Gene annotation
Transcriptome id Sobic.009G032400.1
Synonym Sb09g002720
Functional annotation protein phosphatase 2C, putative, expressed
UniProt C5YZI2
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF165
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology K14803; protein phosphatase PTC2/3
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT3G62260 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os05g04360.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a055303
Brachypodium KQK07961 , KQK04043 , KQK04044
Barley HORVU1Hr1G016640.2 , HORVU1Hr1G016640.3 , HORVU1Hr1G016640.1 , HORVU1Hr1G016640.6 , HORVU1Hr1G016640.7 , HORVU1Hr1G016640.4 , HORVU1Hr1G016640.5 , HORVU5Hr1G020300.8 , HORVU5Hr1G020300.6 , HORVU5Hr1G020300.7 , HORVU5Hr1G020300.4 , HORVU5Hr1G020300.5 , HORVU5Hr1G020300.2 , HORVU5Hr1G020300.3 , HORVU5Hr1G020300.1
Wheat TraesCS1B02G095600 , TraesCS1D02G079600 , TraesCS5B02G082500 , TraesCS1A02G077500 , TraesCS5A02G076600
Populus -


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cDNA sequences
Sobic.009G032400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G413500 expressed protein -
2 Sobic.001G387600 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
3 Sobic.002G431600 protein kinase APK1B, chloroplast precursor, putative, expressed -
4 Sobic.003G076500 MYB family transcription factor, putative, expressed -
5 Sobic.001G351100 LOL3, putative, expressed -
6 Sobic.002G073900 expressed protein -
7 Sobic.010G089700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
8 Sobic.010G009400 G-protein alpha subunit, putative, expressed -
9 Sobic.009G138200 inactive receptor kinase At1g27190 precursor, putative, expressed -
10 Sobic.001G162100 WRKY94, expressed -
11 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
12 Sobic.001G414500 ankyrin repeat-containing protein, putative, expressed -
13 Sobic.004G131900 - -
14 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
15 Sobic.002G119700 ankyrin repeat domain containing protein, expressed -
16 Sobic.003G112800 T-complex protein, putative, expressed K09494: T-complex protein 1 subunit beta
17 Sobic.007G105400 ubiquitin-conjugating enzyme, putative, expressed K10579: UBE2M, ubiquitin-conjugating enzyme E2 M
18 Sobic.001G417900 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
19 Sobic.002G301800 GRAS family transcription factor domain containing protein, expressed -
20 Sobic.006G092400 calmodulin binding protein, putative, expressed -


