Gene annotation
Transcriptome id Sobic.003G413500.1
Synonym Sb03g044770
Functional annotation expressed protein
UniProt C5XH14
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g70470.1 : expressed protein
MaizeGDB (Corn) Zm00025a026171 , Zm00025a039213
Brachypodium -
Barley HORVU3Hr1G096850.2 , HORVU3Hr1G096850.1 , HORVU3Hr1G096850.5 , HORVU3Hr1G096850.3 , HORVU3Hr1G096850.4 , HORVU3Hr1G096850.6
Wheat TraesCS3B02G481600 , TraesCS3D02G439100 , TraesCS3A02G446500 , TraesCS3A02G446500
Populus -


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cDNA sequences
Sobic.003G413500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G387600 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
2 Sobic.010G174500 protein kinase family protein, putative, expressed -
3 Sobic.001G503300 tyrosine protein kinase domain containing protein, putative, expressed -
4 Sobic.004G234900 membrane-anchored ubiquitin-fold protein, putative, expressed -
5 Sobic.009G032400 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
6 Sobic.010G009400 G-protein alpha subunit, putative, expressed -
7 Sobic.001G180900 secretory carrier-associated membrane protein 4, putative, expressed -
8 Sobic.010G265800 tyrosine protein kinase domain containing protein, putative, expressed -
9 Sobic.001G372500 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
10 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
11 Sobic.001G253700 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
12 Sobic.002G301800 GRAS family transcription factor domain containing protein, expressed -
13 Sobic.008G074700 - -
14 Sobic.001G098200 magnesium-dependent phosphatase 1, putative, expressed K17619: magnesium-dependent phosphatase 1
15 Sobic.010G196500 zinc-binding protein, putative, expressed -
16 Sobic.003G086900 C2 domain containing protein, putative, expressed -
17 Sobic.002G130800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
18 Sobic.002G273700 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
19 Sobic.009G138200 inactive receptor kinase At1g27190 precursor, putative, expressed -
20 Sobic.004G233200 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor


