Gene annotation
Transcriptome id Sobic.004G117900.3,Sobic.004G117900.1,Sobic.004G117900.2,Sobic.004G117900.4
Synonym Sb04g009824
Functional annotation expressed protein
UniProt A0A1Z5RMQ7 , A0A194YP57 , A0A1Z5RLY4 , A0A1Z5RLZ1
Pfam -
Panther DB PTHR36723 PTHR36723:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64050 : -
RAP-DB (Rice) LOC_Os02g16600.1 : expressed protein
MaizeGDB (Corn) Zm00025a019868 , Zm00025a034400
Brachypodium KQJ94318 , KQJ94317 , KQJ94316
Barley HORVU3Hr1G029790.3 , HORVU3Hr1G029790.1 , HORVU3Hr1G029790.2 , HORVU3Hr1G029790.4
Wheat TraesCS3A02G146400 , TraesCS3A02G146400 , TraesCS3B02G173500 , TraesCS3B02G173500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G248200 NLI interacting factor-like phosphatase, putative, expressed -
2 Sobic.002G350300 gamma response I protein, putative, expressed K13096: splicing factor 4
3 Sobic.003G131400 heat shock protein DnaJ, putative, expressed -
4 Sobic.007G019800 expressed protein -
5 Sobic.002G262600 protein kinase, putative, expressed K13436: pto-interacting protein 1
6 Sobic.001G512700 myb/SANT domain protein, putative, expressed -
7 Sobic.002G297200 ZOS9-19 - C2H2 zinc finger protein, expressed -
8 Sobic.010G240900 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
9 Sobic.010G223700 MYB transcription factor, putative, expressed -
10 Sobic.001G356600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
11 Sobic.003G029700 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
12 Sobic.001G297500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
13 Sobic.009G193400 AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
14 Sobic.007G104800 expressed protein -
15 Sobic.010G025300 expressed protein -
16 Sobic.009G056800 growth inhibition and differentiation-related protein 88, putative, expressed -
17 Sobic.009G179700 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
18 Sobic.007G158300 phosphoglycerate mutase, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
19 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
20 Sobic.008G179700 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein


Gene co-expression network
sample Sobic004G117900 Sobic004G117900 Sobic003G248200 Sobic003G248200 Sobic004G117900--Sobic003G248200 Sobic002G350300 Sobic002G350300 Sobic004G117900--Sobic002G350300 Sobic003G131400 Sobic003G131400 Sobic004G117900--Sobic003G131400 Sobic007G019800 Sobic007G019800 Sobic004G117900--Sobic007G019800 Sobic002G262600 Sobic002G262600 Sobic004G117900--Sobic002G262600 Sobic001G512700 Sobic001G512700 Sobic004G117900--Sobic001G512700 Sobic002G297200 Sobic002G297200 Sobic004G117900--Sobic002G297200 Sobic010G240900 Sobic010G240900 Sobic004G117900--Sobic010G240900 Sobic010G223700 Sobic010G223700 Sobic004G117900--Sobic010G223700 Sobic003G248200--Sobic001G512700 Sobic001G356600 Sobic001G356600 Sobic003G248200--Sobic001G356600 Sobic008G179700 Sobic008G179700 Sobic003G248200--Sobic008G179700 Sobic004G066200 Sobic004G066200 Sobic003G248200--Sobic004G066200 Sobic008G047800 Sobic008G047800 Sobic003G248200--Sobic008G047800 Sobic006G200600 Sobic006G200600 Sobic003G248200--Sobic006G200600 Sobic003G081000 Sobic003G081000 Sobic003G248200--Sobic003G081000 Sobic004G274200 Sobic004G274200 Sobic003G248200--Sobic004G274200 Sobic003G248200--Sobic002G297200 Sobic002G350300--Sobic008G179700 Sobic009G205200 Sobic009G205200 Sobic002G350300--Sobic009G205200 Sobic009G179700 Sobic009G179700 Sobic002G350300--Sobic009G179700 Sobic001G107500 Sobic001G107500 Sobic002G350300--Sobic001G107500 Sobic002G350300--Sobic001G512700 Sobic007G132400 Sobic007G132400 Sobic002G350300--Sobic007G132400 Sobic010G028300 Sobic010G028300 