Gene annotation
Transcriptome id Sobic.003G284300.1
Synonym Sb03g033560
Functional annotation expressed protein
UniProt C5XJ09
Pfam -
Panther DB PTHR34541 PTHR34541:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14830 : -
RAP-DB (Rice) LOC_Os01g52920.1 : expressed protein
MaizeGDB (Corn) Zm00025a039014 , Zm00025a027711
Brachypodium KQK09579 , KQK05250 , KQK05249
Barley HORVU3Hr1G069260.1
Wheat TraesCS3A02G282500 , TraesCS3B02G316200 , TraesCS3D02G282500
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G284300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G038200 expressed protein -
2 Sobic.006G273000 AT hook motif domain containing protein, expressed -
3 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
4 Sobic.001G321600 dehydration response related protein, putative, expressed -
5 Sobic.001G093600 - -
6 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
7 Sobic.006G197800 zinc-binding protein, putative, expressed -
8 Sobic.005G063900 expressed protein -
9 Sobic.007G014600 transferase family protein, putative, expressed -
10 Sobic.010G245100 lectin-like receptor kinase 1, putative, expressed -
11 Sobic.002G257100 regulatory protein, putative, expressed -
12 Sobic.001G275200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
13 Sobic.002G265400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
14 Sobic.005G203900 OsGrx_C17 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
15 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
16 Sobic.002G271600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
17 Sobic.001G525900 homeobox domain containing protein, expressed -
18 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
19 Sobic.010G246600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed -
20 Sobic.010G089200 expressed protein -


Gene co-expression network
sample Sobic003G284300 Sobic003G284300 Sobic009G038200 Sobic009G038200 Sobic003G284300--Sobic009G038200 Sobic006G273000 Sobic006G273000 Sobic003G284300--Sobic006G273000 Sobic001G005500 Sobic001G005500 Sobic003G284300--Sobic001G005500 Sobic001G321600 Sobic001G321600 Sobic003G284300--Sobic001G321600 Sobic001G093600 Sobic001G093600 Sobic003G284300--Sobic001G093600 Sobic001G019300 Sobic001G019300 Sobic003G284300--Sobic001G019300 Sobic006G197800 Sobic006G197800 Sobic003G284300--Sobic006G197800 Sobic005G063900 Sobic005G063900 Sobic003G284300--Sobic005G063900 Sobic007G014600 Sobic007G014600 Sobic003G284300--Sobic007G014600 Sobic009G038200--Sobic003G284300 Sobic009G038200--Sobic005G063900 Sobic009G038200--Sobic001G321600 Sobic009G038200--Sobic001G019300 Sobic005G190900 Sobic005G190900 Sobic009G038200--Sobic005G190900 Sobic001G449800 Sobic001G449800 Sobic009G038200--Sobic001G449800 Sobic002G209100 Sobic002G209100 Sobic009G038200--Sobic002G209100 Sobic009G153200 Sobic009G153200 Sobic009G038200--Sobic009G153200 Sobic002G041800 Sobic002G041800 Sobic009G038200--Sobic002G041800 Sobic001G275200 Sobic001G275200 Sobic006G273000--Sobic001G275200 Sobic006G273000--Sobic001G093600 Sobic010G245100 Sobic010G245100 Sobic006G273000--Sobic010G245100 Sobic006G273000--Sobic003G284300 Sobic006G273000--Sobic001G005500 Sobic009G213400 Sobic009G213400 