Gene annotation
Transcriptome id Sobic.007G019800.2,Sobic.007G019800.1
Synonym Sb07g001710
Functional annotation expressed protein
UniProt A0A1B6PF12 , A0A1Z5R7R4
Pfam PF10248
Panther DB PTHR13105 PTHR13105:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G22740 : glycine-rich protein
RAP-DB (Rice) LOC_Os08g02460.1 : expressed protein
MaizeGDB (Corn) Zm00025a040296 , Zm00025a030236
Brachypodium -
Barley -
Wheat TraesCS7A02G314900 , TraesCS7A02G314900 , TraesCS7B02G215500 , TraesCS7B02G215500 , TraesCS7B02G215500 , TraesCS7D02G312000
Populus PNT03402 , PNT03401 , PNT03404


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cDNA sequences
Sobic.007G019800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G121100 expressed protein -
2 Sobic.001G472600 gibberellin response modulator protein, putative, expressed -
3 Sobic.004G059000 serine/threonine-protein kinase HT1, putative, expressed -
4 Sobic.009G193400 AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
5 Sobic.002G113900 lipid binding protein, putative, expressed -
6 Sobic.004G117900 expressed protein -
7 Sobic.002G350300 gamma response I protein, putative, expressed K13096: splicing factor 4
8 Sobic.004G301900 potyvirus VPg interacting protein, putative, expressed -
9 Sobic.009G165800 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
10 Sobic.004G253000 AGAP000425-PA, putative, expressed K13120: protein FAM32A
11 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
12 Sobic.006G119800 leucine rich repeat containing protein, expressed -
13 Sobic.002G262600 protein kinase, putative, expressed K13436: pto-interacting protein 1
14 Sobic.003G010400 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
15 Sobic.006G017000 WD domain, G-beta repeat domain containing protein, expressed K12862: PLRG1, PRL1, pleiotropic regulator 1
16 Sobic.009G205200 OsFBX170 - F-box domain containing protein, expressed -
17 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
18 Sobic.003G350600 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
19 Sobic.009G259400 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
20 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2


