Gene annotation
Transcriptome id Sobic.006G197800.1
Synonym Sb06g027000
Functional annotation zinc-binding protein, putative, expressed
UniProt C5YF04
Pfam PF04640
Panther DB PTHR31065 PTHR31065:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G17900 : PLATZ transcription factor family protein
RAP-DB (Rice) LOC_Os04g50120.1 : zinc-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a051825 , Zm00025a021604 , Zm00025a009996 , Zm00025a032374 , Zm00025a056724 , Zm00025a051497
Brachypodium PNT65210 , KQJ84303 , KQK00840 , KQJ97925 , PNT69258
Barley HORVU1Hr1G050480.4 , HORVU6Hr1G067060.1 , HORVU6Hr1G067060.3 , HORVU6Hr1G067060.2 , HORVU6Hr1G067060.5 , HORVU6Hr1G067060.4 , HORVU6Hr1G067060.7 , HORVU1Hr1G050480.2 , HORVU1Hr1G050480.3 , HORVU1Hr1G050480.1 , HORVU1Hr1G050480.6 , HORVU1Hr1G050480.5
Wheat TraesCS6D02G250500 , TraesCS2D02G447400 , TraesCS1D02G196400 , TraesCS1A02G192800 , TraesCS6A02G264400 , TraesCS6A02G264400 , TraesCS2B02G469000 , TraesCS7A02G394800 , TraesCS6B02G291400 , TraesCS7B02G296800 , TraesCS2A02G496300 , TraesCS1B02G207700 , TraesCS2A02G448300 , TraesCS7D02G390300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G284300 expressed protein -
2 Sobic.001G288100 zinc-binding protein, putative, expressed -
3 Sobic.003G391100 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.002G257100 regulatory protein, putative, expressed -
5 Sobic.002G376000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
6 Sobic.010G157500 zinc finger protein, putative, expressed -
7 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
8 Sobic.009G038200 expressed protein -
9 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
10 Sobic.010G245100 lectin-like receptor kinase 1, putative, expressed -
11 Sobic.006G273000 AT hook motif domain containing protein, expressed -
12 Sobic.003G359900 C2 domain containing protein, expressed -
13 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -
14 Sobic.001G526000 hydrolase, alpha/beta fold family protein, putative, expressed -
15 Sobic.001G321600 dehydration response related protein, putative, expressed -
16 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
17 Sobic.008G002700 receptor protein kinase CRINKLY4 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
18 Sobic.006G053700 ACT domain containing protein, expressed -
19 Sobic.002G271600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
20 Sobic.001G465100 hydrolase, alpha/beta fold family domain containing protein, expressed -


Gene co-expression network
sample Sobic006G197800 Sobic006G197800 Sobic003G284300 Sobic003G284300 Sobic006G197800--Sobic003G284300 Sobic001G288100 Sobic001G288100 Sobic006G197800--Sobic001G288100 Sobic003G391100 Sobic003G391100 Sobic006G197800--Sobic003G391100 Sobic002G257100 Sobic002G257100 Sobic006G197800--Sobic002G257100 Sobic002G376000 Sobic002G376000 Sobic006G197800--Sobic002G376000 Sobic010G157500 Sobic010G157500 Sobic006G197800--Sobic010G157500 Sobic003G123300 Sobic003G123300 Sobic006G197800--Sobic003G123300 Sobic009G038200 Sobic009G038200 Sobic006G197800--Sobic009G038200 Sobic009G213400 Sobic009G213400 Sobic006G197800--Sobic009G213400 Sobic003G284300--Sobic009G038200 Sobic006G273000 Sobic006G273000 Sobic003G284300--Sobic006G273000 Sobic001G005500 Sobic001G005500 Sobic003G284300--Sobic001G005500 Sobic001G321600 Sobic001G321600 Sobic003G284300--Sobic001G321600 Sobic001G093600 Sobic001G093600 Sobic003G284300--Sobic001G093600 Sobic001G019300 Sobic001G019300 Sobic003G284300--Sobic001G019300 Sobic003G284300--Sobic006G197800 Sobic005G063900 Sobic005G063900 Sobic003G284300--Sobic005G063900 Sobic007G014600 Sobic007G014600 Sobic003G284300--Sobic007G014600 Sobic001G450500 Sobic001G450500 Sobic001G288100--Sobic001G450500 Sobic001G288100--Sobic006G197800 Sobic001G288100--Sobic002G376000 