Gene annotation
Transcriptome id Sobic.002G039000.1
Synonym Sb02g003360
Functional annotation ML domain protein, putative, expressed
UniProt C5X9N2
Pfam PF02221
Panther DB PTHR11306 PTHR11306:SF12
NCBI CDD KOG4680; Uncharacterized conserved protein, contains ML domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11780 : MD-2-related lipid recognition domain-containing protein / ML domain-containing protein
RAP-DB (Rice) LOC_Os07g06590.1 : ML domain protein, putative, expressed
MaizeGDB (Corn) Zm00025a045051 , Zm00025a016152
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G039000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
2 Sobic.006G244700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed K00794: ribH, 6,7-dimethyl-8-ribityllumazine synthase
3 Sobic.010G090900 membrane-anchored ubiquitin-fold protein, putative, expressed -
4 Sobic.001G380500 appr-1-p processing enzyme family protein, putative, expressed -
5 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
6 Sobic.009G029700 aminotransferase, putative, expressed K00818: E2.6.1.11, acetylornithine aminotransferase
7 Sobic.009G243100 pex14, putative, expressed -
8 Sobic.003G239800 expressed protein K11878: PSMG4, proteasome assembly chaperone 4
9 Sobic.004G348900 expressed protein -
10 Sobic.007G188300 integral membrane family protein, putative, expressed -
11 Sobic.003G004700 SOUL heme-binding protein, putative, expressed -
12 Sobic.010G176500 expressed protein -
13 Sobic.006G076601 - -
14 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC
15 Sobic.010G277100 regulator of ribonuclease, putative, expressed -
16 Sobic.001G175800 expressed protein -
17 Sobic.002G116900 expressed protein -
18 Sobic.002G364800 COBW domain containing protein, putative, expressed -
19 Sobic.004G119100 expressed protein -
20 Sobic.006G280600 tubulin folding cofactor B, putative, expressed K17262: TBCB, CKAP1, tubulin-specific chaperone B


Gene co-expression network
sample Sobic002G039000 Sobic002G039000 Sobic001G263000 Sobic001G263000 Sobic002G039000--Sobic001G263000 Sobic006G244700 Sobic006G244700 Sobic002G039000--Sobic006G244700 Sobic010G090900 Sobic010G090900 Sobic002G039000--Sobic010G090900 Sobic001G380500 Sobic001G380500 Sobic002G039000--Sobic001G380500 Sobic009G004600 Sobic009G004600 Sobic002G039000--Sobic009G004600 Sobic009G029700 Sobic009G029700 Sobic002G039000--Sobic009G029700 Sobic009G243100 Sobic009G243100 Sobic002G039000--Sobic009G243100 Sobic003G239800 Sobic003G239800 Sobic002G039000--Sobic003G239800 Sobic004G348900 Sobic004G348900 Sobic002G039000--Sobic004G348900 Sobic001G263000--Sobic009G004600 Sobic001G263000--Sobic006G244700 Sobic009G033900 Sobic009G033900 Sobic001G263000--Sobic009G033900 Sobic002G209400 Sobic002G209400 Sobic001G263000--Sobic002G209400 Sobic002G268400 Sobic002G268400 Sobic001G263000--Sobic002G268400 Sobic001G263000--Sobic002G039000 Sobic004G074300 Sobic004G074300 Sobic001G263000--Sobic004G074300 Sobic004G356900 Sobic004G356900 Sobic001G263000--Sobic004G356900 Sobic010G057900 Sobic010G057900 Sobic001G263000--Sobic010G057900 Sobic006G244700--Sobic001G263000 Sobic001G048200 Sobic001G048200 Sobic006G244700--Sobic001G048200 Sobic005G044800 Sobic005G044800 Sobic006G244700--Sobic005G044800 Sobic007G188300 Sobic007G188300 Sobic006G244700--Sobic007G188300 Sobic004G130900 Sobic004G130900 Sobic006G244700--Sobic004G130900 Sobic006G244700--Sobic009G004600 Sobic003G261400 Sobic003G261400 Sobic006G244700--Sobic003G261400 Sobic006G244700--Sobic002G209400 Sobic004G081800 Sobic004G081800 Sobic006G244700--Sobic004G081800 Sobic004G301900 Sobic004G301900 Sobic010G090900--Sobic004G301900 