Gene co-expression network
sample Sobic007G019800 Sobic007G019800 Sobic004G121100 Sobic004G121100 Sobic007G019800--Sobic004G121100 Sobic001G472600 Sobic001G472600 Sobic007G019800--Sobic001G472600 Sobic004G059000 Sobic004G059000 Sobic007G019800--Sobic004G059000 Sobic009G193400 Sobic009G193400 Sobic007G019800--Sobic009G193400 Sobic002G113900 Sobic002G113900 Sobic007G019800--Sobic002G113900 Sobic004G117900 Sobic004G117900 Sobic007G019800--Sobic004G117900 Sobic002G350300 Sobic002G350300 Sobic007G019800--Sobic002G350300 Sobic004G301900 Sobic004G301900 Sobic007G019800--Sobic004G301900 Sobic009G165800 Sobic009G165800 Sobic007G019800--Sobic009G165800 Sobic009G205200 Sobic009G205200 Sobic004G121100--Sobic009G205200 Sobic006G200600 Sobic006G200600 Sobic004G121100--Sobic006G200600 Sobic006G228500 Sobic006G228500 Sobic004G121100--Sobic006G228500 Sobic001G281600 Sobic001G281600 Sobic004G121100--Sobic001G281600 Sobic009G259400 Sobic009G259400 Sobic004G121100--Sobic009G259400 Sobic007G078500 Sobic007G078500 Sobic004G121100--Sobic007G078500 Sobic001G080700 Sobic001G080700 Sobic004G121100--Sobic001G080700 Sobic004G121100--Sobic002G350300 Sobic010G251000 Sobic010G251000 Sobic004G121100--Sobic010G251000 Sobic001G472600--Sobic007G019800 Sobic002G215100 Sobic002G215100 Sobic001G472600--Sobic002G215100 Sobic001G421300 Sobic001G421300 Sobic001G472600--Sobic001G421300 Sobic006G109300 Sobic006G109300 Sobic001G472600--Sobic006G109300 Sobic002G262600 Sobic002G262600 Sobic001G472600--Sobic002G262600 Sobic003G345400 Sobic003G345400 Sobic001G472600--Sobic003G345400 Sobic004G146800 Sobic004G146800 Sobic001G472600--Sobic004G146800 Sobic003G084700 Sobic003G084700 Sobic001G472600--Sobic003G084700 Sobic003G119800 Sobic003G119800 Sobic001G472600--Sobic003G119800 Sobic004G305600 Sobic004G305600 Sobic004G059000--Sobic004G305600 Sobic001G061700 Sobic001G061700 Sobic004G059000--Sobic001G061700 Sobic003G250500 Sobic003G250500 Sobic004G059000--Sobic003G250500 Sobic004G059000--Sobic007G019800 Sobic004G253000 Sobic004G253000 Sobic004G059000--Sobic004G253000 Sobic001G131800 Sobic001G131800 Sobic004G059000--Sobic001G131800 Sobic002G256300 Sobic002G256300 Sobic004G059000--Sobic002G256300 Sobic002G365100 Sobic002G365100 Sobic004G059000--Sobic002G365100 Sobic003G405700 Sobic003G405700 Sobic004G059000--Sobic003G405700 Sobic003G007500 Sobic003G007500 Sobic009G193400--Sobic003G007500 Sobic003G433100 Sobic003G433100 Sobic009G193400--Sobic003G433100 Sobic009G171700 Sobic009G171700 Sobic009G193400--Sobic009G171700 Sobic008G180900 Sobic008G180900 Sobic009G193400--Sobic008G180900 Sobic003G295400 Sobic003G295400 Sobic009G193400--Sobic003G295400 Sobic004G104900 Sobic004G104900 Sobic009G193400--Sobic004G104900 Sobic001G478300 Sobic001G478300 Sobic009G193400--Sobic001G478300 Sobic002G413000 Sobic002G413000 Sobic009G193400--Sobic002G413000 Sobic010G083700 Sobic010G083700 Sobic009G193400--Sobic010G083700 Sobic006G270900 Sobic006G270900 Sobic002G113900--Sobic006G270900 Sobic009G004600 Sobic009G004600 Sobic002G113900--Sobic009G004600 Sobic004G226800 Sobic004G226800 Sobic002G113900--Sobic004G226800 Sobic006G049700 Sobic006G049700 Sobic002G113900--Sobic006G049700 Sobic004G356900 Sobic004G356900 Sobic002G113900--Sobic004G356900 Sobic002G113900--Sobic004G301900 Sobic002G113900--Sobic007G019800 Sobic002G113900--Sobic004G104900 Sobic002G268400 Sobic002G268400 Sobic002G113900--Sobic002G268400 Sobic003G248200 Sobic003G248200 Sobic004G117900--Sobic003G248200 Sobic004G117900--Sobic002G350300 Sobic003G131400 Sobic003G131400 Sobic004G117900--Sobic003G131400 Sobic004G117900--Sobic007G019800 Sobic004G117900--Sobic002G262600 Sobic001G512700 Sobic001G512700 Sobic004G117900--Sobic001G512700 Sobic002G297200 Sobic002G297200 Sobic004G117900--Sobic002G297200 Sobic010G240900 Sobic010G240900 Sobic004G117900--Sobic010G240900 Sobic010G223700 Sobic010G223700 Sobic004G117900--Sobic010G223700 Sobic008G179700 Sobic008G179700 Sobic002G350300--Sobic008G179700 Sobic002G350300--Sobic009G205200 Sobic009G179700 Sobic009G179700 Sobic002G350300--Sobic009G179700 Sobic001G107500 Sobic001G107500 Sobic002G350300--Sobic001G107500 Sobic002G350300--Sobic001G512700 Sobic007G132400 Sobic007G132400 Sobic002G350300--Sobic007G132400 Sobic010G028300 Sobic010G028300 Sobic002G350300--Sobic010G028300 Sobic001G119300 Sobic001G119300 Sobic002G350300--Sobic001G119300 Sobic006G088100 Sobic006G088100 Sobic002G350300--Sobic006G088100 Sobic010G090900 Sobic010G090900 Sobic004G301900--Sobic010G090900 Sobic004G301900--Sobic003G250500 Sobic004G301900--Sobic002G113900 Sobic004G301900--Sobic004G059000 Sobic004G301900--Sobic004G253000 Sobic001G512600 Sobic001G512600 Sobic004G301900--Sobic001G512600 Sobic004G301900--Sobic007G019800 Sobic001G051200 Sobic001G051200 Sobic004G301900--Sobic001G051200 Sobic004G301900--Sobic004G356900 Sobic009G165800--Sobic001G080700 Sobic001G047400 Sobic001G047400 Sobic009G165800--Sobic001G047400 Sobic006G101700 Sobic006G101700 Sobic009G165800--Sobic006G101700 Sobic002G110700 Sobic002G110700 Sobic009G165800--Sobic002G110700 Sobic003G015900 Sobic003G015900 Sobic009G165800--Sobic003G015900 Sobic009G165800--Sobic010G083700 Sobic009G165800--Sobic010G251000 Sobic009G165800--Sobic004G121100 Sobic003G264200 Sobic003G264200 Sobic009G165800--Sobic003G264200
Octagon: transcription factors


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