Gene annotation
Transcriptome id Sobic.010G090900.1
Synonym MUB6, Sb10g007900
Functional annotation membrane-anchored ubiquitin-fold protein, putative, expressed
UniProt C5Z710
Pfam PF13881
Panther DB PTHR13169
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G22050 : membrane-anchored ubiquitin-fold protein 6 precursor
RAP-DB (Rice) LOC_Os02g51500.3 : membrane-anchored ubiquitin-fold protein, putative, expressed
MaizeGDB (Corn) Zm00025a022111
Brachypodium KQK01890 , KQK01889 , KQK18906
Barley HORVU6Hr1G075180.1 , HORVU6Hr1G075180.2 , HORVU7Hr1G037480.3 , HORVU7Hr1G037480.2 , HORVU7Hr1G037480.1 , HORVU7Hr1G037480.4
Wheat TraesCS7A02G182400 , TraesCS6D02G282600 , TraesCS6D02G282600 , TraesCS7B02G087300 , TraesCS7B02G087300 , TraesCS7D02G183800 , TraesCS7D02G183800 , TraesCS6B02G332300 , TraesCS6B02G332300 , TraesCS6A02G303000 , TraesCS6A02G303000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G301900 potyvirus VPg interacting protein, putative, expressed -
2 Sobic.001G051200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
K08515: vesicle-associated membrane protein 7
3 Sobic.001G098200 magnesium-dependent phosphatase 1, putative, expressed K17619: magnesium-dependent phosphatase 1
4 Sobic.001G123000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
5 Sobic.006G119800 leucine rich repeat containing protein, expressed -
6 Sobic.004G119100 expressed protein -
7 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
8 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
9 Sobic.002G092300 WD domain, G-beta repeat domain containing protein, expressed -
10 Sobic.003G344900 selT-like protein precursor, putative, expressed -
11 Sobic.006G242300 - -
12 Sobic.006G054500 membrane-anchored ubiquitin-fold protein, putative, expressed -
13 Sobic.002G251700 no apical meristem protein, putative, expressed -
14 Sobic.003G077900 vacuolar protein sorting-associating protein 4B, putative, expressed K12196: vacuolar protein-sorting-associated protein 4
15 Sobic.007G079700 pentatricopeptide, putative, expressed -
16 Sobic.004G356900 - K13025: EIF4A3, ATP-dependent RNA helicase
17 Sobic.002G039000 ML domain protein, putative, expressed -
18 Sobic.003G405700 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
19 Sobic.006G225600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
20 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G090900 Sobic010G090900 Sobic004G301900 Sobic004G301900 Sobic010G090900--Sobic004G301900 Sobic001G051200 Sobic001G051200 Sobic010G090900--Sobic001G051200 Sobic001G098200 Sobic001G098200 Sobic010G090900--Sobic001G098200 Sobic001G123000 Sobic001G123000 Sobic010G090900--Sobic001G123000 Sobic006G119800 Sobic006G119800 Sobic010G090900--Sobic006G119800 Sobic004G119100 Sobic004G119100 Sobic010G090900--Sobic004G119100 Sobic003G250500 Sobic003G250500 Sobic010G090900--Sobic003G250500 Sobic001G263000 Sobic001G263000 Sobic010G090900--Sobic001G263000 Sobic002G092300 Sobic002G092300 Sobic010G090900--Sobic002G092300 Sobic004G301900--Sobic010G090900 Sobic004G301900--Sobic003G250500 Sobic002G113900 Sobic002G113900 Sobic004G301900--Sobic002G113900 Sobic004G059000 Sobic004G059000 Sobic004G301900--Sobic004G059000 Sobic004G253000 Sobic004G253000 Sobic004G301900--Sobic004G253000 Sobic001G512600 Sobic001G512600 Sobic004G301900--Sobic001G512600 Sobic007G019800 Sobic007G019800 Sobic004G301900--Sobic007G019800 Sobic004G301900--Sobic001G051200 Sobic004G356900 Sobic004G356900 Sobic004G301900--Sobic004G356900 Sobic003G015900 Sobic003G015900 Sobic001G051200--Sobic003G015900 Sobic003G007500 Sobic003G007500 Sobic001G051200--Sobic003G007500 Sobic003G261400 Sobic003G261400 Sobic001G051200--Sobic003G261400 Sobic001G047400 Sobic001G047400 Sobic001G051200--Sobic001G047400 Sobic010G000900 Sobic010G000900 