Sobic001G051200 Sobic001G051200 Sobic010G090900--Sobic001G051200 Sobic001G098200 Sobic001G098200 Sobic010G090900--Sobic001G098200 Sobic001G123000 Sobic001G123000 Sobic010G090900--Sobic001G123000 Sobic006G119800 Sobic006G119800 Sobic010G090900--Sobic006G119800 Sobic004G119100 Sobic004G119100 Sobic010G090900--Sobic004G119100 Sobic003G250500 Sobic003G250500 Sobic010G090900--Sobic003G250500 Sobic010G090900--Sobic001G263000 Sobic002G092300 Sobic002G092300 Sobic010G090900--Sobic002G092300 Sobic001G380500--Sobic009G029700 Sobic010G108900 Sobic010G108900 Sobic001G380500--Sobic010G108900 Sobic007G168200 Sobic007G168200 Sobic001G380500--Sobic007G168200 Sobic007G029100 Sobic007G029100 Sobic001G380500--Sobic007G029100 Sobic001G218800 Sobic001G218800 Sobic001G380500--Sobic001G218800 Sobic001G380500--Sobic002G039000 Sobic006G168400 Sobic006G168400 Sobic001G380500--Sobic006G168400 Sobic001G418800 Sobic001G418800 Sobic001G380500--Sobic001G418800 Sobic002G404200 Sobic002G404200 Sobic001G380500--Sobic002G404200 Sobic002G400000 Sobic002G400000 Sobic009G004600--Sobic002G400000 Sobic009G004600--Sobic004G356900 Sobic003G217400 Sobic003G217400 Sobic009G004600--Sobic003G217400 Sobic009G198500 Sobic009G198500 Sobic009G004600--Sobic009G198500 Sobic009G004600--Sobic001G263000 Sobic001G314500 Sobic001G314500 Sobic009G004600--Sobic001G314500 Sobic002G113900 Sobic002G113900 Sobic009G004600--Sobic002G113900 Sobic010G205300 Sobic010G205300 Sobic009G004600--Sobic010G205300 Sobic007G168600 Sobic007G168600 Sobic009G004600--Sobic007G168600 Sobic009G029700--Sobic001G380500 Sobic004G268100 Sobic004G268100 Sobic009G029700--Sobic004G268100 Sobic009G029700--Sobic007G029100 Sobic004G117800 Sobic004G117800 Sobic009G029700--Sobic004G117800 Sobic001G437200 Sobic001G437200 Sobic009G029700--Sobic001G437200 Sobic009G029700--Sobic002G039000 Sobic003G310100 Sobic003G310100 Sobic009G029700--Sobic003G310100 Sobic002G281800 Sobic002G281800 Sobic009G029700--Sobic002G281800 Sobic001G202500 Sobic001G202500 Sobic009G029700--Sobic001G202500 Sobic001G296900 Sobic001G296900 Sobic009G243100--Sobic001G296900 Sobic010G049100 Sobic010G049100 Sobic009G243100--Sobic010G049100 Sobic002G111200 Sobic002G111200 Sobic009G243100--Sobic002G111200 Sobic002G332400 Sobic002G332400 Sobic009G243100--Sobic002G332400 Sobic002G071000 Sobic002G071000 Sobic009G243100--Sobic002G071000 Sobic009G243100--Sobic002G039000 Sobic009G243100--Sobic009G004600 Sobic002G364800 Sobic002G364800 Sobic009G243100--Sobic002G364800 Sobic003G422900 Sobic003G422900 Sobic009G243100--Sobic003G422900 Sobic003G239800--Sobic004G356900 Sobic003G239800--Sobic009G004600 Sobic003G239800--Sobic010G205300 Sobic009G228800 Sobic009G228800 Sobic003G239800--Sobic009G228800 Sobic004G232800 Sobic004G232800 Sobic003G239800--Sobic004G232800 Sobic006G280600 Sobic006G280600 Sobic003G239800--Sobic006G280600 Sobic002G341800 Sobic002G341800 Sobic003G239800--Sobic002G341800 Sobic004G310500 Sobic004G310500 Sobic003G239800--Sobic004G310500 Sobic003G239800--Sobic007G188300 Sobic001G283200 Sobic001G283200 Sobic004G348900--Sobic001G283200 Sobic003G077900 Sobic003G077900 Sobic004G348900--Sobic003G077900 Sobic004G181900 Sobic004G181900 Sobic004G348900--Sobic004G181900 Sobic001G404100 Sobic001G404100 Sobic004G348900--Sobic001G404100 Sobic001G206900 Sobic001G206900 Sobic004G348900--Sobic001G206900 Sobic001G085100 Sobic001G085100 Sobic004G348900--Sobic001G085100 Sobic004G348900--Sobic002G400000 Sobic001G444300 Sobic001G444300 Sobic004G348900--Sobic001G444300 Sobic001G323000 Sobic001G323000 Sobic004G348900--Sobic001G323000
Octagon: transcription factors


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