Sobic002G350300--Sobic010G028300 Sobic001G119300 Sobic001G119300 Sobic002G350300--Sobic001G119300 Sobic006G088100 Sobic006G088100 Sobic002G350300--Sobic006G088100 Sobic003G131400--Sobic004G117900 Sobic003G131400--Sobic010G223700 Sobic001G031600 Sobic001G031600 Sobic003G131400--Sobic001G031600 Sobic001G105500 Sobic001G105500 Sobic003G131400--Sobic001G105500 Sobic003G309200 Sobic003G309200 Sobic003G131400--Sobic003G309200 Sobic003G131400--Sobic010G240900 Sobic003G131400--Sobic007G019800 Sobic010G025300 Sobic010G025300 Sobic003G131400--Sobic010G025300 Sobic001G126100 Sobic001G126100 Sobic003G131400--Sobic001G126100 Sobic004G121100 Sobic004G121100 Sobic007G019800--Sobic004G121100 Sobic001G472600 Sobic001G472600 Sobic007G019800--Sobic001G472600 Sobic004G059000 Sobic004G059000 Sobic007G019800--Sobic004G059000 Sobic009G193400 Sobic009G193400 Sobic007G019800--Sobic009G193400 Sobic002G113900 Sobic002G113900 Sobic007G019800--Sobic002G113900 Sobic007G019800--Sobic004G117900 Sobic007G019800--Sobic002G350300 Sobic004G301900 Sobic004G301900 Sobic007G019800--Sobic004G301900 Sobic009G165800 Sobic009G165800 Sobic007G019800--Sobic009G165800 Sobic001G333200 Sobic001G333200 Sobic002G262600--Sobic001G333200 Sobic002G262600--Sobic002G350300 Sobic006G209500 Sobic006G209500 Sobic002G262600--Sobic006G209500 Sobic004G049100 Sobic004G049100 Sobic002G262600--Sobic004G049100 Sobic006G261800 Sobic006G261800 Sobic002G262600--Sobic006G261800 Sobic004G231400 Sobic004G231400 Sobic002G262600--Sobic004G231400 Sobic002G262600--Sobic006G088100 Sobic002G262600--Sobic004G117900 Sobic007G160600 Sobic007G160600 Sobic002G262600--Sobic007G160600 Sobic001G512700--Sobic008G047800 Sobic002G006900 Sobic002G006900 Sobic001G512700--Sobic002G006900 Sobic001G512700--Sobic003G248200 Sobic001G497300 Sobic001G497300 Sobic001G512700--Sobic001G497300 Sobic007G118600 Sobic007G118600 Sobic001G512700--Sobic007G118600 Sobic004G021100 Sobic004G021100 Sobic001G512700--Sobic004G021100 Sobic005G045300 Sobic005G045300 Sobic001G512700--Sobic005G045300 Sobic001G512700--Sobic002G297200 Sobic008G067600 Sobic008G067600 Sobic001G512700--Sobic008G067600 Sobic003G397800 Sobic003G397800 Sobic002G297200--Sobic003G397800 Sobic010G101800 Sobic010G101800 Sobic002G297200--Sobic010G101800 Sobic002G297200--Sobic001G512700 Sobic004G146500 Sobic004G146500 Sobic002G297200--Sobic004G146500 Sobic002G297200--Sobic008G047800 Sobic001G109800 Sobic001G109800 Sobic002G297200--Sobic001G109800 Sobic001G155000 Sobic001G155000 Sobic002G297200--Sobic001G155000 Sobic001G205200 Sobic001G205200 Sobic002G297200--Sobic001G205200 Sobic002G297200--Sobic002G006900 Sobic007G207400 Sobic007G207400 Sobic010G240900--Sobic007G207400 Sobic004G041500 Sobic004G041500 Sobic010G240900--Sobic004G041500 Sobic010G240900--Sobic004G117900 Sobic001G297500 Sobic001G297500 Sobic010G240900--Sobic001G297500 Sobic003G341400 Sobic003G341400 Sobic010G240900--Sobic003G341400 Sobic001G046200 Sobic001G046200 Sobic010G240900--Sobic001G046200 Sobic010G240900--Sobic003G131400 Sobic001G492300 Sobic001G492300 Sobic010G240900--Sobic001G492300 Sobic010G240900--Sobic009G205200 Sobic010G223700--Sobic003G309200 Sobic003G221900 Sobic003G221900 Sobic010G223700--Sobic003G221900 Sobic001G122832 Sobic001G122832 Sobic010G223700--Sobic001G122832 Sobic010G223700--Sobic010G025300 Sobic001G425800 Sobic001G425800 Sobic010G223700--Sobic001G425800 Sobic001G389100 Sobic001G389100 Sobic010G223700--Sobic001G389100 Sobic010G223700--Sobic004G117900 Sobic003G411900 Sobic003G411900 Sobic010G223700--Sobic003G411900 Sobic010G223700--Sobic003G131400
Octagon: transcription factors


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