Gene annotation
Transcriptome id Sobic.006G119800.1
Synonym Sb06g020060, PIRL9
Functional annotation leucine rich repeat containing protein, expressed
UniProt C5YAQ1
Pfam PF13855
Panther DB PTHR23155 PTHR23155:SF516
NCBI CDD KOG0617; Ras suppressor protein (contains leucine-rich repeats)
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G11330 : plant intracellular ras group-related LRR 9
RAP-DB (Rice) LOC_Os04g40080.1 : leucine rich repeat containing protein, expressed
MaizeGDB (Corn) Zm00025a056303
Brachypodium KQK00142
Barley -
Wheat TraesCS2D02G335800 , TraesCS2A02G327100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
2 Sobic.001G387600 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
3 Sobic.004G121100 expressed protein -
4 Sobic.007G019800 expressed protein -
5 Sobic.006G273200 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@protein kinase family protein, putative, expressed K14500: BR-signaling kinase
6 Sobic.010G068500 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
7 Sobic.004G301900 potyvirus VPg interacting protein, putative, expressed -
8 Sobic.004G119100 expressed protein -
9 Sobic.009G233300 60S ribosomal protein L18a-1, putative, expressed -
10 Sobic.006G194500 expressed protein -
11 Sobic.010G090900 membrane-anchored ubiquitin-fold protein, putative, expressed -
12 Sobic.009G219000 ANTH/ENTH domain containing protein, putative, expressed -
13 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
14 Sobic.001G261456 - -
15 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
16 Sobic.003G309900 OsFBX26 - F-box domain containing protein, expressed -
17 Sobic.002G251700 no apical meristem protein, putative, expressed -
18 Sobic.006G225600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
19 Sobic.007G078500 serine/threonine-protein kinase HT1, putative, expressed -
20 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2


Gene co-expression network
sample Sobic006G119800 Sobic006G119800 Sobic001G281600 Sobic001G281600 Sobic006G119800--Sobic001G281600 Sobic001G387600 Sobic001G387600 Sobic006G119800--Sobic001G387600 Sobic004G121100 Sobic004G121100 Sobic006G119800--Sobic004G121100 Sobic007G019800 Sobic007G019800 Sobic006G119800--Sobic007G019800 Sobic006G273200 Sobic006G273200 Sobic006G119800--Sobic006G273200 Sobic010G068500 Sobic010G068500 Sobic006G119800--Sobic010G068500 Sobic004G301900 Sobic004G301900 Sobic006G119800--Sobic004G301900 Sobic004G119100 Sobic004G119100 Sobic006G119800--Sobic004G119100 Sobic009G233300 Sobic009G233300 Sobic006G119800--Sobic009G233300 Sobic010G279700 Sobic010G279700 Sobic001G281600--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic003G401100 Sobic003G401100 Sobic001G281600--Sobic003G401100 Sobic001G281600--Sobic004G121100 Sobic009G215800 Sobic009G215800 Sobic001G281600--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic001G281600--Sobic004G084300 Sobic009G050900 Sobic009G050900 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700 Sobic003G309900 Sobic003G309900 Sobic001G387600--Sobic003G309900 Sobic001G387600--Sobic006G119800 Sobic003G413500 Sobic003G413500 Sobic001G387600--Sobic003G413500 Sobic001G387600--Sobic009G233300 Sobic001G191600 Sobic001G191600 Sobic001G387600--Sobic001G191600 Sobic008G146900 Sobic008G146900 Sobic001G387600--Sobic008G146900 Sobic001G222250 Sobic001G222250 Sobic001G387600--Sobic001G222250 Sobic001G253700 Sobic001G253700 Sobic001G387600--Sobic001G253700 Sobic010G009400 Sobic010G009400 Sobic001G387600--Sobic010G009400 Sobic009G205200 Sobic009G205200 