threonine/tyrosine protein kinase(PubMedID : 31721651)@protein kinase domain containing protein, expressed -
16 Sobic.003G284300 expressed protein -
17 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
18 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
19 Sobic.009G037200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
20 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -


Gene co-expression network
sample Sobic002G257100 Sobic002G257100 Sobic002G209100 Sobic002G209100 Sobic002G257100--Sobic002G209100 Sobic002G041800 Sobic002G041800 Sobic002G257100--Sobic002G041800 Sobic001G321600 Sobic001G321600 Sobic002G257100--Sobic001G321600 Sobic010G089200 Sobic010G089200 Sobic002G257100--Sobic010G089200 Sobic004G258400 Sobic004G258400 Sobic002G257100--Sobic004G258400 Sobic001G520100 Sobic001G520100 Sobic002G257100--Sobic001G520100 Sobic005G093300 Sobic005G093300 Sobic002G257100--Sobic005G093300 Sobic002G265400 Sobic002G265400 Sobic002G257100--Sobic002G265400 Sobic005G063900 Sobic005G063900 Sobic002G257100--Sobic005G063900 Sobic004G195800 Sobic004G195800 Sobic002G209100--Sobic004G195800 Sobic002G209100--Sobic002G041800 Sobic005G085500 Sobic005G085500 Sobic002G209100--Sobic005G085500 Sobic010G120800 Sobic010G120800 Sobic002G209100--Sobic010G120800 Sobic009G252100 Sobic009G252100 Sobic002G209100--Sobic009G252100 Sobic004G217700 Sobic004G217700 Sobic002G209100--Sobic004G217700 Sobic002G271600 Sobic002G271600 Sobic002G209100--Sobic002G271600 Sobic004G209500 Sobic004G209500 Sobic002G209100--Sobic004G209500 Sobic002G209100--Sobic002G257100 Sobic002G041800--Sobic005G085500 Sobic004G078600 Sobic004G078600 Sobic002G041800--Sobic004G078600 Sobic002G423600 Sobic002G423600 Sobic002G041800--Sobic002G423600 Sobic002G041800--Sobic004G195800 Sobic002G041800--Sobic009G252100 Sobic002G041800--Sobic004G217700 Sobic002G041800--Sobic002G209100 Sobic006G060800 Sobic006G060800 Sobic002G041800--Sobic006G060800 Sobic001G201800 Sobic001G201800 Sobic002G041800--Sobic001G201800 Sobic001G005500 Sobic001G005500 Sobic001G321600--Sobic001G005500 Sobic001G019300 Sobic001G019300 Sobic001G321600--Sobic001G019300 Sobic002G195700 Sobic002G195700 Sobic001G321600--Sobic002G195700 Sobic001G321600--Sobic010G089200 Sobic008G073400 Sobic008G073400 Sobic001G321600--Sobic008G073400 Sobic001G321600--Sobic001G520100 Sobic002G281000 Sobic002G281000 Sobic001G321600--Sobic002G281000 Sobic003G237000 Sobic003G237000 Sobic001G321600--Sobic003G237000 Sobic002G366100 Sobic002G366100 Sobic001G321600--Sobic002G366100 Sobic010G089200--Sobic001G321600 Sobic010G089200--Sobic001G520100 Sobic010G089200--Sobic002G195700 Sobic010G089200--Sobic001G005500 Sobic010G089200--Sobic001G019300 Sobic008G063100 Sobic008G063100 Sobic010G089200--Sobic008G063100 Sobic005G021600 Sobic005G021600 Sobic010G089200--Sobic005G021600 Sobic010G089200--Sobic002G281000 Sobic010G089200--Sobic002G257100 Sobic004G258400--Sobic002G257100 Sobic008G142100 Sobic008G142100 Sobic004G258400--Sobic008G142100 Sobic001G136300 Sobic001G136300 Sobic004G258400--Sobic001G136300 Sobic004G258400--Sobic002G041800 Sobic001G450500 Sobic001G450500 Sobic004G258400--Sobic001G450500 Sobic006G246200 Sobic006G246200 Sobic004G258400--Sobic006G246200 Sobic004G258400--Sobic005G093300 Sobic001G362001 Sobic001G362001 Sobic004G258400--Sobic001G362001 Sobic009G037200 Sobic009G037200 Sobic004G258400--Sobic009G037200 Sobic001G520100--Sobic001G321600 Sobic001G520100--Sobic010G089200 Sobic001G520100--Sobic005G063900 Sobic001G520100--Sobic001G019300 Sobic010G179500 Sobic010G179500 Sobic001G520100--Sobic010G179500 Sobic001G520100--Sobic002G257100 Sobic001G198700 Sobic001G198700 Sobic001G520100--Sobic001G198700 Sobic001G520100--Sobic008G073400 Sobic009G153200 Sobic009G153200 Sobic001G520100--Sobic009G153200 Sobic005G093300--Sobic001G198700 Sobic009G202400 Sobic009G202400 Sobic005G093300--Sobic009G202400 Sobic007G037800 Sobic007G037800 Sobic005G093300--Sobic007G037800 Sobic005G093300--Sobic002G257100 Sobic005G093300--Sobic002G265400 Sobic005G093300--Sobic001G201800 Sobic005G093300--Sobic009G252100 Sobic005G093300--Sobic001G019300 Sobic005G093300--Sobic002G366100 Sobic002G265400--Sobic001G019300 Sobic004G063200 Sobic004G063200 Sobic002G265400--Sobic004G063200 Sobic002G265400--Sobic005G063900 Sobic002G265400--Sobic002G281000 Sobic002G265400--Sobic001G198700 Sobic005G190900 Sobic005G190900 Sobic002G265400--Sobic005G190900 Sobic002G265400--Sobic009G202400 Sobic002G371900 Sobic002G371900 Sobic002G265400--Sobic002G371900 Sobic002G265400--Sobic009G252100 Sobic005G063900--Sobic001G019300 Sobic005G063900--Sobic002G265400 Sobic005G063900--Sobic001G520100 Sobic005G063900--Sobic005G190900 Sobic009G038200 Sobic009G038200 Sobic005G063900--Sobic009G038200 Sobic005G063900--Sobic002G041800 Sobic002G337001 Sobic002G337001 Sobic005G063900--Sobic002G337001 Sobic005G063900--Sobic002G257100 Sobic005G063900--Sobic001G321600
Octagon: transcription factors


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