Gene annotation
Transcriptome id Sobic.006G280600.2,Sobic.006G280600.1
Synonym Sb06g034100
Functional annotation tubulin folding cofactor B, putative, expressed
UniProt A0A1B6PPC1 , C5YB52
Pfam PF01302 PF14560
Panther DB PTHR18916
NCBI CDD KOG3206; Alpha-tubulin folding cofactor B
KEGG Orthology K17262; TBCB, CKAP1, tubulin-specific chaperone B
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G10220 : tubulin folding cofactor B
RAP-DB (Rice) LOC_Os04g59560.1 : tubulin folding cofactor B, putative, expressed
MaizeGDB (Corn) Zm00025a010572
Brachypodium KQJ85511
Barley -
Wheat TraesCS2D02G571000 , TraesCS2D02G571000 , TraesCS2D02G571000 , TraesCS2D02G571000
Populus -


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cDNA sequences
Sobic.006G280600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G168600 NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase
2 Sobic.004G356900 - K13025: EIF4A3, ATP-dependent RNA helicase
3 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
4 Sobic.001G085100 expressed protein -
5 Sobic.004G232800 expressed protein -
6 Sobic.003G239800 expressed protein K11878: PSMG4, proteasome assembly chaperone 4
7 Sobic.007G188300 integral membrane family protein, putative, expressed -
8 Sobic.001G078800 similar to Serine/threonine-protein kinase SAPK8(PubMedID : 29862293)@CAMK_CAMK_like.22 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
9 Sobic.009G238850 - -
10 Sobic.001G096300 deoxyhypusine synthase, putative, expressed K00809: DHPS, deoxyhypusine synthase
11 Sobic.010G205300 secreted salivary protein, putative, expressed -
12 Sobic.002G256200 cyclin, putative, expressed K15161: CCNC, cyclin-C
13 Sobic.002G317300 CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
14 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
15 Sobic.003G261400 DUF292 domain containing protein, expressed -
16 Sobic.006G244700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed K00794: ribH, 6,7-dimethyl-8-ribityllumazine synthase
17 Sobic.008G004600 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
18 Sobic.001G047400 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
19 Sobic.002G116900 expressed protein -
20 Sobic.001G261456 - -