Sobic001G051200--Sobic010G000900 Sobic007G168600 Sobic007G168600 Sobic001G051200--Sobic007G168600 Sobic010G058500 Sobic010G058500 Sobic001G051200--Sobic010G058500 Sobic002G400000 Sobic002G400000 Sobic001G051200--Sobic002G400000 Sobic010G168600 Sobic010G168600 Sobic001G051200--Sobic010G168600 Sobic004G234900 Sobic004G234900 Sobic001G098200--Sobic004G234900 Sobic006G225600 Sobic006G225600 Sobic001G098200--Sobic006G225600 Sobic001G098200--Sobic004G253000 Sobic002G251700 Sobic002G251700 Sobic001G098200--Sobic002G251700 Sobic001G098200--Sobic010G090900 Sobic003G050600 Sobic003G050600 Sobic001G098200--Sobic003G050600 Sobic001G098200--Sobic004G301900 Sobic001G098200--Sobic001G051200 Sobic003G044200 Sobic003G044200 Sobic001G098200--Sobic003G044200 Sobic007G007000 Sobic007G007000 Sobic001G123000--Sobic007G007000 Sobic009G259400 Sobic009G259400 Sobic001G123000--Sobic009G259400 Sobic003G344900 Sobic003G344900 Sobic001G123000--Sobic003G344900 Sobic001G120300 Sobic001G120300 Sobic001G123000--Sobic001G120300 Sobic001G123000--Sobic001G098200 Sobic001G123000--Sobic010G090900 Sobic006G114500 Sobic006G114500 Sobic001G123000--Sobic006G114500 Sobic005G091600 Sobic005G091600 Sobic001G123000--Sobic005G091600 Sobic007G177000 Sobic007G177000 Sobic001G123000--Sobic007G177000 Sobic001G281600 Sobic001G281600 Sobic006G119800--Sobic001G281600 Sobic001G387600 Sobic001G387600 Sobic006G119800--Sobic001G387600 Sobic004G121100 Sobic004G121100 Sobic006G119800--Sobic004G121100 Sobic006G119800--Sobic007G019800 Sobic006G273200 Sobic006G273200 Sobic006G119800--Sobic006G273200 Sobic010G068500 Sobic010G068500 Sobic006G119800--Sobic010G068500 Sobic006G119800--Sobic004G301900 Sobic006G119800--Sobic004G119100 Sobic009G233300 Sobic009G233300 Sobic006G119800--Sobic009G233300 Sobic001G253700 Sobic001G253700 Sobic004G119100--Sobic001G253700 Sobic006G034000 Sobic006G034000 Sobic004G119100--Sobic006G034000 Sobic004G119100--Sobic006G119800 Sobic003G233600 Sobic003G233600 Sobic004G119100--Sobic003G233600 Sobic001G000200 Sobic001G000200 Sobic004G119100--Sobic001G000200 Sobic010G205800 Sobic010G205800 Sobic004G119100--Sobic010G205800 Sobic003G169600 Sobic003G169600 Sobic004G119100--Sobic003G169600 Sobic004G119100--Sobic007G007000 Sobic004G119100--Sobic010G090900 Sobic003G250500--Sobic004G059000 Sobic004G305600 Sobic004G305600 Sobic003G250500--Sobic004G305600 Sobic003G250500--Sobic004G301900 Sobic008G062000 Sobic008G062000 Sobic003G250500--Sobic008G062000 Sobic003G250500--Sobic001G281600 Sobic003G226500 Sobic003G226500 Sobic003G250500--Sobic003G226500 Sobic003G250500--Sobic004G253000 Sobic003G250500--Sobic001G512600 Sobic001G119300 Sobic001G119300 Sobic003G250500--Sobic001G119300 Sobic009G004600 Sobic009G004600 Sobic001G263000--Sobic009G004600 Sobic006G244700 Sobic006G244700 Sobic001G263000--Sobic006G244700 Sobic009G033900 Sobic009G033900 Sobic001G263000--Sobic009G033900 Sobic002G209400 Sobic002G209400 Sobic001G263000--Sobic002G209400 Sobic002G268400 Sobic002G268400 Sobic001G263000--Sobic002G268400 Sobic002G039000 Sobic002G039000 Sobic001G263000--Sobic002G039000 Sobic004G074300 Sobic004G074300 Sobic001G263000--Sobic004G074300 Sobic001G263000--Sobic004G356900 Sobic010G057900 Sobic010G057900 Sobic001G263000--Sobic010G057900 Sobic010G279700 Sobic010G279700 Sobic002G092300--Sobic010G279700 Sobic004G250300 Sobic004G250300 Sobic002G092300--Sobic004G250300 Sobic004G021200 Sobic004G021200 Sobic002G092300--Sobic004G021200 Sobic007G115200 Sobic007G115200 Sobic002G092300--Sobic007G115200 Sobic008G092300 Sobic008G092300 Sobic002G092300--Sobic008G092300 Sobic002G092300--Sobic001G281600 Sobic002G092300--Sobic001G000200 Sobic002G092300--Sobic003G250500 Sobic001G016000 Sobic001G016000 Sobic002G092300--Sobic001G016000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.