Gene annotation
Transcriptome id Sobic.009G238850.1
Synonym -
Functional annotation -
UniProt A0A1Z5R3U3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G262000 tRNA-dihydrouridine synthase, putative, expressed K05542: tRNA-dihydrouridine synthase 1
2 Sobic.001G186800 ATPAP18/PAP18, putative, expressed -
3 Sobic.004G257100 transmembrane 9 superfamily member, putative, expressed -
4 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
5 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
6 Sobic.008G004600 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
7 Sobic.002G359400 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
8 Sobic.008G051200 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
9 Sobic.006G032900 endonuclease/exonuclease/phosphatase family protein, putative, expressed -
10 Sobic.006G280600 tubulin folding cofactor B, putative, expressed K17262: TBCB, CKAP1, tubulin-specific chaperone B
11 Sobic.004G356900 - K13025: EIF4A3, ATP-dependent RNA helicase
12 Sobic.009G046700 ranBP1 domain containing protein, expressed K15304: Ran-binding protein 3
13 Sobic.007G006900 shwachman-Bodian-Diamond syndrome protein, putative, expressed K14574: SDO1, ribosome maturation protein SDO1
14 Sobic.002G083900 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
15 Sobic.010G079900 AT hook-containing DNA-binding protein, putative, expressed -
16 Sobic.003G169600 mitochondrial carrier protein, putative, expressed K15115: SLC25A32, solute carrier family 25 (mitochondrial folate transporter), member 32
17 Sobic.004G232800 expressed protein -
18 Sobic.001G362200 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
19 Sobic.006G200600 expressed protein -
20 Sobic.006G130800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13


Gene co-expression network
sample Sobic009G238850 Sobic009G238850 Sobic010G262000 Sobic010G262000 Sobic009G238850--Sobic010G262000 Sobic001G186800 Sobic001G186800 Sobic009G238850--Sobic001G186800 Sobic004G257100 Sobic004G257100 Sobic009G238850--Sobic004G257100 Sobic001G298600 Sobic001G298600 Sobic009G238850--Sobic001G298600 Sobic001G281600 Sobic001G281600 Sobic009G238850--Sobic001G281600 Sobic008G004600 Sobic008G004600 Sobic009G238850--Sobic008G004600 Sobic002G359400 Sobic002G359400 Sobic009G238850--Sobic002G359400 Sobic008G051200 Sobic008G051200 Sobic009G238850--Sobic008G051200 Sobic006G032900 Sobic006G032900 Sobic009G238850--Sobic006G032900 Sobic010G262000--Sobic002G359400 Sobic001G392300 Sobic001G392300 Sobic010G262000--Sobic001G392300 Sobic010G262000--Sobic009G238850 Sobic004G140600 Sobic004G140600 Sobic010G262000--Sobic004G140600 Sobic010G143800 Sobic010G143800 Sobic010G262000--Sobic010G143800 Sobic006G200600 Sobic006G200600 Sobic010G262000--Sobic006G200600 Sobic005G027400 Sobic005G027400 Sobic010G262000--Sobic005G027400 Sobic010G262000--Sobic001G186800 Sobic001G080700 Sobic001G080700 Sobic010G262000--Sobic001G080700 Sobic002G294800 Sobic002G294800 Sobic001G186800--Sobic002G294800 Sobic004G021200 Sobic004G021200 Sobic001G186800--Sobic004G021200 Sobic003G141500 Sobic003G141500 Sobic001G186800--Sobic003G141500 Sobic001G186800--Sobic006G200600 Sobic001G186800--Sobic001G281600 Sobic003G138500 Sobic003G138500 Sobic001G186800--Sobic003G138500 Sobic001G186800--Sobic010G262000 Sobic009G199200 Sobic009G199200 Sobic001G186800--Sobic009G199200 Sobic001G186800--Sobic005G027400 Sobic004G131300 Sobic004G131300 Sobic004G257100--Sobic004G131300 Sobic001G251100 Sobic001G251100 Sobic004G257100--Sobic001G251100 Sobic004G092500 Sobic004G092500 Sobic004G257100--Sobic004G092500 