Gene annotation
Transcriptome id Sobic.001G031600.1
Synonym Sb01g002950
Functional annotation calmodulin binding protein, putative, expressed
UniProt C5WUY6
Pfam PF07887
Panther DB PTHR31713 PTHR31713:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress GO:0005516calmodulin binding


Orthologs (automatic annotation)
TAIR AT4G25800 : Calmodulin-binding protein
RAP-DB (Rice) LOC_Os03g32160.1 : calmodulin binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a016409 , Zm00025a008848
Brachypodium -
Barley HORVU5Hr1G114650.12 , HORVU5Hr1G114650.13 , HORVU5Hr1G114650.10 , HORVU5Hr1G114650.11 , HORVU5Hr1G114650.14 , HORVU5Hr1G114650.15 , HORVU5Hr1G114650.8 , HORVU5Hr1G114650.9 , HORVU5Hr1G114650.1 , HORVU5Hr1G114650.2 , HORVU5Hr1G114650.3 , HORVU5Hr1G114650.4 , HORVU5Hr1G114650.5 , HORVU5Hr1G114650.6 , HORVU5Hr1G114650.7
Wheat TraesCS5A02G486100 , TraesCS5A02G486100 , TraesCS5B02G499900 , TraesCS5B02G499900 , TraesCS5B02G499900
Populus -


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cDNA sequences
Sobic.001G031600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G105500 heat shock protein DnaJ, putative, expressed -
2 Sobic.002G413000 AAA-type ATPase family protein, putative, expressed -
3 Sobic.006G209400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
4 Sobic.009G193400 AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
5 Sobic.003G002400 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
6 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
7 Sobic.007G019800 expressed protein -
8 Sobic.004G031600 cyclin-T1-1, putative, expressed K15188: cyclin T
9 Sobic.001G541100 signal recognition particle receptor, putative, expressed K13431: signal recognition particle receptor subunit alpha
10 Sobic.003G076500 MYB family transcription factor, putative, expressed -
11 Sobic.006G225600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
12 Sobic.003G131400 heat shock protein DnaJ, putative, expressed -
13 Sobic.006G092400 calmodulin binding protein, putative, expressed -
14 Sobic.009G219900 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
15 Sobic.006G033200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
16 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
17 Sobic.001G328200 interferon-related developmental regulator, putative, expressed -
18 Sobic.008G124900 heat shock protein DnaJ, putative, expressed -
19 Sobic.010G188100 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
20 Sobic.004G117900 expressed protein -


