Gene annotation
Transcriptome id Sobic.005G229400.1
Synonym GRAS2, SCL14, ATGRAS2, Sb05g027740
Functional annotation GRAS family transcription factor domain containing protein, expressed
UniProt A0A1Z5RKX2
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF59
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G07530 : SCARECROW-like 14
RAP-DB (Rice) LOC_Os11g47870.1 : GRAS family transcription factor domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029081 , Zm00025a029082
Brachypodium KQJ92435 , KQJ92434 , KQK10137 , PNT62872 , KQJ86191 , PNT62876
Barley HORVU4Hr1G080460.8 , HORVU4Hr1G080460.9 , HORVU4Hr1G080460.4 , HORVU4Hr1G080460.5 , HORVU4Hr1G080460.6 , HORVU4Hr1G080460.7 , HORVU4Hr1G080460.3 , HORVU5Hr1G063270.3 , HORVU5Hr1G063270.2 , HORVU5Hr1G063270.1
Wheat TraesCS4D02G136500 , TraesCS4B02G141400 , TraesCS5D02G092000 , TraesCS5A02G080300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G009400 G-protein alpha subunit, putative, expressed -
2 Sobic.002G301800 GRAS family transcription factor domain containing protein, expressed -
3 Sobic.001G285000 - -
4 Sobic.001G045000 CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
5 Sobic.009G156300 pleckstrin homology domain-containing protein, putative, expressed -
6 Sobic.004G227300 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
7 Sobic.001G288100 zinc-binding protein, putative, expressed -
8 Sobic.009G100500 WRKY53, expressed K13424: WRKY transcription factor 33
9 Sobic.001G162100 WRKY94, expressed -
10 Sobic.004G275200 zinc-binding protein, putative, expressed -
11 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
12 Sobic.002G251700 no apical meristem protein, putative, expressed -
13 Sobic.006G138500 wall-associated receptor kinase-like 20 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
14 Sobic.001G321500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX391 - F-box domain containing protein, expressed -
15 Sobic.001G526000 hydrolase, alpha/beta fold family protein, putative, expressed -
16 Sobic.002G117200 B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
17 Sobic.002G130700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed -
18 Sobic.005G129400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.006G152600 - -
20 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3


Gene co-expression network
sample Sobic005G229400 Sobic005G229400 Sobic010G009400 Sobic010G009400 Sobic005G229400--Sobic010G009400 Sobic002G301800 Sobic002G301800 Sobic005G229400--Sobic002G301800 Sobic001G285000 Sobic001G285000 Sobic005G229400--Sobic001G285000 Sobic001G045000 Sobic001G045000 Sobic005G229400--Sobic001G045000 Sobic009G156300 Sobic009G156300 Sobic005G229400--Sobic009G156300 Sobic004G227300 Sobic004G227300 Sobic005G229400--Sobic004G227300 Sobic001G288100 Sobic001G288100 Sobic005G229400--Sobic001G288100 Sobic009G100500 Sobic009G100500 Sobic005G229400--Sobic009G100500 Sobic001G162100 Sobic001G162100 Sobic005G229400--Sobic001G162100 Sobic002G251700 Sobic002G251700 Sobic010G009400--Sobic002G251700 Sobic010G009400--Sobic005G229400 Sobic010G009400--Sobic002G301800 Sobic010G009400--Sobic001G162100 Sobic006G225600 Sobic006G225600 Sobic010G009400--Sobic006G225600 Sobic001G387600 Sobic001G387600 Sobic010G009400--Sobic001G387600 Sobic003G413500 Sobic003G413500 Sobic010G009400--Sobic003G413500 Sobic010G009400--Sobic004G227300 Sobic006G119800 Sobic006G119800 Sobic010G009400--Sobic006G119800 Sobic002G301800--Sobic005G229400 Sobic002G301800--Sobic010G009400 Sobic008G090600 Sobic008G090600 Sobic002G301800--Sobic008G090600 Sobic002G301800--Sobic003G413500 Sobic009G138200 Sobic009G138200 Sobic002G301800--Sobic009G138200 Sobic004G281300 Sobic004G281300 Sobic002G301800--Sobic004G281300 Sobic004G237600 Sobic004G237600 Sobic002G301800--Sobic004G237600 Sobic003G436300 