Gene co-expression network
sample Sobic009G032400 Sobic009G032400 Sobic003G413500 Sobic003G413500 Sobic009G032400--Sobic003G413500 Sobic001G387600 Sobic001G387600 Sobic009G032400--Sobic001G387600 Sobic002G431600 Sobic002G431600 Sobic009G032400--Sobic002G431600 Sobic003G076500 Sobic003G076500 Sobic009G032400--Sobic003G076500 Sobic001G351100 Sobic001G351100 Sobic009G032400--Sobic001G351100 Sobic002G073900 Sobic002G073900 Sobic009G032400--Sobic002G073900 Sobic010G089700 Sobic010G089700 Sobic009G032400--Sobic010G089700 Sobic010G009400 Sobic010G009400 Sobic009G032400--Sobic010G009400 Sobic009G138200 Sobic009G138200 Sobic009G032400--Sobic009G138200 Sobic003G413500--Sobic001G387600 Sobic010G174500 Sobic010G174500 Sobic003G413500--Sobic010G174500 Sobic001G503300 Sobic001G503300 Sobic003G413500--Sobic001G503300 Sobic004G234900 Sobic004G234900 Sobic003G413500--Sobic004G234900 Sobic003G413500--Sobic009G032400 Sobic003G413500--Sobic010G009400 Sobic001G180900 Sobic001G180900 Sobic003G413500--Sobic001G180900 Sobic010G265800 Sobic010G265800 Sobic003G413500--Sobic010G265800 Sobic001G372500 Sobic001G372500 Sobic003G413500--Sobic001G372500 Sobic003G309900 Sobic003G309900 Sobic001G387600--Sobic003G309900 Sobic006G119800 Sobic006G119800 Sobic001G387600--Sobic006G119800 Sobic001G387600--Sobic003G413500 Sobic009G233300 Sobic009G233300 Sobic001G387600--Sobic009G233300 Sobic001G191600 Sobic001G191600 Sobic001G387600--Sobic001G191600 Sobic008G146900 Sobic008G146900 Sobic001G387600--Sobic008G146900 Sobic001G222250 Sobic001G222250 Sobic001G387600--Sobic001G222250 Sobic001G253700 Sobic001G253700 Sobic001G387600--Sobic001G253700 Sobic001G387600--Sobic010G009400 Sobic001G417900 Sobic001G417900 Sobic002G431600--Sobic001G417900 Sobic009G219900 Sobic009G219900 Sobic002G431600--Sobic009G219900 Sobic004G301900 Sobic004G301900 Sobic002G431600--Sobic004G301900 Sobic010G130000 Sobic010G130000 Sobic002G431600--Sobic010G130000 Sobic006G033200 Sobic006G033200 Sobic002G431600--Sobic006G033200 Sobic003G077900 Sobic003G077900 Sobic002G431600--Sobic003G077900 Sobic002G431600--Sobic006G119800 Sobic004G060600 Sobic004G060600 Sobic002G431600--Sobic004G060600 Sobic006G054500 Sobic006G054500 Sobic002G431600--Sobic006G054500 Sobic002G290400 Sobic002G290400 Sobic003G076500--Sobic002G290400 Sobic006G209400 Sobic006G209400 Sobic003G076500--Sobic006G209400 Sobic006G092400 Sobic006G092400 Sobic003G076500--Sobic006G092400 Sobic001G162100 Sobic001G162100 Sobic003G076500--Sobic001G162100 Sobic003G076500--Sobic010G130000 Sobic001G541100 Sobic001G541100 Sobic003G076500--Sobic001G541100 Sobic003G309200 Sobic003G309200 Sobic003G076500--Sobic003G309200 Sobic003G076500--Sobic009G219900 Sobic001G031600 Sobic001G031600 Sobic003G076500--Sobic001G031600 Sobic005G072200 Sobic005G072200 Sobic001G351100--Sobic005G072200 Sobic003G422700 Sobic003G422700 Sobic001G351100--Sobic003G422700 Sobic006G042200 Sobic006G042200 Sobic001G351100--Sobic006G042200 Sobic004G251300 Sobic004G251300 Sobic001G351100--Sobic004G251300 Sobic004G340800 Sobic004G340800 Sobic001G351100--Sobic004G340800 Sobic002G137800 Sobic002G137800 Sobic001G351100--Sobic002G137800 Sobic001G351100--Sobic002G073900 Sobic003G403500 Sobic003G403500 Sobic001G351100--Sobic003G403500 Sobic007G054100 Sobic007G054100 Sobic001G351100--Sobic007G054100 Sobic003G308700 Sobic003G308700 Sobic002G073900--Sobic003G308700 Sobic002G073900--Sobic005G072200 Sobic002G073900--Sobic006G042200 Sobic002G073900--Sobic007G054100 Sobic001G261597 Sobic001G261597 Sobic002G073900--Sobic001G261597 Sobic004G092000 Sobic004G092000 Sobic002G073900--Sobic004G092000 Sobic009G008100 Sobic009G008100 Sobic002G073900--Sobic009G008100 Sobic004G227300 Sobic004G227300 Sobic002G073900--Sobic004G227300 Sobic002G073900--Sobic010G009400 Sobic009G028500 Sobic009G028500 Sobic010G089700--Sobic009G028500 Sobic004G281300 Sobic004G281300 Sobic010G089700--Sobic004G281300 Sobic004G006500 Sobic004G006500 Sobic010G089700--Sobic004G006500 Sobic010G089700--Sobic004G092000 Sobic010G089700--Sobic009G032400 Sobic010G089700--Sobic002G137800 Sobic002G418900 Sobic002G418900 Sobic010G089700--Sobic002G418900 Sobic001G095750 Sobic001G095750 Sobic010G089700--Sobic001G095750 Sobic007G124100 Sobic007G124100 Sobic010G089700--Sobic007G124100 Sobic002G251700 Sobic002G251700 Sobic010G009400--Sobic002G251700 Sobic005G229400 Sobic005G229400 Sobic010G009400--Sobic005G229400 Sobic002G301800 Sobic002G301800 Sobic010G009400--Sobic002G301800 Sobic010G009400--Sobic001G162100 Sobic006G225600 Sobic006G225600 Sobic010G009400--Sobic006G225600 Sobic010G009400--Sobic001G387600 Sobic010G009400--Sobic003G413500 Sobic010G009400--Sobic004G227300 Sobic010G009400--Sobic006G119800 Sobic009G138200--Sobic010G130000 Sobic002G119700 Sobic002G119700 Sobic009G138200--Sobic002G119700 Sobic009G138100 Sobic009G138100 Sobic009G138200--Sobic009G138100 Sobic001G034300 Sobic001G034300 Sobic009G138200--Sobic001G034300 Sobic009G138200--Sobic001G180900 Sobic009G138200--Sobic001G503300 Sobic002G134600 Sobic002G134600 Sobic009G138200--Sobic002G134600 Sobic006G034000 Sobic006G034000 Sobic009G138200--Sobic006G034000 Sobic009G138200--Sobic002G301800
Octagon: transcription factors


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