Gene co-expression network
sample Sobic006G280600 Sobic006G280600 Sobic005G168600 Sobic005G168600 Sobic006G280600--Sobic005G168600 Sobic004G356900 Sobic004G356900 Sobic006G280600--Sobic004G356900 Sobic001G263000 Sobic001G263000 Sobic006G280600--Sobic001G263000 Sobic001G085100 Sobic001G085100 Sobic006G280600--Sobic001G085100 Sobic004G232800 Sobic004G232800 Sobic006G280600--Sobic004G232800 Sobic003G239800 Sobic003G239800 Sobic006G280600--Sobic003G239800 Sobic007G188300 Sobic007G188300 Sobic006G280600--Sobic007G188300 Sobic001G078800 Sobic001G078800 Sobic006G280600--Sobic001G078800 Sobic009G238850 Sobic009G238850 Sobic006G280600--Sobic009G238850 Sobic001G047400 Sobic001G047400 Sobic005G168600--Sobic001G047400 Sobic002G116900 Sobic002G116900 Sobic005G168600--Sobic002G116900 Sobic005G168600--Sobic001G085100 Sobic005G168600--Sobic006G280600 Sobic010G277100 Sobic010G277100 Sobic005G168600--Sobic010G277100 Sobic004G296400 Sobic004G296400 Sobic005G168600--Sobic004G296400 Sobic002G262900 Sobic002G262900 Sobic005G168600--Sobic002G262900 Sobic001G261436 Sobic001G261436 Sobic005G168600--Sobic001G261436 Sobic006G244700 Sobic006G244700 Sobic005G168600--Sobic006G244700 Sobic008G004400 Sobic008G004400 Sobic004G356900--Sobic008G004400 Sobic004G226800 Sobic004G226800 Sobic004G356900--Sobic004G226800 Sobic009G004600 Sobic009G004600 Sobic004G356900--Sobic009G004600 Sobic010G193800 Sobic010G193800 Sobic004G356900--Sobic010G193800 Sobic010G205300 Sobic010G205300 Sobic004G356900--Sobic010G205300 Sobic006G101700 Sobic006G101700 Sobic004G356900--Sobic006G101700 Sobic004G356900--Sobic004G232800 Sobic002G268400 Sobic002G268400 Sobic004G356900--Sobic002G268400 Sobic004G356900--Sobic003G239800 Sobic001G263000--Sobic009G004600 Sobic001G263000--Sobic006G244700 Sobic009G033900 Sobic009G033900 Sobic001G263000--Sobic009G033900 Sobic002G209400 Sobic002G209400 Sobic001G263000--Sobic002G209400 Sobic001G263000--Sobic002G268400 Sobic002G039000 Sobic002G039000 Sobic001G263000--Sobic002G039000 Sobic004G074300 Sobic004G074300 Sobic001G263000--Sobic004G074300 Sobic001G263000--Sobic004G356900 Sobic010G057900 Sobic010G057900 Sobic001G263000--Sobic010G057900 Sobic001G085100--Sobic006G101700 Sobic001G085100--Sobic001G261436 Sobic006G148200 Sobic006G148200 Sobic001G085100--Sobic006G148200 Sobic007G167900 Sobic007G167900 Sobic001G085100--Sobic007G167900 Sobic001G206900 Sobic001G206900 Sobic001G085100--Sobic001G206900 Sobic001G085100--Sobic001G047400 Sobic004G066200 Sobic004G066200 Sobic001G085100--Sobic004G066200 Sobic001G091300 Sobic001G091300 Sobic001G085100--Sobic001G091300 Sobic003G012200 Sobic003G012200 Sobic001G085100--Sobic003G012200 Sobic004G232800--Sobic010G205300 Sobic004G232800--Sobic004G356900 Sobic004G232800--Sobic009G004600 Sobic006G049700 Sobic006G049700 Sobic004G232800--Sobic006G049700 Sobic009G192000 Sobic009G192000 Sobic004G232800--Sobic009G192000 Sobic004G232800--Sobic010G057900 Sobic003G349300 Sobic003G349300 Sobic004G232800--Sobic003G349300 Sobic004G232800--Sobic004G226800 Sobic002G113900 Sobic002G113900 Sobic004G232800--Sobic002G113900 Sobic003G239800--Sobic004G356900 Sobic003G239800--Sobic009G004600 Sobic003G239800--Sobic010G205300 Sobic009G228800 Sobic009G228800 Sobic003G239800--Sobic009G228800 Sobic003G239800--Sobic004G232800 Sobic003G239800--Sobic006G280600 Sobic002G341800 Sobic002G341800 Sobic003G239800--Sobic002G341800 Sobic004G310500 Sobic004G310500 Sobic003G239800--Sobic004G310500 Sobic003G239800--Sobic007G188300 Sobic009G149500 Sobic009G149500 Sobic007G188300--Sobic009G149500 Sobic007G188300--Sobic001G085100 Sobic007G188300--Sobic010G205300 Sobic007G188300--Sobic006G244700 Sobic007G188300--Sobic001G263000 Sobic001G014800 Sobic001G014800 Sobic007G188300--Sobic001G014800 Sobic007G014900 Sobic007G014900 Sobic007G188300--Sobic007G014900 Sobic007G188300--Sobic004G356900 Sobic007G188300--Sobic002G209400 Sobic003G261400 Sobic003G261400 Sobic001G078800--Sobic003G261400 Sobic001G078800--Sobic010G205300 Sobic001G078800--Sobic010G057900 Sobic002G400000 Sobic002G400000 Sobic001G078800--Sobic002G400000 Sobic001G078800--Sobic001G085100 Sobic007G168600 Sobic007G168600 Sobic001G078800--Sobic007G168600 Sobic001G078800--Sobic001G206900 Sobic001G051200 Sobic001G051200 Sobic001G078800--Sobic001G051200 Sobic003G077900 Sobic003G077900 Sobic001G078800--Sobic003G077900 Sobic010G262000 Sobic010G262000 Sobic009G238850--Sobic010G262000 Sobic001G186800 Sobic001G186800 Sobic009G238850--Sobic001G186800 Sobic004G257100 Sobic004G257100 Sobic009G238850--Sobic004G257100 Sobic001G298600 Sobic001G298600 Sobic009G238850--Sobic001G298600 Sobic001G281600 Sobic001G281600 Sobic009G238850--Sobic001G281600 Sobic008G004600 Sobic008G004600 Sobic009G238850--Sobic008G004600 Sobic002G359400 Sobic002G359400 Sobic009G238850--Sobic002G359400 Sobic008G051200 Sobic008G051200 Sobic009G238850--Sobic008G051200 Sobic006G032900 Sobic006G032900 Sobic009G238850--Sobic006G032900
Octagon: transcription factors


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