Sobic003G436300 Sobic002G301800--Sobic003G436300 Sobic002G301800--Sobic002G251700 Sobic001G285000--Sobic009G156300 Sobic004G352900 Sobic004G352900 Sobic001G285000--Sobic004G352900 Sobic010G066300 Sobic010G066300 Sobic001G285000--Sobic010G066300 Sobic001G321500 Sobic001G321500 Sobic001G285000--Sobic001G321500 Sobic001G285000--Sobic005G229400 Sobic002G117200 Sobic002G117200 Sobic001G285000--Sobic002G117200 Sobic001G410100 Sobic001G410100 Sobic001G285000--Sobic001G410100 Sobic003G296300 Sobic003G296300 Sobic001G285000--Sobic003G296300 Sobic001G530350 Sobic001G530350 Sobic001G285000--Sobic001G530350 Sobic001G045000--Sobic001G321500 Sobic001G045000--Sobic005G229400 Sobic010G090900 Sobic010G090900 Sobic001G045000--Sobic010G090900 Sobic004G173500 Sobic004G173500 Sobic001G045000--Sobic004G173500 Sobic006G277200 Sobic006G277200 Sobic001G045000--Sobic006G277200 Sobic002G119800 Sobic002G119800 Sobic001G045000--Sobic002G119800 Sobic001G045000--Sobic010G009400 Sobic005G129400 Sobic005G129400 Sobic001G045000--Sobic005G129400 Sobic004G214100 Sobic004G214100 Sobic001G045000--Sobic004G214100 Sobic009G156300--Sobic002G117200 Sobic009G156300--Sobic004G352900 Sobic009G156300--Sobic001G285000 Sobic009G156300--Sobic010G066300 Sobic009G131100 Sobic009G131100 Sobic009G156300--Sobic009G131100 Sobic004G060600 Sobic004G060600 Sobic009G156300--Sobic004G060600 Sobic002G254650 Sobic002G254650 Sobic009G156300--Sobic002G254650 Sobic002G427900 Sobic002G427900 Sobic009G156300--Sobic002G427900 Sobic010G065400 Sobic010G065400 Sobic009G156300--Sobic010G065400 Sobic001G427500 Sobic001G427500 Sobic004G227300--Sobic001G427500 Sobic001G261597 Sobic001G261597 Sobic004G227300--Sobic001G261597 Sobic006G171700 Sobic006G171700 Sobic004G227300--Sobic006G171700 Sobic003G359900 Sobic003G359900 Sobic004G227300--Sobic003G359900 Sobic003G299000 Sobic003G299000 Sobic004G227300--Sobic003G299000 Sobic004G227300--Sobic004G214100 Sobic002G259400 Sobic002G259400 Sobic004G227300--Sobic002G259400 Sobic007G062500 Sobic007G062500 Sobic004G227300--Sobic007G062500 Sobic004G227300--Sobic006G119800 Sobic001G450500 Sobic001G450500 Sobic001G288100--Sobic001G450500 Sobic006G197800 Sobic006G197800 Sobic001G288100--Sobic006G197800 Sobic002G376000 Sobic002G376000 Sobic001G288100--Sobic002G376000 Sobic006G174600 Sobic006G174600 Sobic001G288100--Sobic006G174600 Sobic001G288100--Sobic005G229400 Sobic004G114500 Sobic004G114500 Sobic001G288100--Sobic004G114500 Sobic001G288100--Sobic009G100500 Sobic002G257100 Sobic002G257100 Sobic001G288100--Sobic002G257100 Sobic001G526000 Sobic001G526000 Sobic001G288100--Sobic001G526000 Sobic003G193800 Sobic003G193800 Sobic009G100500--Sobic003G193800 Sobic009G010400 Sobic009G010400 Sobic009G100500--Sobic009G010400 Sobic007G090300 Sobic007G090300 Sobic009G100500--Sobic007G090300 Sobic010G221032 Sobic010G221032 Sobic009G100500--Sobic010G221032 Sobic004G065900 Sobic004G065900 Sobic009G100500--Sobic004G065900 Sobic009G100500--Sobic001G410100 Sobic002G199500 Sobic002G199500 Sobic009G100500--Sobic002G199500 Sobic002G207300 Sobic002G207300 Sobic009G100500--Sobic002G207300 Sobic006G259000 Sobic006G259000 Sobic009G100500--Sobic006G259000 Sobic001G162100--Sobic006G225600 Sobic004G234900 Sobic004G234900 Sobic001G162100--Sobic004G234900 Sobic009G059700 Sobic009G059700 Sobic001G162100--Sobic009G059700 Sobic008G016900 Sobic008G016900 Sobic001G162100--Sobic008G016900 Sobic010G062800 Sobic010G062800 Sobic001G162100--Sobic010G062800 Sobic002G122700 Sobic002G122700 Sobic001G162100--Sobic002G122700 Sobic001G434900 Sobic001G434900 Sobic001G162100--Sobic001G434900 Sobic001G098200 Sobic001G098200 Sobic001G162100--Sobic001G098200 Sobic009G219900 Sobic009G219900 Sobic001G162100--Sobic009G219900
Octagon: transcription factors


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