Sobic006G073200 Sobic006G073200 Sobic004G257100--Sobic006G073200 Sobic005G172500 Sobic005G172500 Sobic004G257100--Sobic005G172500 Sobic004G257100--Sobic008G004600 Sobic001G227400 Sobic001G227400 Sobic004G257100--Sobic001G227400 Sobic008G112800 Sobic008G112800 Sobic004G257100--Sobic008G112800 Sobic004G257100--Sobic001G392300 Sobic007G132400 Sobic007G132400 Sobic001G298600--Sobic007G132400 Sobic006G228500 Sobic006G228500 Sobic001G298600--Sobic006G228500 Sobic004G121100 Sobic004G121100 Sobic001G298600--Sobic004G121100 Sobic001G107500 Sobic001G107500 Sobic001G298600--Sobic001G107500 Sobic002G310200 Sobic002G310200 Sobic001G298600--Sobic002G310200 Sobic006G273200 Sobic006G273200 Sobic001G298600--Sobic006G273200 Sobic009G215800 Sobic009G215800 Sobic001G298600--Sobic009G215800 Sobic003G176600 Sobic003G176600 Sobic001G298600--Sobic003G176600 Sobic001G298600--Sobic001G281600 Sobic010G279700 Sobic010G279700 Sobic001G281600--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic001G281600--Sobic007G078500 Sobic001G281600--Sobic006G200600 Sobic003G401100 Sobic003G401100 Sobic001G281600--Sobic003G401100 Sobic001G281600--Sobic004G121100 Sobic001G281600--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic001G281600--Sobic004G084300 Sobic009G050900 Sobic009G050900 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700 Sobic006G126100 Sobic006G126100 Sobic008G004600--Sobic006G126100 Sobic006G136400 Sobic006G136400 Sobic008G004600--Sobic006G136400 Sobic004G135400 Sobic004G135400 Sobic008G004600--Sobic004G135400 Sobic005G003300 Sobic005G003300 Sobic008G004600--Sobic005G003300 Sobic010G205800 Sobic010G205800 Sobic008G004600--Sobic010G205800 Sobic006G208500 Sobic006G208500 Sobic008G004600--Sobic006G208500 Sobic004G039600 Sobic004G039600 Sobic008G004600--Sobic004G039600 Sobic001G007000 Sobic001G007000 Sobic008G004600--Sobic001G007000 Sobic008G004600--Sobic002G359400 Sobic002G359400--Sobic001G007000 Sobic002G359400--Sobic001G392300 Sobic002G359400--Sobic010G262000 Sobic006G041600 Sobic006G041600 Sobic002G359400--Sobic006G041600 Sobic002G359400--Sobic008G004600 Sobic002G305000 Sobic002G305000 Sobic002G359400--Sobic002G305000 Sobic002G325300 Sobic002G325300 Sobic002G359400--Sobic002G325300 Sobic006G103200 Sobic006G103200 Sobic002G359400--Sobic006G103200 Sobic003G102400 Sobic003G102400 Sobic002G359400--Sobic003G102400 Sobic004G171200 Sobic004G171200 Sobic008G051200--Sobic004G171200 Sobic008G051200--Sobic001G251100 Sobic006G125900 Sobic006G125900 Sobic008G051200--Sobic006G125900 Sobic004G185800 Sobic004G185800 Sobic008G051200--Sobic004G185800 Sobic001G493200 Sobic001G493200 Sobic008G051200--Sobic001G493200 Sobic001G089600 Sobic001G089600 Sobic008G051200--Sobic001G089600 Sobic001G453400 Sobic001G453400 Sobic008G051200--Sobic001G453400 Sobic001G393900 Sobic001G393900 Sobic008G051200--Sobic001G393900 Sobic004G030800 Sobic004G030800 Sobic008G051200--Sobic004G030800 Sobic001G362200 Sobic001G362200 Sobic006G032900--Sobic001G362200 Sobic003G109700 Sobic003G109700 Sobic006G032900--Sobic003G109700 Sobic001G518400 Sobic001G518400 Sobic006G032900--Sobic001G518400 Sobic002G317300 Sobic002G317300 Sobic006G032900--Sobic002G317300 Sobic001G226700 Sobic001G226700 Sobic006G032900--Sobic001G226700 Sobic008G083000 Sobic008G083000 Sobic006G032900--Sobic008G083000 Sobic006G032900--Sobic003G401100 Sobic001G102700 Sobic001G102700 Sobic006G032900--Sobic001G102700 Sobic009G103600 Sobic009G103600 Sobic006G032900--Sobic009G103600
Octagon: transcription factors


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