Gene annotation
Transcriptome id Sobic.003G076500.2,Sobic.003G076500.1
Synonym
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A1B6Q1W4
Pfam PF00249
Panther DB PTHR24078 PTHR24078:SF279
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38090 : Duplicated homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os01g04930.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a023494 , Zm00025a035599 , Zm00025a035598
Brachypodium -
Barley -
Wheat TraesCS3D02G056100 , TraesCS3B02G068800 , TraesCS3A02G056000 , TraesCS1D02G278200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G290400 Protein kinase superfamily protein(PubMedID : 26465154)@serine/threonine-protein kinase SRPK1, putative, expressed -
2 Sobic.006G209400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
3 Sobic.006G092400 calmodulin binding protein, putative, expressed -
4 Sobic.001G162100 WRKY94, expressed -
5 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
6 Sobic.001G541100 signal recognition particle receptor, putative, expressed K13431: signal recognition particle receptor subunit alpha
7 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
8 Sobic.009G219900 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
9 Sobic.001G031600 calmodulin binding protein, putative, expressed -
10 Sobic.006G225600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
11 Sobic.003G002400 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
12 Sobic.004G350300 No apical meristem protein, putative, expressed -
13 Sobic.001G414500 ankyrin repeat-containing protein, putative, expressed -
14 Sobic.010G174500 protein kinase family protein, putative, expressed -
15 Sobic.003G050600 expressed protein -
16 Sobic.004G274400 GCN5-related N-acetyltransferase, putative, expressed -
17 Sobic.001G328200 interferon-related developmental regulator, putative, expressed -
18 Sobic.001G516100 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
19 Sobic.006G090000 DUF1771 domain containing protein, putative, expressed -
20 Sobic.004G234900 membrane-anchored ubiquitin-fold protein, putative, expressed -


Gene co-expression network
sample Sobic003G076500 Sobic003G076500 Sobic002G290400 Sobic002G290400 Sobic003G076500--Sobic002G290400 Sobic006G209400 Sobic006G209400 Sobic003G076500--Sobic006G209400 Sobic006G092400 Sobic006G092400 Sobic003G076500--Sobic006G092400 Sobic001G162100 Sobic001G162100 Sobic003G076500--Sobic001G162100 Sobic010G130000 Sobic010G130000 Sobic003G076500--Sobic010G130000 Sobic001G541100 Sobic001G541100 Sobic003G076500--Sobic001G541100 Sobic003G309200 Sobic003G309200 Sobic003G076500--Sobic003G309200 Sobic009G219900 Sobic009G219900 Sobic003G076500--Sobic009G219900 Sobic001G031600 Sobic001G031600 Sobic003G076500--Sobic001G031600 Sobic002G290400--Sobic006G209400 Sobic002G290400--Sobic003G076500 Sobic010G251300 Sobic010G251300 Sobic002G290400--Sobic010G251300 Sobic002G290400--Sobic003G309200 Sobic001G414500 Sobic001G414500 Sobic002G290400--Sobic001G414500 Sobic008G089900 Sobic008G089900 Sobic002G290400--Sobic008G089900 Sobic002G290400--Sobic006G092400 Sobic004G118200 Sobic004G118200 Sobic002G290400--Sobic004G118200 Sobic010G230500 Sobic010G230500 Sobic002G290400--Sobic010G230500 Sobic006G209400--Sobic006G092400 Sobic003G295900 Sobic003G295900 Sobic006G209400--Sobic003G295900 Sobic006G209400--Sobic002G290400 Sobic006G209400--Sobic001G541100 Sobic006G209400--Sobic001G031600 Sobic009G165800 Sobic009G165800 Sobic006G209400--Sobic009G165800 Sobic001G395400 Sobic001G395400 Sobic006G209400--Sobic001G395400 Sobic006G209400--Sobic003G076500 Sobic010G116400 Sobic010G116400 Sobic006G209400--Sobic010G116400 