Gene co-expression network
sample Sobic003G413500 Sobic003G413500 Sobic001G387600 Sobic001G387600 Sobic003G413500--Sobic001G387600 Sobic010G174500 Sobic010G174500 Sobic003G413500--Sobic010G174500 Sobic001G503300 Sobic001G503300 Sobic003G413500--Sobic001G503300 Sobic004G234900 Sobic004G234900 Sobic003G413500--Sobic004G234900 Sobic009G032400 Sobic009G032400 Sobic003G413500--Sobic009G032400 Sobic010G009400 Sobic010G009400 Sobic003G413500--Sobic010G009400 Sobic001G180900 Sobic001G180900 Sobic003G413500--Sobic001G180900 Sobic010G265800 Sobic010G265800 Sobic003G413500--Sobic010G265800 Sobic001G372500 Sobic001G372500 Sobic003G413500--Sobic001G372500 Sobic003G309900 Sobic003G309900 Sobic001G387600--Sobic003G309900 Sobic006G119800 Sobic006G119800 Sobic001G387600--Sobic006G119800 Sobic001G387600--Sobic003G413500 Sobic009G233300 Sobic009G233300 Sobic001G387600--Sobic009G233300 Sobic001G191600 Sobic001G191600 Sobic001G387600--Sobic001G191600 Sobic008G146900 Sobic008G146900 Sobic001G387600--Sobic008G146900 Sobic001G222250 Sobic001G222250 Sobic001G387600--Sobic001G222250 Sobic001G253700 Sobic001G253700 Sobic001G387600--Sobic001G253700 Sobic001G387600--Sobic010G009400 Sobic010G174500--Sobic004G234900 Sobic010G174500--Sobic003G413500 Sobic010G174500--Sobic001G503300 Sobic006G092400 Sobic006G092400 Sobic010G174500--Sobic006G092400 Sobic006G225600 Sobic006G225600 Sobic010G174500--Sobic006G225600 Sobic002G130800 Sobic002G130800 Sobic010G174500--Sobic002G130800 Sobic005G105000 Sobic005G105000 Sobic010G174500--Sobic005G105000 Sobic010G174500--Sobic001G180900 Sobic009G138100 Sobic009G138100 Sobic010G174500--Sobic009G138100 Sobic001G503300--Sobic010G174500 Sobic001G503300--Sobic004G234900 Sobic001G098200 Sobic001G098200 Sobic001G503300--Sobic001G098200 Sobic006G209400 Sobic006G209400 Sobic001G503300--Sobic006G209400 Sobic001G503300--Sobic003G413500 Sobic001G516100 Sobic001G516100 Sobic001G503300--Sobic001G516100 Sobic001G414500 Sobic001G414500 Sobic001G503300--Sobic001G414500 Sobic001G503300--Sobic006G092400 Sobic003G044200 Sobic003G044200 Sobic001G503300--Sobic003G044200 Sobic004G234900--Sobic001G098200 Sobic004G234900--Sobic006G225600 Sobic002G122700 Sobic002G122700 Sobic004G234900--Sobic002G122700 Sobic001G162100 Sobic001G162100 Sobic004G234900--Sobic001G162100 Sobic002G251700 Sobic002G251700 Sobic004G234900--Sobic002G251700 Sobic004G234900--Sobic010G174500 Sobic006G254800 Sobic006G254800 Sobic004G234900--Sobic006G254800 Sobic004G234900--Sobic001G180900 Sobic010G000900 Sobic010G000900 Sobic004G234900--Sobic010G000900 Sobic009G032400--Sobic003G413500 Sobic009G032400--Sobic001G387600 Sobic002G431600 Sobic002G431600 Sobic009G032400--Sobic002G431600 Sobic003G076500 Sobic003G076500 Sobic009G032400--Sobic003G076500 Sobic001G351100 Sobic001G351100 Sobic009G032400--Sobic001G351100 Sobic002G073900 Sobic002G073900 Sobic009G032400--Sobic002G073900 Sobic010G089700 Sobic010G089700 Sobic009G032400--Sobic010G089700 Sobic009G032400--Sobic010G009400 Sobic009G138200 Sobic009G138200 Sobic009G032400--Sobic009G138200 Sobic010G009400--Sobic002G251700 Sobic005G229400 Sobic005G229400 Sobic010G009400--Sobic005G229400 Sobic002G301800 Sobic002G301800 Sobic010G009400--Sobic002G301800 Sobic010G009400--Sobic001G162100 Sobic010G009400--Sobic006G225600 Sobic010G009400--Sobic001G387600 Sobic010G009400--Sobic003G413500 Sobic004G227300 Sobic004G227300 Sobic010G009400--Sobic004G227300 Sobic010G009400--Sobic006G119800 Sobic006G034000 Sobic006G034000 Sobic001G180900--Sobic006G034000 Sobic001G180900--Sobic004G234900 Sobic002G378800 Sobic002G378800 Sobic001G180900--Sobic002G378800 Sobic009G079300 Sobic009G079300 Sobic001G180900--Sobic009G079300 Sobic009G126900 Sobic009G126900 Sobic001G180900--Sobic009G126900 Sobic004G274400 Sobic004G274400 Sobic001G180900--Sobic004G274400 Sobic001G180900--Sobic006G225600 Sobic008G110600 Sobic008G110600 Sobic001G180900--Sobic008G110600 Sobic003G126300 Sobic003G126300 Sobic001G180900--Sobic003G126300 Sobic006G004600 Sobic006G004600 Sobic010G265800--Sobic006G004600 Sobic010G265800--Sobic003G413500 Sobic003G314500 Sobic003G314500 Sobic010G265800--Sobic003G314500 Sobic003G308700 Sobic003G308700 Sobic010G265800--Sobic003G308700 Sobic009G148900 Sobic009G148900 Sobic010G265800--Sobic009G148900 Sobic010G265800--Sobic001G387600 Sobic009G057700 Sobic009G057700 Sobic010G265800--Sobic009G057700 Sobic001G427500 Sobic001G427500 Sobic010G265800--Sobic001G427500 Sobic010G245100 Sobic010G245100 Sobic010G265800--Sobic010G245100 Sobic001G372500--Sobic009G233300 Sobic007G120401 Sobic007G120401 Sobic001G372500--Sobic007G120401 Sobic001G372500--Sobic003G413500 Sobic009G137800 Sobic009G137800 Sobic001G372500--Sobic009G137800 Sobic001G372500--Sobic001G387600 Sobic007G189500 Sobic007G189500 Sobic001G372500--Sobic007G189500 Sobic006G273200 Sobic006G273200 Sobic001G372500--Sobic006G273200 Sobic001G372500--Sobic003G309900 Sobic006G194500 Sobic006G194500 Sobic001G372500--Sobic006G194500
Octagon: transcription factors


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