Sobic006G174600 Sobic006G174600 Sobic001G288100--Sobic006G174600 Sobic005G229400 Sobic005G229400 Sobic001G288100--Sobic005G229400 Sobic004G114500 Sobic004G114500 Sobic001G288100--Sobic004G114500 Sobic009G100500 Sobic009G100500 Sobic001G288100--Sobic009G100500 Sobic001G288100--Sobic002G257100 Sobic001G526000 Sobic001G526000 Sobic001G288100--Sobic001G526000 Sobic001G465100 Sobic001G465100 Sobic003G391100--Sobic001G465100 Sobic003G391100--Sobic006G197800 Sobic008G042500 Sobic008G042500 Sobic003G391100--Sobic008G042500 Sobic003G391100--Sobic003G284300 Sobic001G053900 Sobic001G053900 Sobic003G391100--Sobic001G053900 Sobic003G391100--Sobic003G123300 Sobic004G096300 Sobic004G096300 Sobic003G391100--Sobic004G096300 Sobic010G214000 Sobic010G214000 Sobic003G391100--Sobic010G214000 Sobic010G245100 Sobic010G245100 Sobic003G391100--Sobic010G245100 Sobic002G209100 Sobic002G209100 Sobic002G257100--Sobic002G209100 Sobic002G041800 Sobic002G041800 Sobic002G257100--Sobic002G041800 Sobic002G257100--Sobic001G321600 Sobic010G089200 Sobic010G089200 Sobic002G257100--Sobic010G089200 Sobic004G258400 Sobic004G258400 Sobic002G257100--Sobic004G258400 Sobic001G520100 Sobic001G520100 Sobic002G257100--Sobic001G520100 Sobic005G093300 Sobic005G093300 Sobic002G257100--Sobic005G093300 Sobic002G265400 Sobic002G265400 Sobic002G257100--Sobic002G265400 Sobic002G257100--Sobic005G063900 Sobic006G167800 Sobic006G167800 Sobic002G376000--Sobic006G167800 Sobic002G376000--Sobic001G288100 Sobic010G179800 Sobic010G179800 Sobic002G376000--Sobic010G179800 Sobic002G376000--Sobic001G526000 Sobic001G093900 Sobic001G093900 Sobic002G376000--Sobic001G093900 Sobic001G024500 Sobic001G024500 Sobic002G376000--Sobic001G024500 Sobic002G269400 Sobic002G269400 Sobic002G376000--Sobic002G269400 Sobic004G110400 Sobic004G110400 Sobic002G376000--Sobic004G110400 Sobic001G075000 Sobic001G075000 Sobic002G376000--Sobic001G075000 Sobic003G296300 Sobic003G296300 Sobic010G157500--Sobic003G296300 Sobic010G157500--Sobic009G038200 Sobic010G157500--Sobic006G167800 Sobic003G013600 Sobic003G013600 Sobic010G157500--Sobic003G013600 Sobic003G065600 Sobic003G065600 Sobic010G157500--Sobic003G065600 Sobic010G157500--Sobic002G209100 Sobic008G018600 Sobic008G018600 Sobic010G157500--Sobic008G018600 Sobic004G195800 Sobic004G195800 Sobic010G157500--Sobic004G195800 Sobic010G157500--Sobic001G093900 Sobic003G123300--Sobic003G013600 Sobic003G123300--Sobic001G465100 Sobic006G051100 Sobic006G051100 Sobic003G123300--Sobic006G051100 Sobic001G225600 Sobic001G225600 Sobic003G123300--Sobic001G225600 Sobic002G421600 Sobic002G421600 Sobic003G123300--Sobic002G421600 Sobic006G241350 Sobic006G241350 Sobic003G123300--Sobic006G241350 Sobic002G367700 Sobic002G367700 Sobic003G123300--Sobic002G367700 Sobic001G530350 Sobic001G530350 Sobic003G123300--Sobic001G530350 Sobic010G267000 Sobic010G267000 Sobic003G123300--Sobic010G267000 Sobic009G038200--Sobic003G284300 Sobic009G038200--Sobic005G063900 Sobic009G038200--Sobic001G321600 Sobic009G038200--Sobic001G019300 Sobic005G190900 Sobic005G190900 Sobic009G038200--Sobic005G190900 Sobic001G449800 Sobic001G449800 Sobic009G038200--Sobic001G449800 Sobic009G038200--Sobic002G209100 Sobic009G153200 Sobic009G153200 Sobic009G038200--Sobic009G153200 Sobic009G038200--Sobic002G041800 Sobic009G213400--Sobic010G245100 Sobic001G377000 Sobic001G377000 Sobic009G213400--Sobic001G377000 Sobic009G213400--Sobic004G096300 Sobic009G213400--Sobic006G273000 Sobic003G222300 Sobic003G222300 Sobic009G213400--Sobic003G222300 Sobic001G191200 Sobic001G191200 Sobic009G213400--Sobic001G191200 Sobic006G053700 Sobic006G053700 Sobic009G213400--Sobic006G053700 Sobic009G213400--Sobic001G093600 Sobic010G052500 Sobic010G052500 Sobic009G213400--Sobic010G052500
Octagon: transcription factors


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