Sobic004G121100--Sobic009G205200 Sobic004G121100--Sobic006G200600 Sobic006G228500 Sobic006G228500 Sobic004G121100--Sobic006G228500 Sobic004G121100--Sobic001G281600 Sobic009G259400 Sobic009G259400 Sobic004G121100--Sobic009G259400 Sobic004G121100--Sobic007G078500 Sobic001G080700 Sobic001G080700 Sobic004G121100--Sobic001G080700 Sobic002G350300 Sobic002G350300 Sobic004G121100--Sobic002G350300 Sobic010G251000 Sobic010G251000 Sobic004G121100--Sobic010G251000 Sobic007G019800--Sobic004G121100 Sobic001G472600 Sobic001G472600 Sobic007G019800--Sobic001G472600 Sobic004G059000 Sobic004G059000 Sobic007G019800--Sobic004G059000 Sobic009G193400 Sobic009G193400 Sobic007G019800--Sobic009G193400 Sobic002G113900 Sobic002G113900 Sobic007G019800--Sobic002G113900 Sobic004G117900 Sobic004G117900 Sobic007G019800--Sobic004G117900 Sobic007G019800--Sobic002G350300 Sobic007G019800--Sobic004G301900 Sobic009G165800 Sobic009G165800 Sobic007G019800--Sobic009G165800 Sobic001G497300 Sobic001G497300 Sobic006G273200--Sobic001G497300 Sobic009G065100 Sobic009G065100 Sobic006G273200--Sobic009G065100 Sobic004G205600 Sobic004G205600 Sobic006G273200--Sobic004G205600 Sobic007G096000 Sobic007G096000 Sobic006G273200--Sobic007G096000 Sobic006G273200--Sobic009G233300 Sobic008G062000 Sobic008G062000 Sobic006G273200--Sobic008G062000 Sobic006G237400 Sobic006G237400 Sobic006G273200--Sobic006G237400 Sobic007G205800 Sobic007G205800 Sobic006G273200--Sobic007G205800 Sobic003G176600 Sobic003G176600 Sobic006G273200--Sobic003G176600 Sobic009G219000 Sobic009G219000 Sobic010G068500--Sobic009G219000 Sobic010G068500--Sobic006G119800 Sobic002G134600 Sobic002G134600 Sobic010G068500--Sobic002G134600 Sobic003G309200 Sobic003G309200 Sobic010G068500--Sobic003G309200 Sobic003G010400 Sobic003G010400 Sobic010G068500--Sobic003G010400 Sobic006G225600 Sobic006G225600 Sobic010G068500--Sobic006G225600 Sobic001G162100 Sobic001G162100 Sobic010G068500--Sobic001G162100 Sobic001G425800 Sobic001G425800 Sobic010G068500--Sobic001G425800 Sobic001G516100 Sobic001G516100 Sobic010G068500--Sobic001G516100 Sobic010G090900 Sobic010G090900 Sobic004G301900--Sobic010G090900 Sobic003G250500 Sobic003G250500 Sobic004G301900--Sobic003G250500 Sobic004G301900--Sobic002G113900 Sobic004G301900--Sobic004G059000 Sobic004G253000 Sobic004G253000 Sobic004G301900--Sobic004G253000 Sobic001G512600 Sobic001G512600 Sobic004G301900--Sobic001G512600 Sobic004G301900--Sobic007G019800 Sobic001G051200 Sobic001G051200 Sobic004G301900--Sobic001G051200 Sobic004G356900 Sobic004G356900 Sobic004G301900--Sobic004G356900 Sobic004G119100--Sobic001G253700 Sobic006G034000 Sobic006G034000 Sobic004G119100--Sobic006G034000 Sobic004G119100--Sobic006G119800 Sobic003G233600 Sobic003G233600 Sobic004G119100--Sobic003G233600 Sobic001G000200 Sobic001G000200 Sobic004G119100--Sobic001G000200 Sobic010G205800 Sobic010G205800 Sobic004G119100--Sobic010G205800 Sobic003G169600 Sobic003G169600 Sobic004G119100--Sobic003G169600 Sobic007G007000 Sobic007G007000 Sobic004G119100--Sobic007G007000 Sobic004G119100--Sobic010G090900 Sobic009G233300--Sobic006G273200 Sobic008G165700 Sobic008G165700 Sobic009G233300--Sobic008G165700 Sobic002G187801 Sobic002G187801 Sobic009G233300--Sobic002G187801 Sobic009G233300--Sobic006G119800 Sobic009G233300--Sobic001G387600 Sobic001G372500 Sobic001G372500 Sobic009G233300--Sobic001G372500 Sobic001G284800 Sobic001G284800 Sobic009G233300--Sobic001G284800 Sobic009G233300--Sobic003G309900 Sobic009G233300--Sobic003G176600
Octagon: transcription factors


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