Sobic006G273000--Sobic009G213400 Sobic010G246600 Sobic010G246600 Sobic006G273000--Sobic010G246600 Sobic010G052500 Sobic010G052500 Sobic006G273000--Sobic010G052500 Sobic007G179750 Sobic007G179750 Sobic006G273000--Sobic007G179750 Sobic001G005500--Sobic001G321600 Sobic002G195700 Sobic002G195700 Sobic001G005500--Sobic002G195700 Sobic001G005500--Sobic001G019300 Sobic001G005500--Sobic001G093600 Sobic002G366100 Sobic002G366100 Sobic001G005500--Sobic002G366100 Sobic008G073400 Sobic008G073400 Sobic001G005500--Sobic008G073400 Sobic006G269400 Sobic006G269400 Sobic001G005500--Sobic006G269400 Sobic001G005500--Sobic006G273000 Sobic007G191900 Sobic007G191900 Sobic001G005500--Sobic007G191900 Sobic001G321600--Sobic001G005500 Sobic001G321600--Sobic001G019300 Sobic001G321600--Sobic002G195700 Sobic010G089200 Sobic010G089200 Sobic001G321600--Sobic010G089200 Sobic001G321600--Sobic008G073400 Sobic001G520100 Sobic001G520100 Sobic001G321600--Sobic001G520100 Sobic002G281000 Sobic002G281000 Sobic001G321600--Sobic002G281000 Sobic003G237000 Sobic003G237000 Sobic001G321600--Sobic003G237000 Sobic001G321600--Sobic002G366100 Sobic003G107300 Sobic003G107300 Sobic001G093600--Sobic003G107300 Sobic001G093600--Sobic006G273000 Sobic001G093600--Sobic001G005500 Sobic001G093600--Sobic001G275200 Sobic003G255100 Sobic003G255100 Sobic001G093600--Sobic003G255100 Sobic001G093600--Sobic007G179750 Sobic001G093600--Sobic003G284300 Sobic001G093600--Sobic007G191900 Sobic001G093600--Sobic001G321600 Sobic002G265400 Sobic002G265400 Sobic001G019300--Sobic002G265400 Sobic001G019300--Sobic002G281000 Sobic001G019300--Sobic005G063900 Sobic001G019300--Sobic001G321600 Sobic001G019300--Sobic001G005500 Sobic001G019300--Sobic008G073400 Sobic001G019300--Sobic002G195700 Sobic001G019300--Sobic005G190900 Sobic001G198700 Sobic001G198700 Sobic001G019300--Sobic001G198700 Sobic006G197800--Sobic003G284300 Sobic001G288100 Sobic001G288100 Sobic006G197800--Sobic001G288100 Sobic003G391100 Sobic003G391100 Sobic006G197800--Sobic003G391100 Sobic002G257100 Sobic002G257100 Sobic006G197800--Sobic002G257100 Sobic002G376000 Sobic002G376000 Sobic006G197800--Sobic002G376000 Sobic010G157500 Sobic010G157500 Sobic006G197800--Sobic010G157500 Sobic003G123300 Sobic003G123300 Sobic006G197800--Sobic003G123300 Sobic006G197800--Sobic009G038200 Sobic006G197800--Sobic009G213400 Sobic005G063900--Sobic001G019300 Sobic005G063900--Sobic002G265400 Sobic005G063900--Sobic001G520100 Sobic005G063900--Sobic005G190900 Sobic005G063900--Sobic009G038200 Sobic005G063900--Sobic002G041800 Sobic002G337001 Sobic002G337001 Sobic005G063900--Sobic002G337001 Sobic005G063900--Sobic002G257100 Sobic005G063900--Sobic001G321600 Sobic002G271600 Sobic002G271600 Sobic007G014600--Sobic002G271600 Sobic004G096300 Sobic004G096300 Sobic007G014600--Sobic004G096300 Sobic006G053700 Sobic006G053700 Sobic007G014600--Sobic006G053700 Sobic001G030500 Sobic001G030500 Sobic007G014600--Sobic001G030500 Sobic007G014600--Sobic002G209100 Sobic009G205600 Sobic009G205600 Sobic007G014600--Sobic009G205600 Sobic007G014600--Sobic003G255100 Sobic006G152500 Sobic006G152500 Sobic007G014600--Sobic006G152500 Sobic007G014600--Sobic003G284300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.