Gene annotation
Transcriptome id Sobic.002G301800.1
Synonym
Functional annotation GRAS family transcription factor domain containing protein, expressed
UniProt A0A1B6QE64
Pfam PF03514
Panther DB PTHR31636:SF59 PTHR31636
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G07530 : SCARECROW-like 14
RAP-DB (Rice) LOC_Os11g47870.1 : GRAS family transcription factor domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029081 , Zm00025a029082
Brachypodium KQJ92434 , KQJ92435 , KQK10137 , KQJ86191
Barley HORVU4Hr1G027920.2 , HORVU4Hr1G027920.3 , HORVU4Hr1G027920.1 , HORVU4Hr1G027920.6 , HORVU4Hr1G027920.4 , HORVU4Hr1G027920.5 , HORVU5Hr1G063270.3 , HORVU5Hr1G063270.2 , HORVU5Hr1G063270.1
Wheat TraesCS4D02G136500 , TraesCS5D02G092000 , TraesCS5A02G080300
Populus -


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cDNA sequences
Sobic.002G301800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
2 Sobic.010G009400 G-protein alpha subunit, putative, expressed -
3 Sobic.008G090600 expressed protein -
4 Sobic.003G413500 expressed protein -
5 Sobic.009G138200 inactive receptor kinase At1g27190 precursor, putative, expressed -
6 Sobic.004G281300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
7 Sobic.004G237600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
8 Sobic.003G436300 expressed protein -
9 Sobic.002G251700 no apical meristem protein, putative, expressed -
10 Sobic.006G119800 leucine rich repeat containing protein, expressed -
11 Sobic.001G180900 secretory carrier-associated membrane protein 4, putative, expressed -
12 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
13 Sobic.006G194500 expressed protein -
14 Sobic.010G265800 tyrosine protein kinase domain containing protein, putative, expressed -
15 Sobic.001G387600 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
16 Sobic.007G007000 DUF250 domain containing protein, putative, expressed K15356: VRG4, GDP-mannose transporter
17 Sobic.006G034000 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
18 Sobic.010G089700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
19 Sobic.003G363100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialyltransferase family domain containing protein, expressed -
20 Sobic.005G129400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic002G301800 Sobic002G301800 Sobic005G229400 Sobic005G229400 Sobic002G301800--Sobic005G229400 Sobic010G009400 Sobic010G009400 Sobic002G301800--Sobic010G009400 Sobic008G090600 Sobic008G090600 Sobic002G301800--Sobic008G090600 Sobic003G413500 Sobic003G413500 Sobic002G301800--Sobic003G413500 Sobic009G138200 Sobic009G138200 Sobic002G301800--Sobic009G138200 Sobic004G281300 Sobic004G281300 Sobic002G301800--Sobic004G281300 Sobic004G237600 Sobic004G237600 Sobic002G301800--Sobic004G237600 Sobic003G436300 Sobic003G436300 Sobic002G301800--Sobic003G436300 Sobic002G251700 Sobic002G251700 Sobic002G301800--Sobic002G251700 Sobic005G229400--Sobic010G009400 Sobic005G229400--Sobic002G301800 Sobic001G285000 Sobic001G285000 Sobic005G229400--Sobic001G285000 Sobic001G045000 Sobic001G045000 Sobic005G229400--Sobic001G045000 Sobic009G156300 Sobic009G156300 Sobic005G229400--Sobic009G156300 Sobic004G227300 Sobic004G227300 Sobic005G229400--Sobic004G227300 Sobic001G288100 Sobic001G288100 Sobic005G229400--Sobic001G288100 Sobic009G100500 Sobic009G100500 Sobic005G229400--Sobic009G100500 Sobic001G162100 Sobic001G162100 Sobic005G229400--Sobic001G162100 Sobic010G009400--Sobic002G251700 Sobic010G009400--Sobic005G229400 Sobic010G009400--Sobic002G301800 Sobic010G009400--Sobic001G162100 Sobic006G225600 Sobic006G225600 Sobic010G009400--Sobic006G225600 Sobic001G387600 Sobic001G387600 