Gene co-expression network
sample Sobic001G031600 Sobic001G031600 Sobic001G105500 Sobic001G105500 Sobic001G031600--Sobic001G105500 Sobic002G413000 Sobic002G413000 Sobic001G031600--Sobic002G413000 Sobic006G209400 Sobic006G209400 Sobic001G031600--Sobic006G209400 Sobic009G193400 Sobic009G193400 Sobic001G031600--Sobic009G193400 Sobic003G002400 Sobic003G002400 Sobic001G031600--Sobic003G002400 Sobic003G309200 Sobic003G309200 Sobic001G031600--Sobic003G309200 Sobic007G019800 Sobic007G019800 Sobic001G031600--Sobic007G019800 Sobic004G031600 Sobic004G031600 Sobic001G031600--Sobic004G031600 Sobic001G541100 Sobic001G541100 Sobic001G031600--Sobic001G541100 Sobic001G105500--Sobic001G031600 Sobic009G219000 Sobic009G219000 Sobic001G105500--Sobic009G219000 Sobic001G105500--Sobic009G193400 Sobic002G040700 Sobic002G040700 Sobic001G105500--Sobic002G040700 Sobic001G391600 Sobic001G391600 Sobic001G105500--Sobic001G391600 Sobic001G105500--Sobic001G541100 Sobic006G225600 Sobic006G225600 Sobic001G105500--Sobic006G225600 Sobic009G050700 Sobic009G050700 Sobic001G105500--Sobic009G050700 Sobic001G323000 Sobic001G323000 Sobic001G105500--Sobic001G323000 Sobic010G052800 Sobic010G052800 Sobic002G413000--Sobic010G052800 Sobic002G413000--Sobic009G193400 Sobic004G293700 Sobic004G293700 Sobic002G413000--Sobic004G293700 Sobic003G220600 Sobic003G220600 Sobic002G413000--Sobic003G220600 Sobic002G413000--Sobic001G031600 Sobic007G059900 Sobic007G059900 Sobic002G413000--Sobic007G059900 Sobic004G079100 Sobic004G079100 Sobic002G413000--Sobic004G079100 Sobic002G413000--Sobic003G002400 Sobic001G329100 Sobic001G329100 Sobic002G413000--Sobic001G329100 Sobic006G092400 Sobic006G092400 Sobic006G209400--Sobic006G092400 Sobic003G295900 Sobic003G295900 Sobic006G209400--Sobic003G295900 Sobic002G290400 Sobic002G290400 Sobic006G209400--Sobic002G290400 Sobic006G209400--Sobic001G541100 Sobic006G209400--Sobic001G031600 Sobic009G165800 Sobic009G165800 Sobic006G209400--Sobic009G165800 Sobic001G395400 Sobic001G395400 Sobic006G209400--Sobic001G395400 Sobic003G076500 Sobic003G076500 Sobic006G209400--Sobic003G076500 Sobic010G116400 Sobic010G116400 Sobic006G209400--Sobic010G116400 Sobic003G007500 Sobic003G007500 Sobic009G193400--Sobic003G007500 Sobic003G433100 Sobic003G433100 Sobic009G193400--Sobic003G433100 Sobic009G171700 Sobic009G171700 Sobic009G193400--Sobic009G171700 Sobic008G180900 Sobic008G180900 Sobic009G193400--Sobic008G180900 Sobic003G295400 Sobic003G295400 Sobic009G193400--Sobic003G295400 Sobic004G104900 Sobic004G104900 Sobic009G193400--Sobic004G104900 Sobic001G478300 Sobic001G478300 Sobic009G193400--Sobic001G478300 Sobic009G193400--Sobic002G413000 Sobic010G083700 Sobic010G083700 Sobic009G193400--Sobic010G083700 Sobic004G350300 Sobic004G350300 Sobic003G002400--Sobic004G350300 Sobic004G274400 Sobic004G274400 Sobic003G002400--Sobic004G274400 Sobic001G434900 Sobic001G434900 Sobic003G002400--Sobic001G434900 Sobic002G045300 Sobic002G045300 Sobic003G002400--Sobic002G045300 Sobic003G002400--Sobic003G220600 Sobic004G271700 Sobic004G271700 Sobic003G002400--Sobic004G271700 Sobic001G122500 Sobic001G122500 Sobic003G002400--Sobic001G122500 Sobic006G033200 Sobic006G033200 Sobic003G002400--Sobic006G033200 Sobic010G101500 Sobic010G101500 Sobic003G002400--Sobic010G101500 Sobic010G223700 Sobic010G223700 Sobic003G309200--Sobic010G223700 Sobic002G134600 Sobic002G134600 Sobic003G309200--Sobic002G134600 Sobic001G262700 Sobic001G262700 Sobic003G309200--Sobic001G262700 Sobic008G124900 Sobic008G124900 Sobic003G309200--Sobic008G124900 Sobic003G221900 Sobic003G221900 Sobic003G309200--Sobic003G221900 Sobic003G309200--Sobic006G033200 Sobic002G383600 Sobic002G383600 Sobic003G309200--Sobic002G383600 Sobic010G130000 Sobic010G130000 Sobic003G309200--Sobic010G130000 Sobic001G389100 Sobic001G389100 Sobic003G309200--Sobic001G389100 Sobic004G121100 Sobic004G121100 Sobic007G019800--Sobic004G121100 Sobic001G472600 Sobic001G472600 Sobic007G019800--Sobic001G472600 Sobic004G059000 Sobic004G059000 Sobic007G019800--Sobic004G059000 Sobic007G019800--Sobic009G193400 Sobic002G113900 Sobic002G113900 Sobic007G019800--Sobic002G113900 Sobic004G117900 Sobic004G117900 Sobic007G019800--Sobic004G117900 Sobic002G350300 Sobic002G350300 Sobic007G019800--Sobic002G350300 Sobic004G301900 Sobic004G301900 Sobic007G019800--Sobic004G301900 Sobic007G019800--Sobic009G165800 Sobic001G516100 Sobic001G516100 Sobic004G031600--Sobic001G516100 Sobic004G031600--Sobic010G052800 Sobic002G330300 Sobic002G330300 Sobic004G031600--Sobic002G330300 Sobic009G231200 Sobic009G231200 Sobic004G031600--Sobic009G231200 Sobic003G407200 Sobic003G407200 Sobic004G031600--Sobic003G407200 Sobic004G031600--Sobic001G031600 Sobic003G119800 Sobic003G119800 Sobic004G031600--Sobic003G119800 Sobic007G169200 Sobic007G169200 Sobic004G031600--Sobic007G169200 Sobic001G463000 Sobic001G463000 Sobic004G031600--Sobic001G463000 Sobic001G541100--Sobic009G219000 Sobic001G541100--Sobic001G323000 Sobic009G219900 Sobic009G219900 Sobic001G541100--Sobic009G219900 Sobic009G138100 Sobic009G138100 Sobic001G541100--Sobic009G138100 Sobic001G541100--Sobic006G209400 Sobic001G541100--Sobic001G395400 Sobic001G541100--Sobic010G130000 Sobic001G541100--Sobic001G105500 Sobic001G541100--Sobic002G134600
Octagon: transcription factors


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