Sobic007G179800 Sobic007G179800 Sobic006G092400--Sobic007G179800 Sobic002G130800 Sobic002G130800 Sobic006G092400--Sobic002G130800 Sobic006G092400--Sobic006G209400 Sobic010G074300 Sobic010G074300 Sobic006G092400--Sobic010G074300 Sobic004G235000 Sobic004G235000 Sobic006G092400--Sobic004G235000 Sobic001G508100 Sobic001G508100 Sobic006G092400--Sobic001G508100 Sobic003G220800 Sobic003G220800 Sobic006G092400--Sobic003G220800 Sobic006G090000 Sobic006G090000 Sobic006G092400--Sobic006G090000 Sobic010G147100 Sobic010G147100 Sobic006G092400--Sobic010G147100 Sobic006G225600 Sobic006G225600 Sobic001G162100--Sobic006G225600 Sobic004G234900 Sobic004G234900 Sobic001G162100--Sobic004G234900 Sobic009G059700 Sobic009G059700 Sobic001G162100--Sobic009G059700 Sobic008G016900 Sobic008G016900 Sobic001G162100--Sobic008G016900 Sobic010G062800 Sobic010G062800 Sobic001G162100--Sobic010G062800 Sobic002G122700 Sobic002G122700 Sobic001G162100--Sobic002G122700 Sobic001G434900 Sobic001G434900 Sobic001G162100--Sobic001G434900 Sobic001G098200 Sobic001G098200 Sobic001G162100--Sobic001G098200 Sobic001G162100--Sobic009G219900 Sobic006G033200 Sobic006G033200 Sobic010G130000--Sobic006G033200 Sobic010G278200 Sobic010G278200 Sobic010G130000--Sobic010G278200 Sobic009G138100 Sobic009G138100 Sobic010G130000--Sobic009G138100 Sobic006G034000 Sobic006G034000 Sobic010G130000--Sobic006G034000 Sobic003G312200 Sobic003G312200 Sobic010G130000--Sobic003G312200 Sobic001G124200 Sobic001G124200 Sobic010G130000--Sobic001G124200 Sobic001G390800 Sobic001G390800 Sobic010G130000--Sobic001G390800 Sobic001G085100 Sobic001G085100 Sobic010G130000--Sobic001G085100 Sobic008G124900 Sobic008G124900 Sobic010G130000--Sobic008G124900 Sobic009G219000 Sobic009G219000 Sobic001G541100--Sobic009G219000 Sobic001G323000 Sobic001G323000 Sobic001G541100--Sobic001G323000 Sobic001G541100--Sobic009G219900 Sobic001G541100--Sobic009G138100 Sobic001G541100--Sobic006G209400 Sobic001G541100--Sobic001G395400 Sobic001G541100--Sobic010G130000 Sobic001G105500 Sobic001G105500 Sobic001G541100--Sobic001G105500 Sobic002G134600 Sobic002G134600 Sobic001G541100--Sobic002G134600 Sobic010G223700 Sobic010G223700 Sobic003G309200--Sobic010G223700 Sobic003G309200--Sobic002G134600 Sobic001G262700 Sobic001G262700 Sobic003G309200--Sobic001G262700 Sobic003G309200--Sobic008G124900 Sobic003G221900 Sobic003G221900 Sobic003G309200--Sobic003G221900 Sobic003G309200--Sobic006G033200 Sobic002G383600 Sobic002G383600 Sobic003G309200--Sobic002G383600 Sobic003G309200--Sobic010G130000 Sobic001G389100 Sobic001G389100 Sobic003G309200--Sobic001G389100 Sobic010G188100 Sobic010G188100 Sobic009G219900--Sobic010G188100 Sobic001G220400 Sobic001G220400 Sobic009G219900--Sobic001G220400 Sobic003G077900 Sobic003G077900 Sobic009G219900--Sobic003G077900 Sobic009G219900--Sobic001G541100 Sobic001G328200 Sobic001G328200 Sobic009G219900--Sobic001G328200 Sobic009G219900--Sobic006G225600 Sobic010G101500 Sobic010G101500 Sobic009G219900--Sobic010G101500 Sobic009G219900--Sobic001G414500 Sobic002G431600 Sobic002G431600 Sobic009G219900--Sobic002G431600 Sobic001G031600--Sobic001G105500 Sobic002G413000 Sobic002G413000 Sobic001G031600--Sobic002G413000 Sobic001G031600--Sobic006G209400 Sobic009G193400 Sobic009G193400 Sobic001G031600--Sobic009G193400 Sobic003G002400 Sobic003G002400 Sobic001G031600--Sobic003G002400 Sobic001G031600--Sobic003G309200 Sobic007G019800 Sobic007G019800 Sobic001G031600--Sobic007G019800 Sobic004G031600 Sobic004G031600 Sobic001G031600--Sobic004G031600 Sobic001G031600--Sobic001G541100
Octagon: transcription factors


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