Sobic010G009400--Sobic001G387600 Sobic010G009400--Sobic003G413500 Sobic010G009400--Sobic004G227300 Sobic006G119800 Sobic006G119800 Sobic010G009400--Sobic006G119800 Sobic002G378800 Sobic002G378800 Sobic008G090600--Sobic002G378800 Sobic006G034000 Sobic006G034000 Sobic008G090600--Sobic006G034000 Sobic008G090600--Sobic003G436300 Sobic005G091600 Sobic005G091600 Sobic008G090600--Sobic005G091600 Sobic008G090600--Sobic002G301800 Sobic001G180900 Sobic001G180900 Sobic008G090600--Sobic001G180900 Sobic003G116900 Sobic003G116900 Sobic008G090600--Sobic003G116900 Sobic001G363300 Sobic001G363300 Sobic008G090600--Sobic001G363300 Sobic003G321300 Sobic003G321300 Sobic008G090600--Sobic003G321300 Sobic003G413500--Sobic001G387600 Sobic010G174500 Sobic010G174500 Sobic003G413500--Sobic010G174500 Sobic001G503300 Sobic001G503300 Sobic003G413500--Sobic001G503300 Sobic004G234900 Sobic004G234900 Sobic003G413500--Sobic004G234900 Sobic009G032400 Sobic009G032400 Sobic003G413500--Sobic009G032400 Sobic003G413500--Sobic010G009400 Sobic003G413500--Sobic001G180900 Sobic010G265800 Sobic010G265800 Sobic003G413500--Sobic010G265800 Sobic001G372500 Sobic001G372500 Sobic003G413500--Sobic001G372500 Sobic010G130000 Sobic010G130000 Sobic009G138200--Sobic010G130000 Sobic002G119700 Sobic002G119700 Sobic009G138200--Sobic002G119700 Sobic009G138100 Sobic009G138100 Sobic009G138200--Sobic009G138100 Sobic001G034300 Sobic001G034300 Sobic009G138200--Sobic001G034300 Sobic009G138200--Sobic001G180900 Sobic009G138200--Sobic001G503300 Sobic002G134600 Sobic002G134600 Sobic009G138200--Sobic002G134600 Sobic009G138200--Sobic006G034000 Sobic009G138200--Sobic002G301800 Sobic010G089700 Sobic010G089700 Sobic004G281300--Sobic010G089700 Sobic006G042200 Sobic006G042200 Sobic004G281300--Sobic006G042200 Sobic009G028500 Sobic009G028500 Sobic004G281300--Sobic009G028500 Sobic004G281300--Sobic002G301800 Sobic003G403500 Sobic003G403500 Sobic004G281300--Sobic003G403500 Sobic003G422700 Sobic003G422700 Sobic004G281300--Sobic003G422700 Sobic004G281300--Sobic001G034300 Sobic004G337500 Sobic004G337500 Sobic004G281300--Sobic004G337500 Sobic001G351100 Sobic001G351100 Sobic004G281300--Sobic001G351100 Sobic001G123000 Sobic001G123000 Sobic004G237600--Sobic001G123000 Sobic004G237600--Sobic001G180900 Sobic006G176600 Sobic006G176600 Sobic004G237600--Sobic006G176600 Sobic004G237600--Sobic006G034000 Sobic006G148200 Sobic006G148200 Sobic004G237600--Sobic006G148200 Sobic004G237600--Sobic004G234900 Sobic002G361300 Sobic002G361300 Sobic004G237600--Sobic002G361300 Sobic004G237600--Sobic006G225600 Sobic001G323000 Sobic001G323000 Sobic004G237600--Sobic001G323000 Sobic003G436300--Sobic006G034000 Sobic001G085100 Sobic001G085100 Sobic003G436300--Sobic001G085100 Sobic010G020300 Sobic010G020300 Sobic003G436300--Sobic010G020300 Sobic001G057800 Sobic001G057800 Sobic003G436300--Sobic001G057800 Sobic003G436300--Sobic003G116900 Sobic003G312200 Sobic003G312200 Sobic003G436300--Sobic003G312200 Sobic003G436300--Sobic001G323000 Sobic004G348900 Sobic004G348900 Sobic003G436300--Sobic004G348900 Sobic001G296900 Sobic001G296900 Sobic003G436300--Sobic001G296900 Sobic002G251700--Sobic006G225600 Sobic003G295400 Sobic003G295400 Sobic002G251700--Sobic003G295400 Sobic002G251700--Sobic004G234900 Sobic001G098200 Sobic001G098200 Sobic002G251700--Sobic001G098200 Sobic002G251700--Sobic010G009400 Sobic003G077900 Sobic003G077900 Sobic002G251700--Sobic003G077900 Sobic003G217400 Sobic003G217400 Sobic002G251700--Sobic003G217400 Sobic007G007000 Sobic007G007000 Sobic002G251700--Sobic007G007000 Sobic010G000900 Sobic010G000900 Sobic002G251700--Sobic010G000900
Octagon: transcription factors


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